Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027083
CDS Infomation

pacid=37428968 polypeptide=PGSC0003DMP400018472 locus=PGSC0003DMG400010445 ID=PGSC0003DMT400027083.v4.03 annot-version=v4.03
Sequence

ATGGATAGAAATGTTGGAAAAGGCATGATGGGACAGCAGAACTATGAACAAGGCCGCTAT
GGCTCCGTGGAGACTAGAAATGAGGTCATTGGTTCTACAAATCAGAGATTCTTCCAGGAT
CCATCCAGTTCTATTAATACTAACATAAGACCTCCTGATTCCACTGTACCTGTTGGAGCT
AGGCCTGTAAATTATTCTATTCAGACTGGTGAGGAGTTTTCTTTGGAATTCATGCGGGGG
GTTAACCCTAAGCAGCATCTCGTTCCACATGCATCTGGTGGGACTACTGGTGCAACTTCT
TATATGGACCTGAAGGACATACTTGGAATATCTCATACAGGTTCTGAAAGCGGATCAGAT
ATCTCCATGATTGCCTCAATGGGAAAAGGTCGAGATCAAAATCATGAGAGATCTAGGACT
TCTGCAAATGATGAGAAATCCTGCCACCAAGTTGCACAATCTGTGGCCAGAACCTCATCA
AGAAATAACAACATCCGTGGGTATCAAAGTCATTTATCTTCTAGATCTAGCACATCAGGA
AAGTTGAGGTTTCTCTGCAGTTTTGGCGGTAGAATTATGCCTCGTCCAAGTGATAGAAAA
CTTAGATATGTTGGAGGTGATACACATCTCACTCGGGTCAGTAAGGATATTTCTTATGAC
GAGCTTATGCAGAAGATGTTGACAATATATAGTAATGTGCATACAGTAAAATATCAGCTT
CCTGGTGAGGATCTTGATGCATTGGTGTCAGTTTCTTGTGATGAGGATGTGCAGAATATG
ATAGAGGAATGTCATGTTCAAGAAGGTGATGGATCACACAAACTGCGAATTTTTCTCTTC
TCTAACAGTGACTTGGATGATGCTCAAGCTGGTGTTGAGAATGTTGAGGGAGATCTAGAG
ATGCAGTATGTTGTTGCTGTCAATGGCATGGACTTCGGGTCTAGAAGAAACTCAATTGCT
CTGGCAAGTGCTTCAGGAAATAATCTTGATGAGTTTCTTAGTTTAACAATTGGTCAGGAG
AATGGTCGAGTTGCTGCTGATGCTTCTCATCCAGTGGCTGGTGTGCCTCTAACTGGTCAA
TCTGCTCATGTGATGGAGTCAAGTTCATTACATGCCTTTGACTCCAAGCAACAAGGGTAC
CATGGTCAAACTATTCATCATGGCGGTGCTGAATGGAGACCTTTACCCCCTTCCATGCCT
GTTGACAACTTCCAAAATTTAGATGCCAAAAACACTGGTTTGCTGCAGTATGGGCATGAT
CCTCATCCACCTAACTCCTCACAACTCGGAGATAACTTTGTTGTTAGTTCTAGCCACAGT
TACCTGAATGGGGATGGAGGTTCAACTCACGAACAGCCATATAGAAGTTCACATATGAAC
GGCCAAGAAGCACCAGCTGAAGTGGTAAAAATGAAAAGAGACACCTCTTTCCAGAAGAAA
GTTGAACTTGCTAAAGATCAATCTCTGGAAAAGGAAATGCTTAAGGAGGCAAAGATGAAA
AGAGAAAACTCTGCACAGAAATTGAATGAGCCTGAGAAAATGCGATCGGTGGAAACTGAA
AAAGCTGTTTCCTTGAATTCACTTGTTAGTTCTGCTCCAAGTCACGTTTCCCGAGTTGAA
GCATCAAATTCTGCTGCTACGGCAGTTCCTGGAAATTCTGTCGTGCCTTCTAAAATTAAT
GAGAAGAGTCAGGAACAAGTGCAAGGCACAGTGTCTCTTGGATCTGTTCAAGAAGAAAAA
CCCGATGGATATAGTGAAGATAGCCACTTTTCGGCATCTGGTAGAACTTTGAACGCAGGC
TATGGTGACTCTGAAGTATGCCCATATGACCTTAGCTACGAGCCACCTTCAATGCCTCCA
