Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026700
CDS Infomation

pacid=37457430 polypeptide=PGSC0003DMP400018225 locus=PGSC0003DMG400010317 ID=PGSC0003DMT400026700.v4.03 annot-version=v4.03
Sequence

ATGGAGTTGACATCTGTAAGGTGCCTTATGAACAGTATCTCTCGATTCATTCACCTTGTA
ACATGTCTAACATCAAAGAGTATGCCTGGTCAAAAGAACTACAAAAATATTGCAACTTTG
TTGAAGCTATTAAAACCAGTACTTGATGATGTTGCTCAACAAAAAGCTCCTTCAGACGAA
ACCATATGCAGGCAGTGTGAAGAACTAGATGTAGCCATTAATGAAGCTAGGGAATTACTG
GAAGAATGGTCTCCTAAGAAGAGCAAGATTCTCTGGGTTTTGCAGAGTGAACCAGAGTTG
CTGAAAATCCAGAGCATTGCACTCAAGTTATCTCACATTTTATGTCAATTACTAGAATCA
TCACCGCCTTCTCTGGGTCCTTCGGAAATTCAGCCCTTCATACAGGAGATTCAAAAGTTT
GAAGTGGGGCAAATATCGAAACAGATGAATATGGCTCCCGAAGTAGGAAAGATTCTTGTC
TCAGAAAGTCTGACAGAAATGATTCACTCTCTTAATTTTGTATCTCATGAAGAATTATTG
AATGAATGTATTGCATTAGAGAAGGAGCGGATGAAGGCTAAAGATAATGAAACGAGAGGA
GATTTAGATAAGATCAGCCTTTCCATAGATCTCTTCTCTGATATTCGTGATTGTATGCTT
GAACTTGACCACTTCAAGGCCATAGATGGTATTAAGATCCCTCCTTATTTCCGGTGTCCC
TTGTCTTTGGAACTGATGGTGAATCCAGTCATTATTGCTTCAGGCCAAACTTATGAGAAG
GCTTCCATTCAAAAATGGCTGGATCATGGACTAACTACATGCCCAAGAACCAACCAAGCA
CTTGCACATTCAAATCTTATCCCAAATTACACTGTTAAAGCTCTGATAGAAAATTGGTGT
GAGGTAAACAAAGTGAGGCTTGACGGGAACCCTGAGTCCACTCAGGATGGAATCACATCT
AATTCTGTACACCTTACTAATATGGACAATGTGCGAGGTTCCTCAGATCCCAGCAATTCA
ACATCAAGACTTTGTCATCAAGGTGGACAAGCTTTTGAAAGTCAGAAGGTTGATTGCACA
TCCGAATTAAGTGAAGAAGAATTTAGTTCATGCCGTATCAGGGAGGCTGAAAAATCTGGC
CACACATCCCCAGGGATTTCCTATATACACAGCAGGAGTGAATCCGTATCAAGTGCTGTT
TCCAGTATTGAATATCTTCCCTCAGCGTCAACTGATGTCTCAAGGATATCAAGCAAACAT
GATAATGTGAGTGATACATCTGGAGAGGTACAATGTGATTACCGCATTTCTTCTCCGTGC
AACAAGAGTGTTGGGAATTCTCCTAATTTGTCTGCAAGGCAATATCGCAGCTCCAAAACA
ATGAGTGAAATGGCTGTGAACGTACTTCACAACCATGCTAGACAACTTTCCTTACCAACA
AAGTCGGCATCTGATGATCTGACCACGAGTTCCCATGTTGAAAAGCTTATTAGAGACTTG
GAAAGTCAATCAACTGAGGTGCAAATGGCAGCTGCAGCAGAATTCCGATTTCTTGCAAAG
CACAACATGGAAAACCGAGCTATTATAGGCCGCTGTGGGGCTATTGCTCCACTTATCTCC
TTGCTAAACTCTGATGTGAAACCAACTCAAGAGCATGCTGTGACAGCATTACTAAACTTA
TCAATAAATGAAGACATCAAGGCCATGATTGCGGAGCAAGGGGCGCTTGAACCCCTCATC
TATGTCCTGAGAACAGGAAATGCTGGAGCAAAAGAGAATGCTGCTGCAGCCCTTTTCAGT
CTGTCTCTTTTGGAAGAGTACAGAAAAAAGATTGGGCGTTCTGGAGCAGTGAAAGCATTG
GTCGATCTTCTTGGTTTAGGTACCATCAGAGGGAAAAAAGACGCTGCTACAGCATTATTT
AACCTGTCAATATTTCATGAAAATAAGGCTCGCATCATTCAGGTTGGAGCCGTGAAGCAT
CTCATTAGGTTGTTGGACCCTTCAAATGAATTGGTTGATAAGGCTGTTGCTCTTCTTGCA
AATTTGTCTACCATTTCAGAGGGCTGCTTAGCTATTGCCCGAGAGGAGGGTATACCATCA
CTAGTCGAGATTGTTGAAACCGGATCTCAGCGGGGAAAGGAAAATGCTGCCTCAATACTG
CTGCAACTGTGTCTCAACAGTCCCAAGTATTGTCGATTAGTGTTGCAAGAAGGTGCTGTC
CCACCACTTGTTGCATTGTCTCAGTCGGGCTCCCCAAGAGCAAAGGAGAAGGCACAACAA
CTTCTCAGTCATTTCCGGAGCCAACGTGAAGCAGCCACGGGGAGGGGAAAGTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400018225
PEP Infomation

