Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026536
CDS Infomation

pacid=37427294 polypeptide=PGSC0003DMP400018112 locus=PGSC0003DMG400010246 ID=PGSC0003DMT400026536.v4.03 annot-version=v4.03
Sequence

ATGGTTGCTGGTAAAGTAAAAATGGCTATGGGTTTACAGAAATCACCTGCTAATCCAAAG
CCATCGAAGCAAGATTCATCTCCTAAGCCTCCTTCTCCTTCACCAAGCTGCCCGAAACAG
CAAACTTCCAAAGGTGCTGTGTTTTCTCGTTCTTTCGGGGTTTATTTTCCTCGTTCCTCT
GCTCAAGTTCAGCCTCGTCCACCGGATGTTACGGAGCTCCTACGTATAGTTGAAGAGTTG
CGTGAAAGAGAGTCACGTTTGAAAACAGAGCTGCTTGAGAAGAAACTGCTGAAAGAGTCA
GTTGCTATACTTCCGTTGTTGGAGAGTGAGATCACTCAAAAAGATGCGGAAATCGGACGA
AAAGGTCGGATGATTGAATGCTTGGAAGTGGAAAACGAGAGGCTTAGAGAAGAAGTAGAG
ATGTTACACATTGAGCTATCGAAGCAAAATGGGAGGTATGATGAGAGGTTAAAAGCTATG
GAAGCTGAAATTTCTGAGCTGAAGAAAGCTAATGAAGAGTTATCTGCTCATAGATTTGTA
GATGTGACAAGTAGTGCTCATAACAAAGCTAATCTCACCAAGTATTTGAGGAAATGCGTG
ACTCAACCTAGCATTACTGTAACTTCAAAACCAGAGTGTGAGGTGAAAGAGGAAATTGTT
AGTGCATTGGAAATGTGTGAAAGGCCTAGGCATTCTCGGTCTAATTCAGATGAGCTAGCT
GAAATATCCGTTGGGATTATGAGTTTAAGATCACGAGTTCCCCGAGTACCTAAACCACCA
CCGCGGCCATCGTCTGCACTATTGCCATCATCCTCATCATCCTCGTCTTTATCATCTTCT
TCATCTTCTCCTTCGCATAGTTCCTTATCAGATTCAGCTGAACGTGCATTAGCTGAAATT
TCTAACATTCCACTTCCACCTCCCCCACCTCCGCTACCAGCACCAGCGCCGCCCAAAATG
GCAGCAGTTCCTCCTCCACCGCCGCCGCCACCACCACCAGTACCTTCAGCTGCGTCCAAA
ACAGGCCCACCGCCACCTCCTCCGCCACCTCCAAAAGGTTTAAAGCCTTTGCCAGCAAAA
GTCAGGCGGATACCTGAAGTAGTGGAGTTTTATCACTCTCTTATGCGGAGAGACTGCCGG
AGGGATTCCGGTGCCGGAGTTGCCTCGGCTGCCGATGCTCCATCGTCGGCGAAGGATATG
ATCGGAGAAATTGAGAACCGGTCTGTGCATTTACTAGCTATTAAAACAGATGTTGAGACA
CAAGGAGATTTTATTAGGTTTTTGATCAAAGAAGTAGAACATGCTGCATTCACAGACATT
GTGGATGTTGTGCCTTTTGTTAAATGGCTCGATGACGAGCTCTCCTACTTGGTTGATGAA
AGGGCTGTTCTGAAACACTTTGAATGGCCTGAACAAAAGGCTGATGCATTGAGAGAAGCT
GCATTTGGATATTGTGATCTAAAGAAACTTGAATCTGAGGCATCATCCTTTCGTGATAAT
CCTAGACAACCATGTGGCACAGCTCTTAAGAAAATGCAGGCCTTATTTGAGAAATTAGAG
CATGGAATTTACAATCTGTCAAGAATGAGAGAATCAGCTACAAAAAGATATAAGGTCTTT
CAAATCCCAATTGAGTGGATGCTGGATACTGGTTTTGTTACTCAGATCAAGCTGGCATCA
GTAAAATTAGCCATGAAGTACATGAAGAGGGTATCTGCAGAGTTAGAAATGGTTGGTGGT
GGTCCTGAAGAAGAAGAACTTATAATTCAAGGCGTTAGGTTCGCCTTTCGAGTACATCAG
TTTGCGGGTGGTTTCGACGTGGAGACAATGAGGGGATTCCAAGAGCTGAGAGACAAAGCA
AGATCATGCCATATACAATGTCAAAATCAGCAACACAAATATGTTTGCAAATCTACACCT
TGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400018112
PEP Infomation

pacid=37427294 transcript=PGSC0003DMT400026536 locus=PGSC0003DMG400010246 ID=PGSC0003DMT400026536.v4.03 annot-version=v4.03
Sequence

