Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027134
CDS Infomation

pacid=37477185 polypeptide=PGSC0003DMP400018512 locus=PGSC0003DMG400010467 ID=PGSC0003DMT400027134.v4.03 annot-version=v4.03
Sequence

ATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAGTTGGCAAT
GCTGCAGCACAGCGAAGACGGCAACATGCTGTTACAGTGGGGAAGGAAAGGAGAGAAGCC
CTGATGCGTACAAAGCGGCTATGCAGAGTGGGAGTTAGTGGTGATTTTGATGAGGCCTCT
ATTGATGATAGTGATATGATGATTGAAGAAGATCAAGCAATTTTGGAGGCCTTGACTTCG
GCAGCTGTGGAAGAATTAAAACTTGATGTTGCCTACCAGGGTAAAGGGGCAACAGAGAAA
AGGGTGAATGCTCTTCGTGAGCTGAGACGCTTTCTCTCTAGGTCGGAATTCCCTCCTGTT
GAAGCTGCCCTACAGGCTGGAGCTATACCTCTTCTTATTCAGTGTCTTTCATTTGGCTCT
CCAGATGAACAGTTGCTTGAGGCTGCTTGGTGCCTAACTAATATTGCTGCTGGAAAACCC
GAGGAAACCAAAGCTTTGTTGCCTGCATTACCATTGCTTGTGGCTCATCTAGGAGAGAAG
AGTTCCTTACATGTCGTGGAGCAGTGTGCATGGGCATTGGGAAATGTTGCTGGTGAAAGT
GAAGAGCTGAGAAATGTTCTCCTATTACAAGGAGCCTTACCAGCTCTTGCAAGGATGCTG
CTGCCTAACAAGAGGTCAACAGTGAGAACAGCTGCTTGGGCATTATCAAACCTAATCAAG
GGACCAGATCCTAGAGCTGCAACAGAGTTGATAAAAATTGATGGAATACCTGATAGAATT
GTTCGACATTTAAAGAAAGGGGATGATGAGTTGGCCACTGAAGTAGCATGGGTTGTTGTG
TATCTCACTGCCCTTTCAAATGTTGCAACTACAATACTGGCAAAGAGTGATCTCGTACAA
GTACTGGTAGAAATATTGGACATGTCAACTAGTCTGCAACTGCTTATCCCGGTGCTGCGG
AGCTTGGGAAATCTTGTGGCTGGTGAACCTCATATAACTAATTTTGTTCTTGTTGTGAGA
CATGCGCTAACAGGTGATGCCATCCAAGCACTAGTAAAGTGCTTAAAGAGTGAACACCGC
ATCTTGAATAAGGAAGCTGCATGGGTGCTATCTAATATAGCTGCTGGTTCAGTGGAGCAT
AAGCGGTTGATATATTCAAGTGAAGCTATGCCGCTTCTTTTAAATCTTCTTTCTAAAGCT
GCATTTGACATAAAAAAGGAGGTAGCGTATGTCCTGGGAAACATCTGTGTTGCCCCTGCT
GAAGGTTCTGGAAGGCCAAATGTGATTCTTGACCACTTGGTCAATCTTGTTCATGGAGGA
TGCCTAACTGGTTTTCTGGATTTGGTAAGATCTGCTGATGTTGAGGCAGCGAGATTGGGA
CTGCAATTCATTGAGCTGGTCTTGAGAGGAATGCCAAATGGAGAGGGTCCGAAGCTCGTT
GAAAGGGAAGATGGTATTGATGCAATGGAAAGATATCAATTTCATGAAAATGAAGAACTC
AGGAGCATGGCGAACGAGCTGGTTGATAGTTATTTCGGAGAAGAATATGGGCTTGATGAA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400018512
PEP Infomation

pacid=37477185 transcript=PGSC0003DMT400027134 locus=PGSC0003DMG400010467 ID=PGSC0003DMT400027134.v4.03 annot-version=v4.03
Sequence