pacid=37457430 transcript=PGSC0003DMT400026700 locus=PGSC0003DMG400010317 ID=PGSC0003DMT400026700.v4.03 annot-version=v4.03
Sequence

MELTSVRCLMNSISRFIHLVTCLTSKSMPGQKNYKNIATLLKLLKPVLDDVAQQKAPSDE
TICRQCEELDVAINEARELLEEWSPKKSKILWVLQSEPELLKIQSIALKLSHILCQLLES
SPPSLGPSEIQPFIQEIQKFEVGQISKQMNMAPEVGKILVSESLTEMIHSLNFVSHEELL
NECIALEKERMKAKDNETRGDLDKISLSIDLFSDIRDCMLELDHFKAIDGIKIPPYFRCP
LSLELMVNPVIIASGQTYEKASIQKWLDHGLTTCPRTNQALAHSNLIPNYTVKALIENWC
EVNKVRLDGNPESTQDGITSNSVHLTNMDNVRGSSDPSNSTSRLCHQGGQAFESQKVDCT
SELSEEEFSSCRIREAEKSGHTSPGISYIHSRSESVSSAVSSIEYLPSASTDVSRISSKH
DNVSDTSGEVQCDYRISSPCNKSVGNSPNLSARQYRSSKTMSEMAVNVLHNHARQLSLPT
KSASDDLTTSSHVEKLIRDLESQSTEVQMAAAAEFRFLAKHNMENRAIIGRCGAIAPLIS
LLNSDVKPTQEHAVTALLNLSINEDIKAMIAEQGALEPLIYVLRTGNAGAKENAAAALFS
LSLLEEYRKKIGRSGAVKALVDLLGLGTIRGKKDAATALFNLSIFHENKARIIQVGAVKH
LIRLLDPSNELVDKAVALLANLSTISEGCLAIAREEGIPSLVEIVETGSQRGKENAASIL
LQLCLNSPKYCRLVLQEGAVPPLVALSQSGSPRAKEKAQQLLSHFRSQREAATGRGKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400026700
Transcript Infomation

pacid=37457430 locus=PGSC0003DMG400010317 ID=PGSC0003DMT400026700.v4.03 annot-version=v4.03
Sequence

