Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027161
CDS Infomation

pacid=37479160 polypeptide=PGSC0003DMP400018534 locus=PGSC0003DMG401010480 ID=PGSC0003DMT400027161.v4.03 annot-version=v4.03
Sequence

ATGGACAAGAAGATATTATTTTTGTTTTTCTTCTGTATTACTCTGCACTTAGCAGCAATT
GTATCTGCTCAACTTCAAGTTGGTTTCTACAATACTAAAACTAGATGTCCAGCAGCAGAA
ACCATAGTTCGAGATACGGTGCGAAGCCGGTTTTCATCGGATCGTACCATCACAGCAGCA
TTGCTGCGAATGTATTTTCATGACTGCTTCGTGAGGGGTTGTGATGCATCGTTACTAATA
GACTCCAAAAACACGAAGAATAAGAAGTCAGAAAAAGATGCAGGAGCAAATGGATCGGTA
AGAGAATACGGGTTGATTGATCAAATAAAGAGTAAATTAGAAGCTACATGTCCTAATACA
GTGTCCTGTGCGGACATCATTGCATTAGCTACTCGAGATGCAGTTGCATTAGCTGGAGGA
CTGAACTACAGTATACCCACTGGCAGGCGCGATGGGCTAGTGTCTGACCCATCACAAGTG
AACCTGCCAGGCCCTAGTATAACCGTGCCACAAGCAATTCAAACTTTTCAAAGCAAAGGA
TTTAATGTGAATGAAATGGTGTCGCTTTTAGGTGGCCACACAGTGGGAATTACACATTGT
GGTTTTATTCAAGAGGATAGGCTATCGAGGGATGATGGAAGCATGGATAAGAATTTGTTT
ACTAGTCTTAGAAAGACGTGTAGTGCTAATGGTGGCTCGTCTGTGTTCTTGGATCAAAAC
ACTTCATTAGTTGTTGATAACTCTTTTTACAAACAACTGAAATTGAAGAAAGGAATATTG
AAGATTGATCAGTTACTTGAATCAGATAGATCAACTGCTGGGATTGTGACTACTTTTTCT
TCTAATCCAAATGCCTTCCAACAGGCTTTTGCGAATGCATTGATCAAGTTGGGTAACACT
CAAGTTCTTGTGGGGAAATCAGGTGAAGTTAGAAAAAATTGTAGAGCATTTAATCCTCCT
CCAGTTCGCAGTAGTAATCCATTCCTCTTTGTGTTTGGCCCACAAGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400018534
PEP Infomation

pacid=37479160 transcript=PGSC0003DMT400027161 locus=PGSC0003DMG401010480 ID=PGSC0003DMT400027161.v4.03 annot-version=v4.03
Sequence

MDKKILFLFFFCITLHLAAIVSAQLQVGFYNTKTRCPAAETIVRDTVRSRFSSDRTITAA
LLRMYFHDCFVRGCDASLLIDSKNTKNKKSEKDAGANGSVREYGLIDQIKSKLEATCPNT
VSCADIIALATRDAVALAGGLNYSIPTGRRDGLVSDPSQVNLPGPSITVPQAIQTFQSKG
FNVNEMVSLLGGHTVGITHCGFIQEDRLSRDDGSMDKNLFTSLRKTCSANGGSSVFLDQN
TSLVVDNSFYKQLKLKKGILKIDQLLESDRSTAGIVTTFSSNPNAFQQAFANALIKLGNT
QVLVGKSGEVRKNCRAFNPPPVRSSNPFLFVFGPQA*

Transcript Sequence

Transcript ID

PGSC0003DMT400027161
Transcript Infomation

pacid=37479160 locus=PGSC0003DMG401010480 ID=PGSC0003DMT400027161.v4.03 annot-version=v4.03
Sequence

ATGGACAAGAAGATATTATTTTTGTTTTTCTTCTGTATTACTCTGCACTTAGCAGCAATT
GTATCTGCTCAACTTCAAGTTGGTTTCTACAATACTAAAACTAGATGTCCAGCAGCAGAA
ACCATAGTTCGAGATACGGTGCGAAGCCGGTTTTCATCGGATCGTACCATCACAGCAGCA
TTGCTGCGAATGTATTTTCATGACTGCTTCGTGAGGGGTTGTGATGCATCGTTACTAATA
GACTCCAAAAACACGAAGAATAAGAAGTCAGAAAAAGATGCAGGAGCAAATGGATCGGTA
AGAGAATACGGGTTGATTGATCAAATAAAGAGTAAATTAGAAGCTACATGTCCTAATACA
GTGTCCTGTGCGGACATCATTGCATTAGCTACTCGAGATGCAGTTGCATTAGCTGGAGGA
CTGAACTACAGTATACCCACTGGCAGGCGCGATGGGCTAGTGTCTGACCCATCACAAGTG
AACCTGCCAGGCCCTAGTATAACCGTGCCACAAGCAATTCAAACTTTTCAAAGCAAAGGA
TTTAATGTGAATGAAATGGTGTCGCTTTTAGGTGGCCACACAGTGGGAATTACACATTGT
GGTTTTATTCAAGAGGATAGGCTATCGAGGGATGATGGAAGCATGGATAAGAATTTGTTT
ACTAGTCTTAGAAAGACGTGTAGTGCTAATGGTGGCTCGTCTGTGTTCTTGGATCAAAAC
ACTTCATTAGTTGTTGATAACTCTTTTTACAAACAACTGAAATTGAAGAAAGGAATATTG
AAGATTGATCAGTTACTTGAATCAGATAGATCAACTGCTGGGATTGTGACTACTTTTTCT
TCTAATCCAAATGCCTTCCAACAGGCTTTTGCGAATGCATTGATCAAGTTGGGTAACACT
CAAGTTCTTGTGGGGAAATCAGGTGAAGTTAGAAAAAATTGTAGAGCATTTAATCCTCCT
CCAGTTCGCAGTAGTAATCCATTCCTCTTTGTGTTTGGCCCACAAGCTTAA