CGAGTTTTTTGTTCTGAACGTTTGCCCAGGGAACAGGCTGGCCTAAATCGCTTGTCCAAA
TCTGATGATTCCTCTGCTGCACAGTTCATAATGACCCACGCACACTCTGAAGGCAGCCAG
CAGATCCTGGAATCAGTTGATAAATTACATGATGTTGGGAGATTTATACAGTCCGATAAG
AATCTGTCTGCTAATCAACCTGTTACCGAAGAGAAAAAGGTTGAACATCAGCAGTCTATA
GAGTTAGGTGACAATGCCAAGGGAGTTCATTCAAAAGTCGGTCAAGATGTTTCTGAAGCA
AATCTTGAGAAGCCCGAACTGAAAGCAGCAACTTATGCCGATAAAGTGAAATCTGGACCT
AGTAATCCTATCACTAGCAATAATGTTCATGACGTATCTGCTTCCAAGCCAACAGAGCTT
CATTGGGGTGATGCAGCTGCAAATAGACCAGAGGAAAATAAAGCTATGGGGCAAACACAG
CCTCTAGCTGAGAGAGAGCCTCAAATTGCAGCAGCAGCCACAGGGAAGCCATCTGCTACC
AGTGGCTCTCCTGAGCATGGTGACATTCTTATTGACATTAATGACCACTATCCCCGAGAG
TTCCTCTCTGATATTTTTTCCAAAGCTAAAATAATGGGTGATTCATCAGTGCCAGCTCTA
CTGCGTGCTGATGGAACTGGTTTGAGTTTAAATATGGAGAACCATGAACCAAAGCGCTGG
TCTTATTTTCAAAAGTTTGTCCGAGATGATTATGTCAGAAAAGACGTGTCTCTGATAGAC
CAGGATCATCTGAGTCTCTCTTCTTCTCGTGCAAATGTTGATGATGGAGCATCCATGGAT
TATGGTTATCCTCCTTTTAAGGGCGGTGGAGCTATGATAGACCATATGGACTCCCGAATG
AATATTGAAGGTGATATTCAACATCCATCGCGCGATGATGTTGGACCATCCACCATGAAT
GTGCCTTCAGACTACAATCCTACTCAAACCACAGGCATCCAAAGCATGCAGTATGACGGT
GCAATGCATTCAAAAATACCCGAATCCGATTATCAGGATGAGAACCAAGAAGTTCAGGAT
ACTGGTTTTCCACTCATCGATCTCTCTATGGGAGGTTTTGATCCAAACTCATTGCAGATT
ATCAAGAATGAAGATCTTGAGGAGTTGAGGGAATTAGGTTCTGGAACATTTGGAACTGTT
TACCATGGAAAATGGAGAGGAACTGATGTTGCCATAAAGAGAATCAAGAAAAGTTGTTTC
ACAGGCCGCTCATCAGAGCAGGAGAGACTGACTCTAGAGTTTTGGCGTGAAGCTGAAATT
CTTTCAAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTAGTGCAAGATGGGCCA
GGGGGAACTCTTGCAACATTAACAGAATTCATGGTGAATGGGTCTCTCAGACATGTTTTG
CTTTGCAAGGATAGACACCTAGATCGCCGCAAGAAGCTCATAATTGCAATGGATGCTGCA
TTTGGAATGGAATATCTGCATTCAAAGAATATTGTACATTTTGATTTGAAATGTGACAAT
TTGCTTGTCAACTTAAAAGATCCTTCTCGACCCATCTGTAAGGTTGGTGATTTTGGACTT
TCAAAAATAAAGAGAAATACGTTGGTCACTGGTGGTGTTAGGGGAACCCTTCCATGGATG
GCTCCCGAGTTATTGAATGGTAGCAGTAATAAGGTTTCTGAGAAGGTTGATGTTTTTTCC
TTTGGGATTGTGCTCTGGGAAATTCTGACTGGCGAGGAACCCTATGCTAATATGCATTAT
GGAGCAATTATAGGTGGTATAGTCAACAACACCTTGAGACCACCTGTTCCGAGCTTCTGC
GATCCTGAGTGGAGAATTCTTATGGAACAGTGCTGGGCTCCAGACCCTTCTGTTCGGCCA
TGCTTCACCGAAATTGCCAGACGTTTGCGTGCTATGTCTGCGGCATGCCCAACAAGACCA
CAAGCTCATCCACCTCAAAACCAACAGCCTAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400018472
PEP Infomation

