Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026679
CDS Infomation

pacid=37456827 polypeptide=PGSC0003DMP400018209 locus=PGSC0003DMG400010310 ID=PGSC0003DMT400026679.v4.03 annot-version=v4.03
Sequence

ATGGAGCTAACTATTCTTCTTTGTGCTCTATTTCTAGTTTTGCCTTTACTTGTTACTAAA
TGGTACAAAGAGTGTAATAGTAAGAAAAAATTACCTCCAGGCCCTTGGAAACTCCCATTC
ATTGGAAACTTACACCATCTTGTTGATTGGCAATCATCTGAGTTACTACCTCATCGCACT
CTTGCTAAATTAGCCTCAAAATATGGAGATTTAATGCACATGAAACTCGGCGAACGCGAA
GCCATTGTTGTGTCCTCGCCTCAAATGGTTAGAGAAGTGATGAGAAAACATGATCTCAAC
TTCTCTAATCGACCAACGCTTTTGGTTGGAACAGAGATGTTTTATGACCATGCGGATATG
GGATTTTGTAACTACGGTGATTTTTGGAGACAAATGCGTAAAATTTGTATTCAGGAATTA
CTTAGTCATAAAAATATTCAGTCATTTTATCCCAATATGCTCAATGAGATAACTAATCTT
GTTACCTCAATTAAAAGTTCTGCTTCTGAGGGTGGAAGTTCAATCAACATGACGGACACG
TTGTCTTTGTACACGAATTCGATTATTTGCAAAGCAAGTGTAGGCAGGGCTTGTAAAAGT
CAGGGGTCTTTGATTGAGATCATGAGAACAGTGGCTGCTTCAGCTGGAGTGTTTGATCTC
GCGGATCTTTTTCCATCGATGAAGATGATTCATTTCATTAGTGGATTAAAATACAAATTG
CGGAAAATGCATGATGAGGTTGATGTTCTTTTAGAAGAAATTATCAATGAACATGAATTC
CAAAATAGTGAGACCTCAGAAGAAGATATAGTTGATGTTCTATTAAGGCTTCAAAAGAGC
CAAGATTTTTCAATTCCTATCACAAGAGATAATATCAAGGCTATAATCATTGACTTGTTT
TCAGGAGGATCTACAACTTCAGCATCAACAATGGAATGGGCTTTCTCAGAACTAATGAAA
AAACCGGAAATAATGAAGAAAGCACAGGATGAAGTTAGGGAAGTATTCAAAGGAAAGGAA
ACTACAATCGATCAAGCCGATATTCAGAAACTCAAATACATAAAAATGGTTGTTAAGGAG
ACAGTAAGGTTTCATCCTTTAGCTCCATTATTAGCTCCAAGAGAATCCAGGGAAGAGTGT
GAGATTAATGGCTATGTTATACCTAAAGGCACAATGGCTCTTGTCAATTTCTGGGCAATT
TCAAGGGATCCAAAGTATTGGCAAAATCCTGAAGTATTTGATCCAGAGAGATTTAATGAT
AGTCACCTTGATTTTATTGGAGCACATTTCGAGTTTACGCCTTTTGGCACAGGAAGGAGA
ATTTGTCCAGGGTTATCATTTTCAATGGCTACTGTTGAGCTTAGTATAGCACTATTACTA
TACCATTTTGATTGGAAACTTCCAAATGGAATGAACCCTCATGAACTAGACATGACTGAG
AAATTTAGCAATGCTCTTGAAAGGAAAAACAACTTGTTCTTGATTCCTTCTCCCTATGTT
CGCGCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400018209
PEP Infomation

pacid=37456827 transcript=PGSC0003DMT400026679 locus=PGSC0003DMG400010310 ID=PGSC0003DMT400026679.v4.03 annot-version=v4.03
Sequence

