Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026504
CDS Infomation

pacid=37428447 polypeptide=PGSC0003DMP400018084 locus=PGSC0003DMG400010231 ID=PGSC0003DMT400026504.v4.03 annot-version=v4.03
Sequence

ATGGCGAAAAAGCAGCTGGATTTCAATGCACCTCTTTTATCTGTGAGGAAAATAGCATCA
TCTTTAACTCCCAATGAGAGAGCAAATAAAAAGATGGCAGATAAGGTACCACCAAATCGA
CAACAATCACTACCTGTCAAAAAATCAGATTGGGAATTGACTGAGGTGACAAAACCAGTA
GCTGTTCCATTTGTGTGGGAACAGATCCCTGGAAGACCAAAAGATGACATTGAAGTCCGA
ACTAGCCTTCGTGTGGAGCGTTCAAGTAGTCCTAGGTTGCCTCCAGGAAGATTGCCAGAG
ACTGTTCGGTTCTATTCGGGTGAAAGGCCTCGTACTCATAACATTTACAGGTCTCCAGCT
GAAGGACTTCCTTGGATGGATCATGCAGCTTTACTGGATAGCCTGGTGGAAAGTATATAC
ACGAGAGGAGATAGAGAAAGTGAGGATGGTGCTTATTCTGATGGTCCTGAAACAATGTCA
CCTACCGAATCCTTATCCTTGAACTGCAGTGTCAGTGGTCTGAGCGGACATCAAACTTCA
GATTTGCAACCATCCGGAACCTTTTCCATTGACTCCCAAACTAGAGACTTTATGATGAGT
CGATTCTTGCCAGCAGCAAAAGCTGTTGTGTTGGAGACTCCTCAATACGTTCATAAAAAA
CCAGTCTCTGCTGAACAACCGATGCCAGTCAAAAAGCTGGTCCCCGTGGAACGAAAACCT
TTGGTTAAGCCATTGGAGTCTAACCCTGTCTCATATTATAGCAGCCATCCAGCTGATGTA
GGAAGTGAAACTGAAGATGATGTGCCTGAGAATCCGGACAAAAAGCCAAGTAAAGGGTGG
AGATTTTTCCCTCGGATTTGTGTGAAGAATTCTTTGTGCCTATTAAATCCACTGCCAGGA
TTGAAAGTGAAGACACGTGCTCCGACACCCTCGCCTCAAGCAGTGAAGAGAGTTTCAGGA
ACGAAACCAAAGATGGCCCAGAGTCCCACATCTTATGCTCATGAAGTCAAGAAATTAACT
AGAAAAGCTTATAGTGGTCCTCTTGAGAAGAATGCTTGTGATACCATTAATAAGCAAAGA
TTTCATTCTGGAGTACTGTCCCGCGAGCTGTACAAAGCTGATAATAGAAGTATGTCCGGG
CAGCTGTCTAATCCAAACGACTCATGTAAGCTAGTTGGAATCTCTCCTGGTAGGCGTTCA
AGAAGTGGGGCTATATCTCCTTATCGAAATGTAGCACCCCCATCTCCATTCAATGAGGGT
ACAAGGTTTCTTGGTGTCCCAAAGGAAATGGAGAGTCTTTGGGCTAGTCGCTTTGATTCA
TTCCGCAAAGGTTGCTACACTGTCAAGGACAAAGCAGTACCACAGAGAATGGGCACAGGA
AAGTTTTTTGATTCGCCAAGTGAAGTAGTTGAGAAAACCTTGTACATAGATTCTGTAGAT
AATGTGCAAATTTCAGCCCCTAACGCTGCTTCTTTGAAACCCAAGGGAATAGTGAACTCC
CCGGATAAGATTATGAAAACTCTGGTTGAAAACAGAAAAGTGGTTGAAAACTTGGCTGCC
ATGTCTCCTATTCAAGGTGCCAGGCGCTCAGATGTTTTAGAGAAAAATAGCAAACAGATT
GTTGAAAAGGAGTCTTCCCTTGATTTGATTGAAGCTTCTACAATTTCCATATCAACACAC
AAAGGTCCTGCTGATCAAGAGTTTTTGAAACTAGAGCAAAATGTTGATACAGTATCTGGA
GCCTTAGAGTCTTCAAAAGTTCATCCTTGTGGGAATTTAGTTACAGAAAATGAAGATAAC
CAAAATGCAAAAGACTCAAAAGATTCTAACCTTACCTCCTTGGAATCTACTTTACCACCA
CCATTACCTAAATCTCCCTCTGAGTCTTGGCTTTGGCGCACGCTGCCTTCCATTCCTTTG
AGAACTCCATTCTTGAGTTTTAACTCTAAGAAGCAGAATCAGAAGTCCCAAACTGATGGT
ACCAAGTGGGAGACAATCGTGAAAACTTCTAATTTGCATAAGGATCATGTCCGTTACTCT
GAGGAACTATATACTCTTGGTTCTTGTCAGCAGAGCAAATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400018084
PEP Infomation