pacid=37428968 transcript=PGSC0003DMT400027083 locus=PGSC0003DMG400010445 ID=PGSC0003DMT400027083.v4.03 annot-version=v4.03
Sequence

MDRNVGKGMMGQQNYEQGRYGSVETRNEVIGSTNQRFFQDPSSSINTNIRPPDSTVPVGA
RPVNYSIQTGEEFSLEFMRGVNPKQHLVPHASGGTTGATSYMDLKDILGISHTGSESGSD
ISMIASMGKGRDQNHERSRTSANDEKSCHQVAQSVARTSSRNNNIRGYQSHLSSRSSTSG
KLRFLCSFGGRIMPRPSDRKLRYVGGDTHLTRVSKDISYDELMQKMLTIYSNVHTVKYQL
PGEDLDALVSVSCDEDVQNMIEECHVQEGDGSHKLRIFLFSNSDLDDAQAGVENVEGDLE
MQYVVAVNGMDFGSRRNSIALASASGNNLDEFLSLTIGQENGRVAADASHPVAGVPLTGQ
SAHVMESSSLHAFDSKQQGYHGQTIHHGGAEWRPLPPSMPVDNFQNLDAKNTGLLQYGHD
PHPPNSSQLGDNFVVSSSHSYLNGDGGSTHEQPYRSSHMNGQEAPAEVVKMKRDTSFQKK
VELAKDQSLEKEMLKEAKMKRENSAQKLNEPEKMRSVETEKAVSLNSLVSSAPSHVSRVE
ASNSAATAVPGNSVVPSKINEKSQEQVQGTVSLGSVQEEKPDGYSEDSHFSASGRTLNAG
YGDSEVCPYDLSYEPPSMPPRVFCSERLPREQAGLNRLSKSDDSSAAQFIMTHAHSEGSQ
QILESVDKLHDVGRFIQSDKNLSANQPVTEEKKVEHQQSIELGDNAKGVHSKVGQDVSEA
NLEKPELKAATYADKVKSGPSNPITSNNVHDVSASKPTELHWGDAAANRPEENKAMGQTQ
PLAEREPQIAAAATGKPSATSGSPEHGDILIDINDHYPREFLSDIFSKAKIMGDSSVPAL
LRADGTGLSLNMENHEPKRWSYFQKFVRDDYVRKDVSLIDQDHLSLSSSRANVDDGASMD
YGYPPFKGGGAMIDHMDSRMNIEGDIQHPSRDDVGPSTMNVPSDYNPTQTTGIQSMQYDG
AMHSKIPESDYQDENQEVQDTGFPLIDLSMGGFDPNSLQIIKNEDLEELRELGSGTFGTV
YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGP
GGTLATLTEFMVNGSLRHVLLCKDRHLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDN
LLVNLKDPSRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFS
FGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPSFCDPEWRILMEQCWAPDPSVRP
CFTEIARRLRAMSAACPTRPQAHPPQNQQPK*

Transcript Sequence

Transcript ID

PGSC0003DMT400027083
Transcript Infomation

pacid=37428968 locus=PGSC0003DMG400010445 ID=PGSC0003DMT400027083.v4.03 annot-version=v4.03
Sequence