MVAGKVKMAMGLQKSPANPKPSKQDSSPKPPSPSPSCPKQQTSKGAVFSRSFGVYFPRSS
AQVQPRPPDVTELLRIVEELRERESRLKTELLEKKLLKESVAILPLLESEITQKDAEIGR
KGRMIECLEVENERLREEVEMLHIELSKQNGRYDERLKAMEAEISELKKANEELSAHRFV
DVTSSAHNKANLTKYLRKCVTQPSITVTSKPECEVKEEIVSALEMCERPRHSRSNSDELA
EISVGIMSLRSRVPRVPKPPPRPSSALLPSSSSSSSLSSSSSSPSHSSLSDSAERALAEI
SNIPLPPPPPPLPAPAPPKMAAVPPPPPPPPPPVPSAASKTGPPPPPPPPPKGLKPLPAK
VRRIPEVVEFYHSLMRRDCRRDSGAGVASAADAPSSAKDMIGEIENRSVHLLAIKTDVET
QGDFIRFLIKEVEHAAFTDIVDVVPFVKWLDDELSYLVDERAVLKHFEWPEQKADALREA
AFGYCDLKKLESEASSFRDNPRQPCGTALKKMQALFEKLEHGIYNLSRMRESATKRYKVF
QIPIEWMLDTGFVTQIKLASVKLAMKYMKRVSAELEMVGGGPEEEELIIQGVRFAFRVHQ
FAGGFDVETMRGFQELRDKARSCHIQCQNQQHKYVCKSTPC*

Transcript Sequence

Transcript ID

PGSC0003DMT400026536
Transcript Infomation

pacid=37427294 locus=PGSC0003DMG400010246 ID=PGSC0003DMT400026536.v4.03 annot-version=v4.03
Sequence

ATGGTTGCTGGTAAAGTAAAAATGGCTATGGGTTTACAGAAATCACCTGCTAATCCAAAG
CCATCGAAGCAAGATTCATCTCCTAAGCCTCCTTCTCCTTCACCAAGCTGCCCGAAACAG
CAAACTTCCAAAGGTGCTGTGTTTTCTCGTTCTTTCGGGGTTTATTTTCCTCGTTCCTCT
GCTCAAGTTCAGCCTCGTCCACCGGATGTTACGGAGCTCCTACGTATAGTTGAAGAGTTG
CGTGAAAGAGAGTCACGTTTGAAAACAGAGCTGCTTGAGAAGAAACTGCTGAAAGAGTCA
GTTGCTATACTTCCGTTGTTGGAGAGTGAGATCACTCAAAAAGATGCGGAAATCGGACGA
AAAGGTCGGATGATTGAATGCTTGGAAGTGGAAAACGAGAGGCTTAGAGAAGAAGTAGAG
ATGTTACACATTGAGCTATCGAAGCAAAATGGGAGGTATGATGAGAGGTTAAAAGCTATG
GAAGCTGAAATTTCTGAGCTGAAGAAAGCTAATGAAGAGTTATCTGCTCATAGATTTGTA
GATGTGACAAGTAGTGCTCATAACAAAGCTAATCTCACCAAGTATTTGAGGAAATGCGTG
ACTCAACCTAGCATTACTGTAACTTCAAAACCAGAGTGTGAGGTGAAAGAGGAAATTGTT
AGTGCATTGGAAATGTGTGAAAGGCCTAGGCATTCTCGGTCTAATTCAGATGAGCTAGCT
GAAATATCCGTTGGGATTATGAGTTTAAGATCACGAGTTCCCCGAGTACCTAAACCACCA
CCGCGGCCATCGTCTGCACTATTGCCATCATCCTCATCATCCTCGTCTTTATCATCTTCT
TCATCTTCTCCTTCGCATAGTTCCTTATCAGATTCAGCTGAACGTGCATTAGCTGAAATT
TCTAACATTCCACTTCCACCTCCCCCACCTCCGCTACCAGCACCAGCGCCGCCCAAAATG
GCAGCAGTTCCTCCTCCACCGCCGCCGCCACCACCACCAGTACCTTCAGCTGCGTCCAAA
ACAGGCCCACCGCCACCTCCTCCGCCACCTCCAAAAGGTTTAAAGCCTTTGCCAGCAAAA
GTCAGGCGGATACCTGAAGTAGTGGAGTTTTATCACTCTCTTATGCGGAGAGACTGCCGG
AGGGATTCCGGTGCCGGAGTTGCCTCGGCTGCCGATGCTCCATCGTCGGCGAAGGATATG
ATCGGAGAAATTGAGAACCGGTCTGTGCATTTACTAGCTATTAAAACAGATGTTGAGACA
CAAGGAGATTTTATTAGGTTTTTGATCAAAGAAGTAGAACATGCTGCATTCACAGACATT
GTGGATGTTGTGCCTTTTGTTAAATGGCTCGATGACGAGCTCTCCTACTTGGTTGATGAA
AGGGCTGTTCTGAAACACTTTGAATGGCCTGAACAAAAGGCTGATGCATTGAGAGAAGCT
GCATTTGGATATTGTGATCTAAAGAAACTTGAATCTGAGGCATCATCCTTTCGTGATAAT
CCTAGACAACCATGTGGCACAGCTCTTAAGAAAATGCAGGCCTTATTTGAGAAATTAGAG
CATGGAATTTACAATCTGTCAAGAATGAGAGAATCAGCTACAAAAAGATATAAGGTCTTT
CAAATCCCAATTGAGTGGATGCTGGATACTGGTTTTGTTACTCAGATCAAGCTGGCATCA
GTAAAATTAGCCATGAAGTACATGAAGAGGGTATCTGCAGAGTTAGAAATGGTTGGTGGT
GGTCCTGAAGAAGAAGAACTTATAATTCAAGGCGTTAGGTTCGCCTTTCGAGTACATCAG
TTTGCGGGTGGTTTCGACGTGGAGACAATGAGGGGATTCCAAGAGCTGAGAGACAAAGCA
AGATCATGCCATATACAATGTCAAAATCAGCAACACAAATATGTTTGCAAATCTACACCT
TGCTAA