ATGGAGTTGACATCTGTAAGGTGCCTTATGAACAGTATCTCTCGATTCATTCACCTTGTA
ACATGTCTAACATCAAAGAGTATGCCTGGTCAAAAGAACTACAAAAATATTGCAACTTTG
TTGAAGCTATTAAAACCAGTACTTGATGATGTTGCTCAACAAAAAGCTCCTTCAGACGAA
ACCATATGCAGGCAGTGTGAAGAACTAGATGTAGCCATTAATGAAGCTAGGGAATTACTG
GAAGAATGGTCTCCTAAGAAGAGCAAGATTCTCTGGGTTTTGCAGAGTGAACCAGAGTTG
CTGAAAATCCAGAGCATTGCACTCAAGTTATCTCACATTTTATGTCAATTACTAGAATCA
TCACCGCCTTCTCTGGGTCCTTCGGAAATTCAGCCCTTCATACAGGAGATTCAAAAGTTT
GAAGTGGGGCAAATATCGAAACAGATGAATATGGCTCCCGAAGTAGGAAAGATTCTTGTC
TCAGAAAGTCTGACAGAAATGATTCACTCTCTTAATTTTGTATCTCATGAAGAATTATTG
AATGAATGTATTGCATTAGAGAAGGAGCGGATGAAGGCTAAAGATAATGAAACGAGAGGA
GATTTAGATAAGATCAGCCTTTCCATAGATCTCTTCTCTGATATTCGTGATTGTATGCTT
GAACTTGACCACTTCAAGGCCATAGATGGTATTAAGATCCCTCCTTATTTCCGGTGTCCC
TTGTCTTTGGAACTGATGGTGAATCCAGTCATTATTGCTTCAGGCCAAACTTATGAGAAG
GCTTCCATTCAAAAATGGCTGGATCATGGACTAACTACATGCCCAAGAACCAACCAAGCA
CTTGCACATTCAAATCTTATCCCAAATTACACTGTTAAAGCTCTGATAGAAAATTGGTGT
GAGGTAAACAAAGTGAGGCTTGACGGGAACCCTGAGTCCACTCAGGATGGAATCACATCT
AATTCTGTACACCTTACTAATATGGACAATGTGCGAGGTTCCTCAGATCCCAGCAATTCA
ACATCAAGACTTTGTCATCAAGGTGGACAAGCTTTTGAAAGTCAGAAGGTTGATTGCACA
TCCGAATTAAGTGAAGAAGAATTTAGTTCATGCCGTATCAGGGAGGCTGAAAAATCTGGC
CACACATCCCCAGGGATTTCCTATATACACAGCAGGAGTGAATCCGTATCAAGTGCTGTT
TCCAGTATTGAATATCTTCCCTCAGCGTCAACTGATGTCTCAAGGATATCAAGCAAACAT
GATAATGTGAGTGATACATCTGGAGAGGTACAATGTGATTACCGCATTTCTTCTCCGTGC
AACAAGAGTGTTGGGAATTCTCCTAATTTGTCTGCAAGGCAATATCGCAGCTCCAAAACA
ATGAGTGAAATGGCTGTGAACGTACTTCACAACCATGCTAGACAACTTTCCTTACCAACA
AAGTCGGCATCTGATGATCTGACCACGAGTTCCCATGTTGAAAAGCTTATTAGAGACTTG
GAAAGTCAATCAACTGAGGTGCAAATGGCAGCTGCAGCAGAATTCCGATTTCTTGCAAAG
CACAACATGGAAAACCGAGCTATTATAGGCCGCTGTGGGGCTATTGCTCCACTTATCTCC
TTGCTAAACTCTGATGTGAAACCAACTCAAGAGCATGCTGTGACAGCATTACTAAACTTA
TCAATAAATGAAGACATCAAGGCCATGATTGCGGAGCAAGGGGCGCTTGAACCCCTCATC
TATGTCCTGAGAACAGGAAATGCTGGAGCAAAAGAGAATGCTGCTGCAGCCCTTTTCAGT
CTGTCTCTTTTGGAAGAGTACAGAAAAAAGATTGGGCGTTCTGGAGCAGTGAAAGCATTG
GTCGATCTTCTTGGTTTAGGTACCATCAGAGGGAAAAAAGACGCTGCTACAGCATTATTT
AACCTGTCAATATTTCATGAAAATAAGGCTCGCATCATTCAGGTTGGAGCCGTGAAGCAT
CTCATTAGGTTGTTGGACCCTTCAAATGAATTGGTTGATAAGGCTGTTGCTCTTCTTGCA
AATTTGTCTACCATTTCAGAGGGCTGCTTAGCTATTGCCCGAGAGGAGGGTATACCATCA
CTAGTCGAGATTGTTGAAACCGGATCTCAGCGGGGAAAGGAAAATGCTGCCTCAATACTG
CTGCAACTGTGTCTCAACAGTCCCAAGTATTGTCGATTAGTGTTGCAAGAAGGTGCTGTC
CCACCACTTGTTGCATTGTCTCAGTCGGGCTCCCCAAGAGCAAAGGAGAAGGCACAACAA
CTTCTCAGTCATTTCCGGAGCCAACGTGAAGCAGCCACGGGGAGGGGAAAGTCATGA