Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026963
CDS Infomation

pacid=37428107 polypeptide=PGSC0003DMP400018384 locus=PGSC0003DMG400010399 ID=PGSC0003DMT400026963.v4.03 annot-version=v4.03
Sequence

ATGGAGTCTGACTTGTTGTCGGCGAAGGATGGGAGAGGGAGGCTGGTGAGGTTGATGGGT
TGCGTGAAGAATTACGATTGGGGACCACCCGGGAAGGAATCTCGTGTAGCACGGCTGTAT
GCTTGCAATAGTGGTAACTATGTTGACCAAGAGAAGCCTTATGCCGAATTTTGGATGGGG
ACTCACGATTCTGGGCCTTCCTACGTTGTGGAAGGAACTGAGAATGGATTGGTTAATGGT
AAGGGAGAGACACACAAGTTAACATTGAAGAATTGGATTCAAAACAACCCTAGTGTTCTT
GGAGAGAAGGTTGTGAACAAATGGGGTACTAACCTTCCTTTTCTCTTCAAGGTACTATCT
GTTGCAAAAGCTTTGTCCATACAGGCCCATCCAGACAAGGATTTAGCCTCTCGTCTGCAT
AGTGAGCTTCCGGATGTTTATAAGGATGACAATCACAAACCGGAGATGGCATTGGCTTTG
ACGGAATTTGAGGCATTATGTGGATTTATAAGTCTCAAGGAGCTTAAGTTGATTGTTCAA
ACTGTGCCCGAGATTGTCGAATTGGTCGGTACTGCACGCACAGAGCAGGTATTGGAATTG
AATGAGGATGATGGGAAGGAAAAAGGTAAATTAGTGCTACAATCAGTATTTACTGAGCTG
ATGTCAGCCAACAAGGATGTGGTTGCTGAAGTGATAGCTAAGCTTATTAGTCGCCTACAC
GTTAAAAATCAGGCAAGGGAGCTGACAGAGAAAGAACAAGTGGTGCTTAGACTTGAGAAA
CAGTATCCAGCTGATATTGGTGTCTTGGCTGCATTCTTGTTAAATTATGTGAAACTCAAT
CCTGGTGAAGCCTTATATTTAGGAGCAAATGAACCTCATGCTTATTTATATGGTGATTGT
ATTGAATGCATGGCAACATCAGACAACGTGGTACGTGCTGGCCTAACTCCAAAGCACAGA
GATGTTAAAACTCTATGCTCAATGCTCACTTACAGACAGGGTTTTCCTGAAATTCTGCTG
GGCACTGCAGTAAATCCTCATGTTATGAGGTACATTCCTCCTTTTGATGAATTTGAAGTT
GATCGCTGTATTCTTCCCGAACAATCAACTGCTGAATTTCCTGCTATTCCCGGTCCATCC
ATTTTTATGGTCGTGGAGGGAGAGGGAACATTAACCTCATCATTAAAGGAGATTATCCAT
GAAGGTGATGTCCTTTTTGCACCTGCAAACACCAACATTACTGTTTCGACATCTTCTGGT
TTGCAATTATATAGAACAGGAATAAACAGCAGGTTTTTCGAGGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400018384
PEP Infomation

pacid=37428107 transcript=PGSC0003DMT400026963 locus=PGSC0003DMG400010399 ID=PGSC0003DMT400026963.v4.03 annot-version=v4.03
Sequence

MESDLLSAKDGRGRLVRLMGCVKNYDWGPPGKESRVARLYACNSGNYVDQEKPYAEFWMG
THDSGPSYVVEGTENGLVNGKGETHKLTLKNWIQNNPSVLGEKVVNKWGTNLPFLFKVLS
VAKALSIQAHPDKDLASRLHSELPDVYKDDNHKPEMALALTEFEALCGFISLKELKLIVQ
TVPEIVELVGTARTEQVLELNEDDGKEKGKLVLQSVFTELMSANKDVVAEVIAKLISRLH
VKNQARELTEKEQVVLRLEKQYPADIGVLAAFLLNYVKLNPGEALYLGANEPHAYLYGDC
IECMATSDNVVRAGLTPKHRDVKTLCSMLTYRQGFPEILLGTAVNPHVMRYIPPFDEFEV
DRCILPEQSTAEFPAIPGPSIFMVVEGEGTLTSSLKEIIHEGDVLFAPANTNITVSTSSG
LQLYRTGINSRFFEE*

Transcript Sequence

Transcript ID

PGSC0003DMT400026963
Transcript Infomation

pacid=37428107 locus=PGSC0003DMG400010399 ID=PGSC0003DMT400026963.v4.03 annot-version=v4.03
Sequence

ATGGAGTCTGACTTGTTGTCGGCGAAGGATGGGAGAGGGAGGCTGGTGAGGTTGATGGGT
TGCGTGAAGAATTACGATTGGGGACCACCCGGGAAGGAATCTCGTGTAGCACGGCTGTAT
GCTTGCAATAGTGGTAACTATGTTGACCAAGAGAAGCCTTATGCCGAATTTTGGATGGGG
ACTCACGATTCTGGGCCTTCCTACGTTGTGGAAGGAACTGAGAATGGATTGGTTAATGGT
AAGGGAGAGACACACAAGTTAACATTGAAGAATTGGATTCAAAACAACCCTAGTGTTCTT
GGAGAGAAGGTTGTGAACAAATGGGGTACTAACCTTCCTTTTCTCTTCAAGGTACTATCT
GTTGCAAAAGCTTTGTCCATACAGGCCCATCCAGACAAGGATTTAGCCTCTCGTCTGCAT
AGTGAGCTTCCGGATGTTTATAAGGATGACAATCACAAACCGGAGATGGCATTGGCTTTG
ACGGAATTTGAGGCATTATGTGGATTTATAAGTCTCAAGGAGCTTAAGTTGATTGTTCAA
ACTGTGCCCGAGATTGTCGAATTGGTCGGTACTGCACGCACAGAGCAGGTATTGGAATTG
AATGAGGATGATGGGAAGGAAAAAGGTAAATTAGTGCTACAATCAGTATTTACTGAGCTG
ATGTCAGCCAACAAGGATGTGGTTGCTGAAGTGATAGCTAAGCTTATTAGTCGCCTACAC
GTTAAAAATCAGGCAAGGGAGCTGACAGAGAAAGAACAAGTGGTGCTTAGACTTGAGAAA
CAGTATCCAGCTGATATTGGTGTCTTGGCTGCATTCTTGTTAAATTATGTGAAACTCAAT
CCTGGTGAAGCCTTATATTTAGGAGCAAATGAACCTCATGCTTATTTATATGGTGATTGT
ATTGAATGCATGGCAACATCAGACAACGTGGTACGTGCTGGCCTAACTCCAAAGCACAGA
GATGTTAAAACTCTATGCTCAATGCTCACTTACAGACAGGGTTTTCCTGAAATTCTGCTG
GGCACTGCAGTAAATCCTCATGTTATGAGGTACATTCCTCCTTTTGATGAATTTGAAGTT
GATCGCTGTATTCTTCCCGAACAATCAACTGCTGAATTTCCTGCTATTCCCGGTCCATCC
ATTTTTATGGTCGTGGAGGGAGAGGGAACATTAACCTCATCATTAAAGGAGATTATCCAT
GAAGGTGATGTCCTTTTTGCACCTGCAAACACCAACATTACTGTTTCGACATCTTCTGGT
TTGCAATTATATAGAACAGGAATAAACAGCAGGTTTTTCGAGGAGTGA