Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027036
CDS Infomation

pacid=37428337 polypeptide=PGSC0003DMP400018439 locus=PGSC0003DMG400010430 ID=PGSC0003DMT400027036.v4.03 annot-version=v4.03
Sequence

ATGGAGAGCGAGTTTTCCCATGAAATTGAACCAGTTTTTCAGGATTTTGAAGATGATGAA
CAATTTGGGTCTGGAGACGGAAGTGATGTTGAAAATCAACCTGTCAACACTGTAATATTT
GTTAATGACAGGAAACTGGATGGTAAAACTGCATTGCGAATTCTTCAACGTGCTGCTTTA
TATGATAACTGGAAGATTGCAGAACCAATTCTAAATAAGGAACCAAGATTTATTAATTTT
GAATTTGGAGAAACCTCTGAAACATTACTTCACGCTGCAGCATTAGCAAAAAGTAGCGGA
TTTGTGCGAGAGCTAATTAAACTAATGAAAGTAGGTGACTTGGAGAAAGGTGTGAATACG
GCATTTATGTTGGCAGCATTGGCAGGGCACATTGAAATTGCTAAAGCAATGAGAAAAAAG
AATAAGAATCTACCAAACATCTGTGGTAAGGAGGGAGATTTACCAATCTCTGTGGCAGCT
CAAGTTGGGCATAAAGCTATGGTATCATACCTTTATGAGGTCACAGATTTTGATGTGATA
CAGCAACAAGAACTCTTATACCTTCTTGAGATCACTATCCAGAATGAAATGTACGAGGTA
GCATTAAATATATTCAACAAGGACAGACAATTATTTGCCACTAAAATGTTACAAGGAAAT
ATTAATGTCTTGCACACGTTATCTCAAAAGTCCATAGCGATCAGTAACGCTTCTTCTCCG
GTGTGGAGAAAGTTTATTAGCGTGGGCAGGAGGCAATCCATTTCATTGCTAAAATTGCTT
CCGGAAAGATATGTAGTTGAGAAACAAGCTGAGACACTACTTGAGGAGCTATGGGCAGAG
TGTCTAAGAAGAGGAAGGGATAAGCTGTTAGACTTAGTGCTAAAAGAAAACTGGGTCCAT
TCTGCTGCAAAAGCAGGAAATCTAGGGTTTTTACTTGTGGTTACTCGTGATTTTCCTGTG
CTCATGTGGACGAACGACGATAAAAGGCATACCATTCTTCACGTTGCAGTTTTATATCGA
GAGGAAAAAGTCTTCAGTCTTATACACCAAATAGGAGGAATGAAAAACATATTTCTTGTA
GATTTTGACAATGATGGCAATAACATTCTACATTTGGCTGGGAAGTTAGGGGAGCCAATA
TTCAGTAAACAGAAAAGTAGTGGACAGATGGAAGCCCTGAAAAACAAACTTGTTCAGTCT
GTGCCTCCTAATGCTGATAATAATAATAATGCTGTATTCGTTGAATCACTACAACAGCTG
TTTCAAGAGATAGAAATCATTAGACACATAACAGAGACACAGTCTGTTAAGGCGGAAGAG
AAGATTATGCCGCCATCATTTCTTAGGGTTTCTGGAGCAGCACTTCAGATGCAAAGAGAG
ATATTGTGGTTCAAGGAAGTGGAGAAACTTATACCACCTTCAGGCCGCAAGAGGAGAAAC
AAGGATGGGAAAACCCCTAGAGAATTATTCACGGAAGAACACAAGATATTACTAAAAGAT
GGGGAAAAGTGGATGAAAGACACCGCAAATTCTTGTATGATTGCGGCAACTTTGATTGCC
ACGATGGTGTTTGCTGCTGGATTCACTGTGCCAGGTGGTAATATGGATGATAATGGTTTT
CCAATATGGCTAGAATTGAATGGATTTAGGATCTTTGTTATATCAGATGCAGTGGCACTA
TTCAGCTCAATCGTTTCTATCATTATGTTCTTGTCCATTCTGACATCTCGCTATGCTGAA
GATGACTTTCTTGTGTCATTGCCTGCTAAGTTATTCTTCGGACTTACAGCGTTGTTTGTT
TCGATTGTTAGCATGCTTGTGGCGTTTACAGCAACCTTCGTTTTGATCTATAGAAAACAT
ACGGGTTGGGAGCCAAAGCTCATTGTTGCTTGTGCTGGTGTTCCTGTGGCTTTATTTGGG
TGTTTACAGTACAAACTATGGTTCGATGTGGCAAAATCAACATATTGGTCCAAGTTTCTT
TTAAGATCGGGAAAGCTCAAAAGACAGAACCACCTTCATAATTATAATGTTTGTGCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400018439
PEP Infomation

pacid=37428337 transcript=PGSC0003DMT400027036 locus=PGSC0003DMG400010430 ID=PGSC0003DMT400027036.v4.03 annot-version=v4.03
Sequence

