Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027159
CDS Infomation

pacid=37477653 polypeptide=PGSC0003DMP400018532 locus=PGSC0003DMG400010478 ID=PGSC0003DMT400027159.v4.03 annot-version=v4.03
Sequence

ATGATGTCTGGAGATGTGTTTTCATTTCCTTCTTCTGTTAAAGCAGTACTTCCTCATCAT
CATCAAGAACTTCAAACAACAAACCCTAACCCTAAACCTAATACTTCTTCAAAGAAAAGA
AGAAATCTTCCAGGAACACCAGATCCAGATGCTGAAGTTATTGCACTTTCACCAAAGTCA
CTCATGGCAACAAACAGATTCATATGTGAGATTTGCAACAAAGGTTTTCAAAGGGACCAG
AATTTGCAACTTCATAGAAGAGGACACAATCTTCCATGGAAGCTAAAGCAAAGAAACAAG
CTAGAACAAGTGAAGAAGAAAGTGTATATTTGTCCAGAAAAGACATGTATTCACCACGAT
CCATCGCGTGCACTTGGAGACCTAACTGGAATTAAGAAACATTTTAGTAGAAAACATGGA
GAAAAGAAGTGGAAATGTGAAAAATGTTCAAAGAAATATGCAGTTCAATCAGATTGGAAA
GCTCATAGTAAAACTTGTGGAACTAGAGAGTACAAATGTGACTGTGGCACACTCTTTTCA
AGAAAAGACAGTTTTATCACACACAGAGCTTTCTGTGATGCTTTAGCTGAGGAGAGTTCA
AGAATCACATCAGTTGGGGCTACCAATTTGATCAACTTCCCAAATAATGTCACATTGTTG
AACCAACAACAATCAAATTTACATGGCGGATTCGCAGGATTTAGATCAGATTTTGGTAGT
TACACAACTGGTAATAATAATAATTCTCTTCATCAGCATCAGCATCAGCAGCAACAGCAA
AAACCAAGATTATCACTTTGGTTAGATCAACAAGCAGCTCAAATATCGTCAAGTTCAAAT
CTTTTTGACAATTCAAGCACAGGGGGTTTTCAAGAAATGATCCAAATGCAATCCCAAAAT
GTATTTGGATCATCTAATTCAACATCTGCAAACTTTTCAATGGCTGAAGCATACAATTCT
CTGTATTCCGATAGTCAAAACAGCCAATTAACCAAACAAAATTCGACCACGCCAATGTCT
GCTACTGCACTTCTACAGAAAGCAGCACAAATGGGTTCTACAAAAAGCAATCAGTCAACT
TTCTTTAGCAACAATTTCAGCAAACTGAACTCTTCTTCTTCATCCTCCCCAAATACACCA
ACTTTTACCAGTTTACAGAGTTGTGAAACAACAGATCAAATTTTCGCCAAGAAATCTGAA
GATTACACAACGTCGTTGTTACACAGCAACAACGGGCTAATTGGGTGTCCGAATTTTACT
TCTTCAGGGATTAATAAAGCGATTAATTTGGATGAGGCAATTATGCAAACAGTTGGTATG
CATAGTACTCAAGCAGTTTCAATGAACGGTATGGATAATTGTTTGACGAGAGATTTTTTG
GGAATTAAACACGAAGGGAATTGTCAGTTTTTGCCACAAGAGATTATTAAGTTTGCATCG
ATGAATAGTTCAGCTATGGGGTTAAGCCATTTACAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400018532
PEP Infomation

pacid=37477653 transcript=PGSC0003DMT400027159 locus=PGSC0003DMG400010478 ID=PGSC0003DMT400027159.v4.03 annot-version=v4.03
Sequence

