Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026577
CDS Infomation

pacid=37477376 polypeptide=PGSC0003DMP400018139 locus=PGSC0003DMG400010264 ID=PGSC0003DMT400026577.v4.03 annot-version=v4.03
Sequence

ATGGCATTGAAGAGGGGATTATCTGGTAGGAACAGTGGAAATGTATCTTGTTACCCAATT
GTGGTTCTTGTCTTCTGTTCATTCCTTGCTCCATTGATTTTCTTCGTGGGCCGTGGCATG
TACACCTCTACTTCAATTGATAATAATGATTTTTCAACTACTACAAGCAAACAGGTATCC
AGCTTTGTTAAAGAAAAAATATTGGCCAAGAGCAATACTAATAATGCAGAGGGAAACAAG
TGGACTCAGATAGCTGCAAATGTCAGAACTGAGATCTCCAGAGGCAAACAAGATGATCTT
GTAGATGATGATCATTCCCAGTTTCATACACCTGCTATTTTGGCCAGAAGGCAATTGAGA
GAGAGGAGACGTGAAAAGCGTGCTGCTGCTTTAGTGAAACAGGATGATGAAGTAACTGTG
AAGCTTGAAAATGCTGCCCTTGAACGCTCTAAGTCAGTTGACTCTGCTGTGCTGGGGAAG
TATAGCATATGGAGGAAAGAGAATGAAAATGAGAATACTGATTCAAAGGTACACTTGATG
CGAGACCAAATGATTATGGCAAGGGTCTATATAAGCATTGCAACAATGAAGAAGAAGCCC
GGCTTGGCTCAAGAGTTACAGAAGCAGCTTAAAGAAAGTCAACGTGCGTTAGGTGAAGCA
ATGTATGATGCTGATCTAACTCGCAGTGCACATGAGAAGATTAAATCAATGGACCAAGTG
CTTTCCAAAGCTAAAGATCAACTCTATGACTGCAATCTTGTCACGGGGAAGCTGAGAGCA
ATACTGCAGTCTGCGGATGAGCAAGTTAGAAGTTTAAAAAGGCAGAGCACATTTTTGAGC
CAATTAGCTGCAAAGACCATTCCAAATGGTATCCACTGCTTATCCATGCGTCTGGCTATT
GATTATTACCTCCTCCCTCCTGAAAAAAGAAAGTTCCCTAGAAGTGAGAATCTGGAAAAT
CCCAGTCTTTTCCATTATGCCCTGTTCTCTGACAATGTTTTGGCTGCTTCAGTTGTTGTC
AACTCAACTATCATGAATGCTAAGGAACCAGCAAAACATGTATTTCATCTTGTCACTGAT
AAGTTGAACTTTGGAGCTATGAATATGTGGTTCTTGTTGAACCCTCCTGGAAAAGCTACA
ATCCATGTTGAAAATGTTGACGAGTTCAAGTGGCTTAATTCGTCATACTGTCCTGTCCTT
CGGCAGTTAGAGTCTGCTGCTATGAAGGAATATTATTTCAAGGGTTCACATTCCACCACA
CTATCAGCTGGTTCTTCTAATTTGAAGTATCGGAACCCCAAATATCTTTCAATGCTCAAT
CACCTTAGATTTTATCTCCCTCAGATTTATCCCAAATTGGATAAAATCCTTTTTCTTGAT
GACGATATTGTTGTTCAGAAAGACTTGACAGGACTGTGGTCGGTGAATCTTCATGAAAAA
GTGAATGGTGCTGTTGAAACATGTGGTGAGAGTTTTCACCGTTTTGACAAGTATCTAAAT
TTCTCAAATCCTCATATTGCCAAAAACTTTGACCCAAATGCTTGTGGGTGGGCATATGGG
ATGAACATATTTGATCTTAAGGAGTGGAAGAAGAGAGACATAACTGGTATATATCACAAG
TGGCAAAACATGAATGAAGACAGGGTCCTTTGGAAATTAGGGACACTACCTCCAGGGCTA
ATGACATTTTACGGGCTTACACATCCACTGGATAAGTCGTGGCATGTTCTAGGTTTGGGT
TACAGCCCAAGCATTGATGGGTCAGAAATTGAGAATGCTGCCGTGATACACTACAATGGG
AACATGAAACCATGGCTAGAGTTGGCAATGACAAAGTACAAGTCATACTGGACCAAATAC
ATTAAGTTTGATCATCCATACATTCGCACCTGCAAACTTGGTGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400018139
PEP Infomation

pacid=37477376 transcript=PGSC0003DMT400026577 locus=PGSC0003DMG400010264 ID=PGSC0003DMT400026577.v4.03 annot-version=v4.03
Sequence