MESEFSHEIEPVFQDFEDDEQFGSGDGSDVENQPVNTVIFVNDRKLDGKTALRILQRAAL
YDNWKIAEPILNKEPRFINFEFGETSETLLHAAALAKSSGFVRELIKLMKVGDLEKGVNT
AFMLAALAGHIEIAKAMRKKNKNLPNICGKEGDLPISVAAQVGHKAMVSYLYEVTDFDVI
QQQELLYLLEITIQNEMYEVALNIFNKDRQLFATKMLQGNINVLHTLSQKSIAISNASSP
VWRKFISVGRRQSISLLKLLPERYVVEKQAETLLEELWAECLRRGRDKLLDLVLKENWVH
SAAKAGNLGFLLVVTRDFPVLMWTNDDKRHTILHVAVLYREEKVFSLIHQIGGMKNIFLV
DFDNDGNNILHLAGKLGEPIFSKQKSSGQMEALKNKLVQSVPPNADNNNNAVFVESLQQL
FQEIEIIRHITETQSVKAEEKIMPPSFLRVSGAALQMQREILWFKEVEKLIPPSGRKRRN
KDGKTPRELFTEEHKILLKDGEKWMKDTANSCMIAATLIATMVFAAGFTVPGGNMDDNGF
PIWLELNGFRIFVISDAVALFSSIVSIIMFLSILTSRYAEDDFLVSLPAKLFFGLTALFV
SIVSMLVAFTATFVLIYRKHTGWEPKLIVACAGVPVALFGCLQYKLWFDVAKSTYWSKFL
LRSGKLKRQNHLHNYNVCA*

Transcript Sequence

Transcript ID

PGSC0003DMT400027036
Transcript Infomation

pacid=37428337 locus=PGSC0003DMG400010430 ID=PGSC0003DMT400027036.v4.03 annot-version=v4.03
Sequence

ATGGAGAGCGAGTTTTCCCATGAAATTGAACCAGTTTTTCAGGATTTTGAAGATGATGAA
CAATTTGGGTCTGGAGACGGAAGTGATGTTGAAAATCAACCTGTCAACACTGTAATATTT
GTTAATGACAGGAAACTGGATGGTAAAACTGCATTGCGAATTCTTCAACGTGCTGCTTTA
TATGATAACTGGAAGATTGCAGAACCAATTCTAAATAAGGAACCAAGATTTATTAATTTT
GAATTTGGAGAAACCTCTGAAACATTACTTCACGCTGCAGCATTAGCAAAAAGTAGCGGA
TTTGTGCGAGAGCTAATTAAACTAATGAAAGTAGGTGACTTGGAGAAAGGTGTGAATACG
GCATTTATGTTGGCAGCATTGGCAGGGCACATTGAAATTGCTAAAGCAATGAGAAAAAAG
AATAAGAATCTACCAAACATCTGTGGTAAGGAGGGAGATTTACCAATCTCTGTGGCAGCT
CAAGTTGGGCATAAAGCTATGGTATCATACCTTTATGAGGTCACAGATTTTGATGTGATA
CAGCAACAAGAACTCTTATACCTTCTTGAGATCACTATCCAGAATGAAATGTACGAGGTA
GCATTAAATATATTCAACAAGGACAGACAATTATTTGCCACTAAAATGTTACAAGGAAAT
ATTAATGTCTTGCACACGTTATCTCAAAAGTCCATAGCGATCAGTAACGCTTCTTCTCCG
GTGTGGAGAAAGTTTATTAGCGTGGGCAGGAGGCAATCCATTTCATTGCTAAAATTGCTT
CCGGAAAGATATGTAGTTGAGAAACAAGCTGAGACACTACTTGAGGAGCTATGGGCAGAG
TGTCTAAGAAGAGGAAGGGATAAGCTGTTAGACTTAGTGCTAAAAGAAAACTGGGTCCAT
TCTGCTGCAAAAGCAGGAAATCTAGGGTTTTTACTTGTGGTTACTCGTGATTTTCCTGTG
CTCATGTGGACGAACGACGATAAAAGGCATACCATTCTTCACGTTGCAGTTTTATATCGA
GAGGAAAAAGTCTTCAGTCTTATACACCAAATAGGAGGAATGAAAAACATATTTCTTGTA
GATTTTGACAATGATGGCAATAACATTCTACATTTGGCTGGGAAGTTAGGGGAGCCAATA
TTCAGTAAACAGAAAAGTAGTGGACAGATGGAAGCCCTGAAAAACAAACTTGTTCAGTCT
GTGCCTCCTAATGCTGATAATAATAATAATGCTGTATTCGTTGAATCACTACAACAGCTG
TTTCAAGAGATAGAAATCATTAGACACATAACAGAGACACAGTCTGTTAAGGCGGAAGAG
AAGATTATGCCGCCATCATTTCTTAGGGTTTCTGGAGCAGCACTTCAGATGCAAAGAGAG
ATATTGTGGTTCAAGGAAGTGGAGAAACTTATACCACCTTCAGGCCGCAAGAGGAGAAAC
AAGGATGGGAAAACCCCTAGAGAATTATTCACGGAAGAACACAAGATATTACTAAAAGAT
GGGGAAAAGTGGATGAAAGACACCGCAAATTCTTGTATGATTGCGGCAACTTTGATTGCC
ACGATGGTGTTTGCTGCTGGATTCACTGTGCCAGGTGGTAATATGGATGATAATGGTTTT
CCAATATGGCTAGAATTGAATGGATTTAGGATCTTTGTTATATCAGATGCAGTGGCACTA
TTCAGCTCAATCGTTTCTATCATTATGTTCTTGTCCATTCTGACATCTCGCTATGCTGAA
GATGACTTTCTTGTGTCATTGCCTGCTAAGTTATTCTTCGGACTTACAGCGTTGTTTGTT
TCGATTGTTAGCATGCTTGTGGCGTTTACAGCAACCTTCGTTTTGATCTATAGAAAACAT
ACGGGTTGGGAGCCAAAGCTCATTGTTGCTTGTGCTGGTGTTCCTGTGGCTTTATTTGGG
TGTTTACAGTACAAACTATGGTTCGATGTGGCAAAATCAACATATTGGTCCAAGTTTCTT
TTAAGATCGGGAAAGCTCAAAAGACAGAACCACCTTCATAATTATAATGTTTGTGCATGA