MMSGDVFSFPSSVKAVLPHHHQELQTTNPNPKPNTSSKKRRNLPGTPDPDAEVIALSPKS
LMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKLEQVKKKVYICPEKTCIHHD
PSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFS
RKDSFITHRAFCDALAEESSRITSVGATNLINFPNNVTLLNQQQSNLHGGFAGFRSDFGS
YTTGNNNNSLHQHQHQQQQQKPRLSLWLDQQAAQISSSSNLFDNSSTGGFQEMIQMQSQN
VFGSSNSTSANFSMAEAYNSLYSDSQNSQLTKQNSTTPMSATALLQKAAQMGSTKSNQST
FFSNNFSKLNSSSSSSPNTPTFTSLQSCETTDQIFAKKSEDYTTSLLHSNNGLIGCPNFT
SSGINKAINLDEAIMQTVGMHSTQAVSMNGMDNCLTRDFLGIKHEGNCQFLPQEIIKFAS
MNSSAMGLSHLQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400027159
Transcript Infomation

pacid=37477653 locus=PGSC0003DMG400010478 ID=PGSC0003DMT400027159.v4.03 annot-version=v4.03
Sequence

ATGATGTCTGGAGATGTGTTTTCATTTCCTTCTTCTGTTAAAGCAGTACTTCCTCATCAT
CATCAAGAACTTCAAACAACAAACCCTAACCCTAAACCTAATACTTCTTCAAAGAAAAGA
AGAAATCTTCCAGGAACACCAGATCCAGATGCTGAAGTTATTGCACTTTCACCAAAGTCA
CTCATGGCAACAAACAGATTCATATGTGAGATTTGCAACAAAGGTTTTCAAAGGGACCAG
AATTTGCAACTTCATAGAAGAGGACACAATCTTCCATGGAAGCTAAAGCAAAGAAACAAG
CTAGAACAAGTGAAGAAGAAAGTGTATATTTGTCCAGAAAAGACATGTATTCACCACGAT
CCATCGCGTGCACTTGGAGACCTAACTGGAATTAAGAAACATTTTAGTAGAAAACATGGA
GAAAAGAAGTGGAAATGTGAAAAATGTTCAAAGAAATATGCAGTTCAATCAGATTGGAAA
GCTCATAGTAAAACTTGTGGAACTAGAGAGTACAAATGTGACTGTGGCACACTCTTTTCA
AGAAAAGACAGTTTTATCACACACAGAGCTTTCTGTGATGCTTTAGCTGAGGAGAGTTCA
AGAATCACATCAGTTGGGGCTACCAATTTGATCAACTTCCCAAATAATGTCACATTGTTG
AACCAACAACAATCAAATTTACATGGCGGATTCGCAGGATTTAGATCAGATTTTGGTAGT
TACACAACTGGTAATAATAATAATTCTCTTCATCAGCATCAGCATCAGCAGCAACAGCAA
AAACCAAGATTATCACTTTGGTTAGATCAACAAGCAGCTCAAATATCGTCAAGTTCAAAT
CTTTTTGACAATTCAAGCACAGGGGGTTTTCAAGAAATGATCCAAATGCAATCCCAAAAT
GTATTTGGATCATCTAATTCAACATCTGCAAACTTTTCAATGGCTGAAGCATACAATTCT
CTGTATTCCGATAGTCAAAACAGCCAATTAACCAAACAAAATTCGACCACGCCAATGTCT
GCTACTGCACTTCTACAGAAAGCAGCACAAATGGGTTCTACAAAAAGCAATCAGTCAACT
TTCTTTAGCAACAATTTCAGCAAACTGAACTCTTCTTCTTCATCCTCCCCAAATACACCA
ACTTTTACCAGTTTACAGAGTTGTGAAACAACAGATCAAATTTTCGCCAAGAAATCTGAA
GATTACACAACGTCGTTGTTACACAGCAACAACGGGCTAATTGGGTGTCCGAATTTTACT
TCTTCAGGGATTAATAAAGCGATTAATTTGGATGAGGCAATTATGCAAACAGTTGGTATG
CATAGTACTCAAGCAGTTTCAATGAACGGTATGGATAATTGTTTGACGAGAGATTTTTTG
GGAATTAAACACGAAGGGAATTGTCAGTTTTTGCCACAAGAGATTATTAAGTTTGCATCG
ATGAATAGTTCAGCTATGGGGTTAAGCCATTTACAGTAA