pacid=37428447 transcript=PGSC0003DMT400026504 locus=PGSC0003DMG400010231 ID=PGSC0003DMT400026504.v4.03 annot-version=v4.03
Sequence

MAKKQLDFNAPLLSVRKIASSLTPNERANKKMADKVPPNRQQSLPVKKSDWELTEVTKPV
AVPFVWEQIPGRPKDDIEVRTSLRVERSSSPRLPPGRLPETVRFYSGERPRTHNIYRSPA
EGLPWMDHAALLDSLVESIYTRGDRESEDGAYSDGPETMSPTESLSLNCSVSGLSGHQTS
DLQPSGTFSIDSQTRDFMMSRFLPAAKAVVLETPQYVHKKPVSAEQPMPVKKLVPVERKP
LVKPLESNPVSYYSSHPADVGSETEDDVPENPDKKPSKGWRFFPRICVKNSLCLLNPLPG
LKVKTRAPTPSPQAVKRVSGTKPKMAQSPTSYAHEVKKLTRKAYSGPLEKNACDTINKQR
FHSGVLSRELYKADNRSMSGQLSNPNDSCKLVGISPGRRSRSGAISPYRNVAPPSPFNEG
TRFLGVPKEMESLWASRFDSFRKGCYTVKDKAVPQRMGTGKFFDSPSEVVEKTLYIDSVD
NVQISAPNAASLKPKGIVNSPDKIMKTLVENRKVVENLAAMSPIQGARRSDVLEKNSKQI
VEKESSLDLIEASTISISTHKGPADQEFLKLEQNVDTVSGALESSKVHPCGNLVTENEDN
QNAKDSKDSNLTSLESTLPPPLPKSPSESWLWRTLPSIPLRTPFLSFNSKKQNQKSQTDG
TKWETIVKTSNLHKDHVRYSEELYTLGSCQQSKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400026504
Transcript Infomation

pacid=37428447 locus=PGSC0003DMG400010231 ID=PGSC0003DMT400026504.v4.03 annot-version=v4.03
Sequence

