Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026489
CDS Infomation

pacid=37426647 polypeptide=PGSC0003DMP400018071 locus=PGSC0003DMG400010221 ID=PGSC0003DMT400026489.v4.03 annot-version=v4.03
Sequence

ATGGGTAGCACGGCCGAAAAATGGGAAGAACTTAGTGGGAAAAACAATTGGGATGGGTTA
TTAAACCCCTTGGATGTTGATCTTCGTAAATATATCATTCATTACGGAGAATTGGCTCAT
GCAACTTATGACACTTTGATTATGGAGAGAGCATCCAAATATGCAGGAGCTAGCAGATAT
TCGATGGAAAATTTCTTTACTAAAGTTGGACTTGACCCAAACAAATATCGCGTGACCAAG
TTTTTCTATGCTACCGCATCCATTCCACTTCCCGATGCTTTCATAGTGAAATCATTTTCA
AGAGAAGCATGGAGTAAGGAATCAAATTTTATGGGATACATTGCTGTGTCTACTGATGAG
GGTAAAGCTTCACTAGGAAGAAGGGACATTGTGATTAATTGGAGAGGAACTATACAGAAG
ATGGAGTGGGTTAATGACCTTCAATTTTTACTTATCCCAGCACCCAAAATATTTGGTGAT
GGAGGTTTGCTTCATTTGTTTAAACCTTTGGTGCATCATGGCTTCTATAATGTTTATACA
TCAGCAAGTTCACGATCACAGTTTAATCAAACTAGTGTCAGAGACCAGGTGATCAAAGAA
GTGAAAAGATTGGTTGAGGAATATAAGCATGAAGAAGTCAGCATAACAGTGACCGGACAT
AGCCTAGGTGCATCACTTGCAACTCTAAATGCAGTTGACATAACCTTCAATGGTATCAAC
AAAACAAGTGAAGGCAAGGAGTTTCCAGTGACTGCTTTTGCATTCGCAAGTCCTAAAGTT
GGAGATCTCCAATTTAAGGCAGCATTTGACAAACTGAAGCATCTTCATGTCTTGAGGATT
CACAATTTAATGGATATTGTTCCAAAATACCCACCCATTGGCTATTTTGACGTTGGGAAG
GAGCTAATGATTGATACCACAAAATCTCCCTATGTGAAACCTCCTGGAGAACCTCTCAGC
TGGCATTTGTTGGAGCCGTACTTGCATGGAGTCGCTGGAACTCAAGGTTTAGGAATTTTT
GCAGGTTTTAAACTAGAGGTGAATCGTGATATCTCACTTGTCAACAAGCAGTGGAACATT
TTGAAAGACGAATATTGTATTCCTGGGAGGTGGTGGGTTGAGAAGTGCAAAGGGATGGTT
CAACAAGAAGATGGATCTTGGCTTATGTTAGATCGCGATGAGTATGAGTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400018071
PEP Infomation

pacid=37426647 transcript=PGSC0003DMT400026489 locus=PGSC0003DMG400010221 ID=PGSC0003DMT400026489.v4.03 annot-version=v4.03
Sequence

MGSTAEKWEELSGKNNWDGLLNPLDVDLRKYIIHYGELAHATYDTLIMERASKYAGASRY
SMENFFTKVGLDPNKYRVTKFFYATASIPLPDAFIVKSFSREAWSKESNFMGYIAVSTDE
GKASLGRRDIVINWRGTIQKMEWVNDLQFLLIPAPKIFGDGGLLHLFKPLVHHGFYNVYT
SASSRSQFNQTSVRDQVIKEVKRLVEEYKHEEVSITVTGHSLGASLATLNAVDITFNGIN
KTSEGKEFPVTAFAFASPKVGDLQFKAAFDKLKHLHVLRIHNLMDIVPKYPPIGYFDVGK
ELMIDTTKSPYVKPPGEPLSWHLLEPYLHGVAGTQGLGIFAGFKLEVNRDISLVNKQWNI
LKDEYCIPGRWWVEKCKGMVQQEDGSWLMLDRDEYEF*

Transcript Sequence

Transcript ID

PGSC0003DMT400026489
Transcript Infomation

pacid=37426647 locus=PGSC0003DMG400010221 ID=PGSC0003DMT400026489.v4.03 annot-version=v4.03
Sequence

ATGGGTAGCACGGCCGAAAAATGGGAAGAACTTAGTGGGAAAAACAATTGGGATGGGTTA
TTAAACCCCTTGGATGTTGATCTTCGTAAATATATCATTCATTACGGAGAATTGGCTCAT
GCAACTTATGACACTTTGATTATGGAGAGAGCATCCAAATATGCAGGAGCTAGCAGATAT
TCGATGGAAAATTTCTTTACTAAAGTTGGACTTGACCCAAACAAATATCGCGTGACCAAG
TTTTTCTATGCTACCGCATCCATTCCACTTCCCGATGCTTTCATAGTGAAATCATTTTCA
AGAGAAGCATGGAGTAAGGAATCAAATTTTATGGGATACATTGCTGTGTCTACTGATGAG
GGTAAAGCTTCACTAGGAAGAAGGGACATTGTGATTAATTGGAGAGGAACTATACAGAAG
ATGGAGTGGGTTAATGACCTTCAATTTTTACTTATCCCAGCACCCAAAATATTTGGTGAT
GGAGGTTTGCTTCATTTGTTTAAACCTTTGGTGCATCATGGCTTCTATAATGTTTATACA
TCAGCAAGTTCACGATCACAGTTTAATCAAACTAGTGTCAGAGACCAGGTGATCAAAGAA
GTGAAAAGATTGGTTGAGGAATATAAGCATGAAGAAGTCAGCATAACAGTGACCGGACAT
AGCCTAGGTGCATCACTTGCAACTCTAAATGCAGTTGACATAACCTTCAATGGTATCAAC
AAAACAAGTGAAGGCAAGGAGTTTCCAGTGACTGCTTTTGCATTCGCAAGTCCTAAAGTT
GGAGATCTCCAATTTAAGGCAGCATTTGACAAACTGAAGCATCTTCATGTCTTGAGGATT
CACAATTTAATGGATATTGTTCCAAAATACCCACCCATTGGCTATTTTGACGTTGGGAAG
GAGCTAATGATTGATACCACAAAATCTCCCTATGTGAAACCTCCTGGAGAACCTCTCAGC
TGGCATTTGTTGGAGCCGTACTTGCATGGAGTCGCTGGAACTCAAGGTTTAGGAATTTTT
GCAGGTTTTAAACTAGAGGTGAATCGTGATATCTCACTTGTCAACAAGCAGTGGAACATT
TTGAAAGACGAATATTGTATTCCTGGGAGGTGGTGGGTTGAGAAGTGCAAAGGGATGGTT
CAACAAGAAGATGGATCTTGGCTTATGTTAGATCGCGATGAGTATGAGTTCTAA