Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026549
CDS Infomation

pacid=37427219 polypeptide=PGSC0003DMP400018122 locus=PGSC0003DMG400010249 ID=PGSC0003DMT400026549.v4.03 annot-version=v4.03
Sequence

ATGACTTCTTCTTCTCTAAAATTGGTTAAATGGAGTTTCTTGTTTTTGGTCTTAAACCAT
AATTTTCAAAATATTGAGGGGTGTTTCGACTCCATTATTAGTTTCGGCGATTCGCTTGCT
GACACTGGAAATAAACTTCATATCACTCTAAACAAAATCCCTCCTTCCCATTTCTCCTTG
CCACCTTATGGTGAAACCTTCTTTCATCATCCTACCGGTCGCTTTTCTGATGGACGTCTT
GTTATAGATTTTATTGCTGAGAGTTTTGGGCTCCCATTAGTGCCAGCATATTTGGAAGGA
AAAGATGAAAGGAATTATATTGTAAAATTCAGGCAAGGTGTGAATTTTGCAGTGGGAGGG
GCAACAGCACTTGATTCTGCCTACTTGTTGGACAAGGGAGTAACGTCCAGTAACAATGTG
TCTTTGGGGACTCAACTGGATTGGTTCAAAGATATGATGTCTTCTTTTTGCAAATTTCCA
TCAGAATGCAAGGAATTTCTTCAAAACTCATTGATACTTATGGGAGAAATTGGAGGCAAT
GATTTCAACTATGGTTTTCTTGGAAATAGCACCAAGGAAGAGGTTGAATCATATGTTCCA
GCAGTCATCAAGACTCTTAGTTCAGCTATACAGGAATTAATCGAGTTAGGCGCAAGCACA
CTGTTAGTTCCAGGGGATTTGCCGATTGGATGTTCAACAGCTTATCTCACAAAATATATG
CACTCAGATAAGGGACAGTATGATCCCAAAACTGGTTGTTTAAATTGGCTTAACAACTTC
TCACAGCAATACAATGAGCTTCTTCAGAAGGAACTTCATCTTCTAAGAGACCTTTATCCT
GCTGCTACAATAATCTATGCTGACTACTACAATGCAGCCATGCAATTTTATGCCTCTCCA
AAGAGCCATGGTTTTAGAAAAGGAGCTTTAGTTGCATGTTGTGGGGCGGGAGGGCCATAC
AACTTTATGTTTTCTACAATATGTGGGGATCCAGCTGCCAGAAATATTTGCAGTGACACT
TCAGTGTATGCTAGTTGGGATGGAATGCATTTTACAGAAGCTGCATATAAATGGATTGCC
ACTGGACTTTTAAAAGGCACTTTCACTTTTCCTCCCCTCCCTAAAATATGCACTGATCGC
TTCAATCCAAATGTAAACCAATTTTATGATTCTGAGTTGTTTGGTGTGAGATATAAGGTA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400018122
PEP Infomation

pacid=37427219 transcript=PGSC0003DMT400026549 locus=PGSC0003DMG400010249 ID=PGSC0003DMT400026549.v4.03 annot-version=v4.03
Sequence

MTSSSLKLVKWSFLFLVLNHNFQNIEGCFDSIISFGDSLADTGNKLHITLNKIPPSHFSL
PPYGETFFHHPTGRFSDGRLVIDFIAESFGLPLVPAYLEGKDERNYIVKFRQGVNFAVGG
ATALDSAYLLDKGVTSSNNVSLGTQLDWFKDMMSSFCKFPSECKEFLQNSLILMGEIGGN
DFNYGFLGNSTKEEVESYVPAVIKTLSSAIQELIELGASTLLVPGDLPIGCSTAYLTKYM
HSDKGQYDPKTGCLNWLNNFSQQYNELLQKELHLLRDLYPAATIIYADYYNAAMQFYASP
KSHGFRKGALVACCGAGGPYNFMFSTICGDPAARNICSDTSVYASWDGMHFTEAAYKWIA
TGLLKGTFTFPPLPKICTDRFNPNVNQFYDSELFGVRYKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400026549
Transcript Infomation

pacid=37427219 locus=PGSC0003DMG400010249 ID=PGSC0003DMT400026549.v4.03 annot-version=v4.03
Sequence

ATGACTTCTTCTTCTCTAAAATTGGTTAAATGGAGTTTCTTGTTTTTGGTCTTAAACCAT
AATTTTCAAAATATTGAGGGGTGTTTCGACTCCATTATTAGTTTCGGCGATTCGCTTGCT
GACACTGGAAATAAACTTCATATCACTCTAAACAAAATCCCTCCTTCCCATTTCTCCTTG
CCACCTTATGGTGAAACCTTCTTTCATCATCCTACCGGTCGCTTTTCTGATGGACGTCTT
GTTATAGATTTTATTGCTGAGAGTTTTGGGCTCCCATTAGTGCCAGCATATTTGGAAGGA
AAAGATGAAAGGAATTATATTGTAAAATTCAGGCAAGGTGTGAATTTTGCAGTGGGAGGG
GCAACAGCACTTGATTCTGCCTACTTGTTGGACAAGGGAGTAACGTCCAGTAACAATGTG
TCTTTGGGGACTCAACTGGATTGGTTCAAAGATATGATGTCTTCTTTTTGCAAATTTCCA
TCAGAATGCAAGGAATTTCTTCAAAACTCATTGATACTTATGGGAGAAATTGGAGGCAAT
GATTTCAACTATGGTTTTCTTGGAAATAGCACCAAGGAAGAGGTTGAATCATATGTTCCA
GCAGTCATCAAGACTCTTAGTTCAGCTATACAGGAATTAATCGAGTTAGGCGCAAGCACA
CTGTTAGTTCCAGGGGATTTGCCGATTGGATGTTCAACAGCTTATCTCACAAAATATATG
CACTCAGATAAGGGACAGTATGATCCCAAAACTGGTTGTTTAAATTGGCTTAACAACTTC
TCACAGCAATACAATGAGCTTCTTCAGAAGGAACTTCATCTTCTAAGAGACCTTTATCCT
GCTGCTACAATAATCTATGCTGACTACTACAATGCAGCCATGCAATTTTATGCCTCTCCA
AAGAGCCATGGTTTTAGAAAAGGAGCTTTAGTTGCATGTTGTGGGGCGGGAGGGCCATAC
AACTTTATGTTTTCTACAATATGTGGGGATCCAGCTGCCAGAAATATTTGCAGTGACACT
TCAGTGTATGCTAGTTGGGATGGAATGCATTTTACAGAAGCTGCATATAAATGGATTGCC
ACTGGACTTTTAAAAGGCACTTTCACTTTTCCTCCCCTCCCTAAAATATGCACTGATCGC
TTCAATCCAAATGTAAACCAATTTTATGATTCTGAGTTGTTTGGTGTGAGATATAAGGTA
TAA