ATGGATAGAAATGTTGGAAAAGGCATGATGGGACAGCAGAACTATGAACAAGGCCGCTAT
GGCTCCGTGGAGACTAGAAATGAGGTCATTGGTTCTACAAATCAGAGATTCTTCCAGGAT
CCATCCAGTTCTATTAATACTAACATAAGACCTCCTGATTCCACTGTACCTGTTGGAGCT
AGGCCTGTAAATTATTCTATTCAGACTGGTGAGGAGTTTTCTTTGGAATTCATGCGGGGG
GTTAACCCTAAGCAGCATCTCGTTCCACATGCATCTGGTGGGACTACTGGTGCAACTTCT
TATATGGACCTGAAGGACATACTTGGAATATCTCATACAGGTTCTGAAAGCGGATCAGAT
ATCTCCATGATTGCCTCAATGGGAAAAGGTCGAGATCAAAATCATGAGAGATCTAGGACT
TCTGCAAATGATGAGAAATCCTGCCACCAAGTTGCACAATCTGTGGCCAGAACCTCATCA
AGAAATAACAACATCCGTGGGTATCAAAGTCATTTATCTTCTAGATCTAGCACATCAGGA
AAGTTGAGGTTTCTCTGCAGTTTTGGCGGTAGAATTATGCCTCGTCCAAGTGATAGAAAA
CTTAGATATGTTGGAGGTGATACACATCTCACTCGGGTCAGTAAGGATATTTCTTATGAC
GAGCTTATGCAGAAGATGTTGACAATATATAGTAATGTGCATACAGTAAAATATCAGCTT
CCTGGTGAGGATCTTGATGCATTGGTGTCAGTTTCTTGTGATGAGGATGTGCAGAATATG
ATAGAGGAATGTCATGTTCAAGAAGGTGATGGATCACACAAACTGCGAATTTTTCTCTTC
TCTAACAGTGACTTGGATGATGCTCAAGCTGGTGTTGAGAATGTTGAGGGAGATCTAGAG
ATGCAGTATGTTGTTGCTGTCAATGGCATGGACTTCGGGTCTAGAAGAAACTCAATTGCT
CTGGCAAGTGCTTCAGGAAATAATCTTGATGAGTTTCTTAGTTTAACAATTGGTCAGGAG
AATGGTCGAGTTGCTGCTGATGCTTCTCATCCAGTGGCTGGTGTGCCTCTAACTGGTCAA
TCTGCTCATGTGATGGAGTCAAGTTCATTACATGCCTTTGACTCCAAGCAACAAGGGTAC
CATGGTCAAACTATTCATCATGGCGGTGCTGAATGGAGACCTTTACCCCCTTCCATGCCT
GTTGACAACTTCCAAAATTTAGATGCCAAAAACACTGGTTTGCTGCAGTATGGGCATGAT
CCTCATCCACCTAACTCCTCACAACTCGGAGATAACTTTGTTGTTAGTTCTAGCCACAGT
TACCTGAATGGGGATGGAGGTTCAACTCACGAACAGCCATATAGAAGTTCACATATGAAC
GGCCAAGAAGCACCAGCTGAAGTGGTAAAAATGAAAAGAGACACCTCTTTCCAGAAGAAA
GTTGAACTTGCTAAAGATCAATCTCTGGAAAAGGAAATGCTTAAGGAGGCAAAGATGAAA
AGAGAAAACTCTGCACAGAAATTGAATGAGCCTGAGAAAATGCGATCGGTGGAAACTGAA
AAAGCTGTTTCCTTGAATTCACTTGTTAGTTCTGCTCCAAGTCACGTTTCCCGAGTTGAA
GCATCAAATTCTGCTGCTACGGCAGTTCCTGGAAATTCTGTCGTGCCTTCTAAAATTAAT
GAGAAGAGTCAGGAACAAGTGCAAGGCACAGTGTCTCTTGGATCTGTTCAAGAAGAAAAA
CCCGATGGATATAGTGAAGATAGCCACTTTTCGGCATCTGGTAGAACTTTGAACGCAGGC
TATGGTGACTCTGAAGTATGCCCATATGACCTTAGCTACGAGCCACCTTCAATGCCTCCA
CGAGTTTTTTGTTCTGAACGTTTGCCCAGGGAACAGGCTGGCCTAAATCGCTTGTCCAAA