MADEGLVSHKRDPIKASVGNAAAQRRRQHAVTVGKERREALMRTKRLCRVGVSGDFDEAS
IDDSDMMIEEDQAILEALTSAAVEELKLDVAYQGKGATEKRVNALRELRRFLSRSEFPPV
EAALQAGAIPLLIQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKALLPALPLLVAHLGEK
SSLHVVEQCAWALGNVAGESEELRNVLLLQGALPALARMLLPNKRSTVRTAAWALSNLIK
GPDPRAATELIKIDGIPDRIVRHLKKGDDELATEVAWVVVYLTALSNVATTILAKSDLVQ
VLVEILDMSTSLQLLIPVLRSLGNLVAGEPHITNFVLVVRHALTGDAIQALVKCLKSEHR
ILNKEAAWVLSNIAAGSVEHKRLIYSSEAMPLLLNLLSKAAFDIKKEVAYVLGNICVAPA
EGSGRPNVILDHLVNLVHGGCLTGFLDLVRSADVEAARLGLQFIELVLRGMPNGEGPKLV
EREDGIDAMERYQFHENEELRSMANELVDSYFGEEYGLDE*

Transcript Sequence

Transcript ID

PGSC0003DMT400027134
Transcript Infomation

pacid=37477185 locus=PGSC0003DMG400010467 ID=PGSC0003DMT400027134.v4.03 annot-version=v4.03
Sequence

ATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAGTTGGCAAT
GCTGCAGCACAGCGAAGACGGCAACATGCTGTTACAGTGGGGAAGGAAAGGAGAGAAGCC
CTGATGCGTACAAAGCGGCTATGCAGAGTGGGAGTTAGTGGTGATTTTGATGAGGCCTCT
ATTGATGATAGTGATATGATGATTGAAGAAGATCAAGCAATTTTGGAGGCCTTGACTTCG
GCAGCTGTGGAAGAATTAAAACTTGATGTTGCCTACCAGGGTAAAGGGGCAACAGAGAAA
AGGGTGAATGCTCTTCGTGAGCTGAGACGCTTTCTCTCTAGGTCGGAATTCCCTCCTGTT
GAAGCTGCCCTACAGGCTGGAGCTATACCTCTTCTTATTCAGTGTCTTTCATTTGGCTCT
CCAGATGAACAGTTGCTTGAGGCTGCTTGGTGCCTAACTAATATTGCTGCTGGAAAACCC
GAGGAAACCAAAGCTTTGTTGCCTGCATTACCATTGCTTGTGGCTCATCTAGGAGAGAAG
AGTTCCTTACATGTCGTGGAGCAGTGTGCATGGGCATTGGGAAATGTTGCTGGTGAAAGT
GAAGAGCTGAGAAATGTTCTCCTATTACAAGGAGCCTTACCAGCTCTTGCAAGGATGCTG
CTGCCTAACAAGAGGTCAACAGTGAGAACAGCTGCTTGGGCATTATCAAACCTAATCAAG
GGACCAGATCCTAGAGCTGCAACAGAGTTGATAAAAATTGATGGAATACCTGATAGAATT
GTTCGACATTTAAAGAAAGGGGATGATGAGTTGGCCACTGAAGTAGCATGGGTTGTTGTG
TATCTCACTGCCCTTTCAAATGTTGCAACTACAATACTGGCAAAGAGTGATCTCGTACAA
GTACTGGTAGAAATATTGGACATGTCAACTAGTCTGCAACTGCTTATCCCGGTGCTGCGG
AGCTTGGGAAATCTTGTGGCTGGTGAACCTCATATAACTAATTTTGTTCTTGTTGTGAGA
CATGCGCTAACAGGTGATGCCATCCAAGCACTAGTAAAGTGCTTAAAGAGTGAACACCGC
ATCTTGAATAAGGAAGCTGCATGGGTGCTATCTAATATAGCTGCTGGTTCAGTGGAGCAT
AAGCGGTTGATATATTCAAGTGAAGCTATGCCGCTTCTTTTAAATCTTCTTTCTAAAGCT
GCATTTGACATAAAAAAGGAGGTAGCGTATGTCCTGGGAAACATCTGTGTTGCCCCTGCT
GAAGGTTCTGGAAGGCCAAATGTGATTCTTGACCACTTGGTCAATCTTGTTCATGGAGGA
TGCCTAACTGGTTTTCTGGATTTGGTAAGATCTGCTGATGTTGAGGCAGCGAGATTGGGA
CTGCAATTCATTGAGCTGGTCTTGAGAGGAATGCCAAATGGAGAGGGTCCGAAGCTCGTT
GAAAGGGAAGATGGTATTGATGCAATGGAAAGATATCAATTTCATGAAAATGAAGAACTC
AGGAGCATGGCGAACGAGCTGGTTGATAGTTATTTCGGAGAAGAATATGGGCTTGATGAA
TAA