MALKRGLSGRNSGNVSCYPIVVLVFCSFLAPLIFFVGRGMYTSTSIDNNDFSTTTSKQVS
SFVKEKILAKSNTNNAEGNKWTQIAANVRTEISRGKQDDLVDDDHSQFHTPAILARRQLR
ERRREKRAAALVKQDDEVTVKLENAALERSKSVDSAVLGKYSIWRKENENENTDSKVHLM
RDQMIMARVYISIATMKKKPGLAQELQKQLKESQRALGEAMYDADLTRSAHEKIKSMDQV
LSKAKDQLYDCNLVTGKLRAILQSADEQVRSLKRQSTFLSQLAAKTIPNGIHCLSMRLAI
DYYLLPPEKRKFPRSENLENPSLFHYALFSDNVLAASVVVNSTIMNAKEPAKHVFHLVTD
KLNFGAMNMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESAAMKEYYFKGSHSTT
LSAGSSNLKYRNPKYLSMLNHLRFYLPQIYPKLDKILFLDDDIVVQKDLTGLWSVNLHEK
VNGAVETCGESFHRFDKYLNFSNPHIAKNFDPNACGWAYGMNIFDLKEWKKRDITGIYHK
WQNMNEDRVLWKLGTLPPGLMTFYGLTHPLDKSWHVLGLGYSPSIDGSEIENAAVIHYNG
NMKPWLELAMTKYKSYWTKYIKFDHPYIRTCKLGE*

Transcript Sequence

Transcript ID

PGSC0003DMT400026577
Transcript Infomation

pacid=37477376 locus=PGSC0003DMG400010264 ID=PGSC0003DMT400026577.v4.03 annot-version=v4.03
Sequence

ATGGCATTGAAGAGGGGATTATCTGGTAGGAACAGTGGAAATGTATCTTGTTACCCAATT
GTGGTTCTTGTCTTCTGTTCATTCCTTGCTCCATTGATTTTCTTCGTGGGCCGTGGCATG
TACACCTCTACTTCAATTGATAATAATGATTTTTCAACTACTACAAGCAAACAGGTATCC
AGCTTTGTTAAAGAAAAAATATTGGCCAAGAGCAATACTAATAATGCAGAGGGAAACAAG
TGGACTCAGATAGCTGCAAATGTCAGAACTGAGATCTCCAGAGGCAAACAAGATGATCTT
GTAGATGATGATCATTCCCAGTTTCATACACCTGCTATTTTGGCCAGAAGGCAATTGAGA
GAGAGGAGACGTGAAAAGCGTGCTGCTGCTTTAGTGAAACAGGATGATGAAGTAACTGTG
AAGCTTGAAAATGCTGCCCTTGAACGCTCTAAGTCAGTTGACTCTGCTGTGCTGGGGAAG
TATAGCATATGGAGGAAAGAGAATGAAAATGAGAATACTGATTCAAAGGTACACTTGATG
CGAGACCAAATGATTATGGCAAGGGTCTATATAAGCATTGCAACAATGAAGAAGAAGCCC
GGCTTGGCTCAAGAGTTACAGAAGCAGCTTAAAGAAAGTCAACGTGCGTTAGGTGAAGCA
ATGTATGATGCTGATCTAACTCGCAGTGCACATGAGAAGATTAAATCAATGGACCAAGTG
CTTTCCAAAGCTAAAGATCAACTCTATGACTGCAATCTTGTCACGGGGAAGCTGAGAGCA
ATACTGCAGTCTGCGGATGAGCAAGTTAGAAGTTTAAAAAGGCAGAGCACATTTTTGAGC
CAATTAGCTGCAAAGACCATTCCAAATGGTATCCACTGCTTATCCATGCGTCTGGCTATT
GATTATTACCTCCTCCCTCCTGAAAAAAGAAAGTTCCCTAGAAGTGAGAATCTGGAAAAT
CCCAGTCTTTTCCATTATGCCCTGTTCTCTGACAATGTTTTGGCTGCTTCAGTTGTTGTC
AACTCAACTATCATGAATGCTAAGGAACCAGCAAAACATGTATTTCATCTTGTCACTGAT
AAGTTGAACTTTGGAGCTATGAATATGTGGTTCTTGTTGAACCCTCCTGGAAAAGCTACA
ATCCATGTTGAAAATGTTGACGAGTTCAAGTGGCTTAATTCGTCATACTGTCCTGTCCTT
CGGCAGTTAGAGTCTGCTGCTATGAAGGAATATTATTTCAAGGGTTCACATTCCACCACA
CTATCAGCTGGTTCTTCTAATTTGAAGTATCGGAACCCCAAATATCTTTCAATGCTCAAT
CACCTTAGATTTTATCTCCCTCAGATTTATCCCAAATTGGATAAAATCCTTTTTCTTGAT
GACGATATTGTTGTTCAGAAAGACTTGACAGGACTGTGGTCGGTGAATCTTCATGAAAAA
GTGAATGGTGCTGTTGAAACATGTGGTGAGAGTTTTCACCGTTTTGACAAGTATCTAAAT
TTCTCAAATCCTCATATTGCCAAAAACTTTGACCCAAATGCTTGTGGGTGGGCATATGGG
ATGAACATATTTGATCTTAAGGAGTGGAAGAAGAGAGACATAACTGGTATATATCACAAG
TGGCAAAACATGAATGAAGACAGGGTCCTTTGGAAATTAGGGACACTACCTCCAGGGCTA
ATGACATTTTACGGGCTTACACATCCACTGGATAAGTCGTGGCATGTTCTAGGTTTGGGT
TACAGCCCAAGCATTGATGGGTCAGAAATTGAGAATGCTGCCGTGATACACTACAATGGG
AACATGAAACCATGGCTAGAGTTGGCAATGACAAAGTACAAGTCATACTGGACCAAATAC
ATTAAGTTTGATCATCCATACATTCGCACCTGCAAACTTGGTGAATGA