TCTGATGATTCCTCTGCTGCACAGTTCATAATGACCCACGCACACTCTGAAGGCAGCCAG
CAGATCCTGGAATCAGTTGATAAATTACATGATGTTGGGAGATTTATACAGTCCGATAAG
AATCTGTCTGCTAATCAACCTGTTACCGAAGAGAAAAAGGTTGAACATCAGCAGTCTATA
GAGTTAGGTGACAATGCCAAGGGAGTTCATTCAAAAGTCGGTCAAGATGTTTCTGAAGCA
AATCTTGAGAAGCCCGAACTGAAAGCAGCAACTTATGCCGATAAAGTGAAATCTGGACCT
AGTAATCCTATCACTAGCAATAATGTTCATGACGTATCTGCTTCCAAGCCAACAGAGCTT
CATTGGGGTGATGCAGCTGCAAATAGACCAGAGGAAAATAAAGCTATGGGGCAAACACAG
CCTCTAGCTGAGAGAGAGCCTCAAATTGCAGCAGCAGCCACAGGGAAGCCATCTGCTACC
AGTGGCTCTCCTGAGCATGGTGACATTCTTATTGACATTAATGACCACTATCCCCGAGAG
TTCCTCTCTGATATTTTTTCCAAAGCTAAAATAATGGGTGATTCATCAGTGCCAGCTCTA
CTGCGTGCTGATGGAACTGGTTTGAGTTTAAATATGGAGAACCATGAACCAAAGCGCTGG
TCTTATTTTCAAAAGTTTGTCCGAGATGATTATGTCAGAAAAGACGTGTCTCTGATAGAC
CAGGATCATCTGAGTCTCTCTTCTTCTCGTGCAAATGTTGATGATGGAGCATCCATGGAT
TATGGTTATCCTCCTTTTAAGGGCGGTGGAGCTATGATAGACCATATGGACTCCCGAATG
AATATTGAAGGTGATATTCAACATCCATCGCGCGATGATGTTGGACCATCCACCATGAAT
GTGCCTTCAGACTACAATCCTACTCAAACCACAGGCATCCAAAGCATGCAGTATGACGGT
GCAATGCATTCAAAAATACCCGAATCCGATTATCAGGATGAGAACCAAGAAGTTCAGGAT
ACTGGTTTTCCACTCATCGATCTCTCTATGGGAGGTTTTGATCCAAACTCATTGCAGATT
ATCAAGAATGAAGATCTTGAGGAGTTGAGGGAATTAGGTTCTGGAACATTTGGAACTGTT
TACCATGGAAAATGGAGAGGAACTGATGTTGCCATAAAGAGAATCAAGAAAAGTTGTTTC
ACAGGCCGCTCATCAGAGCAGGAGAGACTGACTCTAGAGTTTTGGCGTGAAGCTGAAATT
CTTTCAAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTAGTGCAAGATGGGCCA
GGGGGAACTCTTGCAACATTAACAGAATTCATGGTGAATGGGTCTCTCAGACATGTTTTG
CTTTGCAAGGATAGACACCTAGATCGCCGCAAGAAGCTCATAATTGCAATGGATGCTGCA
TTTGGAATGGAATATCTGCATTCAAAGAATATTGTACATTTTGATTTGAAATGTGACAAT
TTGCTTGTCAACTTAAAAGATCCTTCTCGACCCATCTGTAAGGTTGGTGATTTTGGACTT
TCAAAAATAAAGAGAAATACGTTGGTCACTGGTGGTGTTAGGGGAACCCTTCCATGGATG
GCTCCCGAGTTATTGAATGGTAGCAGTAATAAGGTTTCTGAGAAGGTTGATGTTTTTTCC
TTTGGGATTGTGCTCTGGGAAATTCTGACTGGCGAGGAACCCTATGCTAATATGCATTAT
GGAGCAATTATAGGTGGTATAGTCAACAACACCTTGAGACCACCTGTTCCGAGCTTCTGC
GATCCTGAGTGGAGAATTCTTATGGAACAGTGCTGGGCTCCAGACCCTTCTGTTCGGCCA
TGCTTCACCGAAATTGCCAGACGTTTGCGTGCTATGTCTGCGGCATGCCCAACAAGACCA
CAAGCTCATCCACCTCAAAACCAACAGCCTAAGTAA