MELTILLCALFLVLPLLVTKWYKECNSKKKLPPGPWKLPFIGNLHHLVDWQSSELLPHRT
LAKLASKYGDLMHMKLGEREAIVVSSPQMVREVMRKHDLNFSNRPTLLVGTEMFYDHADM
GFCNYGDFWRQMRKICIQELLSHKNIQSFYPNMLNEITNLVTSIKSSASEGGSSINMTDT
LSLYTNSIICKASVGRACKSQGSLIEIMRTVAASAGVFDLADLFPSMKMIHFISGLKYKL
RKMHDEVDVLLEEIINEHEFQNSETSEEDIVDVLLRLQKSQDFSIPITRDNIKAIIIDLF
SGGSTTSASTMEWAFSELMKKPEIMKKAQDEVREVFKGKETTIDQADIQKLKYIKMVVKE
TVRFHPLAPLLAPRESREECEINGYVIPKGTMALVNFWAISRDPKYWQNPEVFDPERFND
SHLDFIGAHFEFTPFGTGRRICPGLSFSMATVELSIALLLYHFDWKLPNGMNPHELDMTE
KFSNALERKNNLFLIPSPYVRA*

Transcript Sequence

Transcript ID

PGSC0003DMT400026679
Transcript Infomation

pacid=37456827 locus=PGSC0003DMG400010310 ID=PGSC0003DMT400026679.v4.03 annot-version=v4.03
Sequence

ATGGAGCTAACTATTCTTCTTTGTGCTCTATTTCTAGTTTTGCCTTTACTTGTTACTAAA
TGGTACAAAGAGTGTAATAGTAAGAAAAAATTACCTCCAGGCCCTTGGAAACTCCCATTC
ATTGGAAACTTACACCATCTTGTTGATTGGCAATCATCTGAGTTACTACCTCATCGCACT
CTTGCTAAATTAGCCTCAAAATATGGAGATTTAATGCACATGAAACTCGGCGAACGCGAA
GCCATTGTTGTGTCCTCGCCTCAAATGGTTAGAGAAGTGATGAGAAAACATGATCTCAAC
TTCTCTAATCGACCAACGCTTTTGGTTGGAACAGAGATGTTTTATGACCATGCGGATATG
GGATTTTGTAACTACGGTGATTTTTGGAGACAAATGCGTAAAATTTGTATTCAGGAATTA
CTTAGTCATAAAAATATTCAGTCATTTTATCCCAATATGCTCAATGAGATAACTAATCTT
GTTACCTCAATTAAAAGTTCTGCTTCTGAGGGTGGAAGTTCAATCAACATGACGGACACG
TTGTCTTTGTACACGAATTCGATTATTTGCAAAGCAAGTGTAGGCAGGGCTTGTAAAAGT
CAGGGGTCTTTGATTGAGATCATGAGAACAGTGGCTGCTTCAGCTGGAGTGTTTGATCTC
GCGGATCTTTTTCCATCGATGAAGATGATTCATTTCATTAGTGGATTAAAATACAAATTG
CGGAAAATGCATGATGAGGTTGATGTTCTTTTAGAAGAAATTATCAATGAACATGAATTC
CAAAATAGTGAGACCTCAGAAGAAGATATAGTTGATGTTCTATTAAGGCTTCAAAAGAGC
CAAGATTTTTCAATTCCTATCACAAGAGATAATATCAAGGCTATAATCATTGACTTGTTT
TCAGGAGGATCTACAACTTCAGCATCAACAATGGAATGGGCTTTCTCAGAACTAATGAAA
AAACCGGAAATAATGAAGAAAGCACAGGATGAAGTTAGGGAAGTATTCAAAGGAAAGGAA
ACTACAATCGATCAAGCCGATATTCAGAAACTCAAATACATAAAAATGGTTGTTAAGGAG
ACAGTAAGGTTTCATCCTTTAGCTCCATTATTAGCTCCAAGAGAATCCAGGGAAGAGTGT
GAGATTAATGGCTATGTTATACCTAAAGGCACAATGGCTCTTGTCAATTTCTGGGCAATT
TCAAGGGATCCAAAGTATTGGCAAAATCCTGAAGTATTTGATCCAGAGAGATTTAATGAT
AGTCACCTTGATTTTATTGGAGCACATTTCGAGTTTACGCCTTTTGGCACAGGAAGGAGA
ATTTGTCCAGGGTTATCATTTTCAATGGCTACTGTTGAGCTTAGTATAGCACTATTACTA
TACCATTTTGATTGGAAACTTCCAAATGGAATGAACCCTCATGAACTAGACATGACTGAG
AAATTTAGCAATGCTCTTGAAAGGAAAAACAACTTGTTCTTGATTCCTTCTCCCTATGTT
CGCGCCTAA