ATGGCGAAAAAGCAGCTGGATTTCAATGCACCTCTTTTATCTGTGAGGAAAATAGCATCA
TCTTTAACTCCCAATGAGAGAGCAAATAAAAAGATGGCAGATAAGGTACCACCAAATCGA
CAACAATCACTACCTGTCAAAAAATCAGATTGGGAATTGACTGAGGTGACAAAACCAGTA
GCTGTTCCATTTGTGTGGGAACAGATCCCTGGAAGACCAAAAGATGACATTGAAGTCCGA
ACTAGCCTTCGTGTGGAGCGTTCAAGTAGTCCTAGGTTGCCTCCAGGAAGATTGCCAGAG
ACTGTTCGGTTCTATTCGGGTGAAAGGCCTCGTACTCATAACATTTACAGGTCTCCAGCT
GAAGGACTTCCTTGGATGGATCATGCAGCTTTACTGGATAGCCTGGTGGAAAGTATATAC
ACGAGAGGAGATAGAGAAAGTGAGGATGGTGCTTATTCTGATGGTCCTGAAACAATGTCA
CCTACCGAATCCTTATCCTTGAACTGCAGTGTCAGTGGTCTGAGCGGACATCAAACTTCA
GATTTGCAACCATCCGGAACCTTTTCCATTGACTCCCAAACTAGAGACTTTATGATGAGT
CGATTCTTGCCAGCAGCAAAAGCTGTTGTGTTGGAGACTCCTCAATACGTTCATAAAAAA
CCAGTCTCTGCTGAACAACCGATGCCAGTCAAAAAGCTGGTCCCCGTGGAACGAAAACCT
TTGGTTAAGCCATTGGAGTCTAACCCTGTCTCATATTATAGCAGCCATCCAGCTGATGTA
GGAAGTGAAACTGAAGATGATGTGCCTGAGAATCCGGACAAAAAGCCAAGTAAAGGGTGG
AGATTTTTCCCTCGGATTTGTGTGAAGAATTCTTTGTGCCTATTAAATCCACTGCCAGGA
TTGAAAGTGAAGACACGTGCTCCGACACCCTCGCCTCAAGCAGTGAAGAGAGTTTCAGGA
ACGAAACCAAAGATGGCCCAGAGTCCCACATCTTATGCTCATGAAGTCAAGAAATTAACT
AGAAAAGCTTATAGTGGTCCTCTTGAGAAGAATGCTTGTGATACCATTAATAAGCAAAGA
TTTCATTCTGGAGTACTGTCCCGCGAGCTGTACAAAGCTGATAATAGAAGTATGTCCGGG
CAGCTGTCTAATCCAAACGACTCATGTAAGCTAGTTGGAATCTCTCCTGGTAGGCGTTCA
AGAAGTGGGGCTATATCTCCTTATCGAAATGTAGCACCCCCATCTCCATTCAATGAGGGT
ACAAGGTTTCTTGGTGTCCCAAAGGAAATGGAGAGTCTTTGGGCTAGTCGCTTTGATTCA
TTCCGCAAAGGTTGCTACACTGTCAAGGACAAAGCAGTACCACAGAGAATGGGCACAGGA
AAGTTTTTTGATTCGCCAAGTGAAGTAGTTGAGAAAACCTTGTACATAGATTCTGTAGAT
AATGTGCAAATTTCAGCCCCTAACGCTGCTTCTTTGAAACCCAAGGGAATAGTGAACTCC
CCGGATAAGATTATGAAAACTCTGGTTGAAAACAGAAAAGTGGTTGAAAACTTGGCTGCC
ATGTCTCCTATTCAAGGTGCCAGGCGCTCAGATGTTTTAGAGAAAAATAGCAAACAGATT
GTTGAAAAGGAGTCTTCCCTTGATTTGATTGAAGCTTCTACAATTTCCATATCAACACAC
AAAGGTCCTGCTGATCAAGAGTTTTTGAAACTAGAGCAAAATGTTGATACAGTATCTGGA
GCCTTAGAGTCTTCAAAAGTTCATCCTTGTGGGAATTTAGTTACAGAAAATGAAGATAAC
CAAAATGCAAAAGACTCAAAAGATTCTAACCTTACCTCCTTGGAATCTACTTTACCACCA
CCATTACCTAAATCTCCCTCTGAGTCTTGGCTTTGGCGCACGCTGCCTTCCATTCCTTTG
AGAACTCCATTCTTGAGTTTTAACTCTAAGAAGCAGAATCAGAAGTCCCAAACTGATGGT
ACCAAGTGGGAGACAATCGTGAAAACTTCTAATTTGCATAAGGATCATGTCCGTTACTCT
GAGGAACTATATACTCTTGGTTCTTGTCAGCAGAGCAAATCTTGA