Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026485
CDS Infomation

pacid=37425688 polypeptide=PGSC0003DMP400018070 locus=PGSC0003DMG400010220 ID=PGSC0003DMT400026485.v4.03 annot-version=v4.03
Sequence

ATGGCTTGCATATTTGCTGATAAATGGGAGGAACTTAGTGGGAAAAACAATTGGGATGGG
CTATTAAACCCCTTGGATCTTGATCTTCGCAAATATATCATTCAATATGGAGAATTGGCT
CAAGCAACTTATGACACTTTCATCTCAGAGAGAGCGTCTAAATATGCAGGAGCTAGCAGA
TACTCGATGGAAAACTTTTTTACTAAGGTTGGACTTGACCCAAAAAAGTATTGTGTAACC
AAATATTTCTATGCTACCTCATCCATGCCACTTCCTGATGCTTTCATTACAAAATCATTT
TCAAGAGAAGCATGGAGTAAGGAATCAAATTTTATGGGATATATTGCTGTGGCTACTGAT
GAGGGTAAAGCTTCACTAGGAAGGAGGGATATTGTGATTAATTGGAGAGGAACTTTGCAA
GTATTGGAGTGGGTAAATGACCTTCAATTTTTACTTGTCCCAGCACCCAAAGTTTTTGGT
GATGGAGGTTTGCTTCCTTTGTTTCATCCTTTGGTACATCATGGCTTCCATAACATTTAT
ACAACGGAAAATCCACGATCACAGTTTAATAAAACTTGTGTTAGGGATCAGGTAATGGAA
GAAGTGAAAAGATTGGTGGAGGAATATAAGCATGAAGAGGTGAGCATAACTGTGACTGGA
CACAGCCTAGGTGCATCACTTGCAACTCTGAATGCAGTTGACATAGCTTTCAATAAAATC
AACAAAGCAAGTAATGGCAAGGAGTTTCCAGTAACTGCTTTTGTATTCGCAAGTCCTAAA
GTTGGAGATGTGAATTTTCTCAATGCATTTTCCAAACTGAAGCATCTTCACATCTTGAGG
ATTCATAATTTATTGGATATTGTTCCAAAATACCCACCCATTGGGTATTTTGACGTTGGG
CAGGAGATAATGATTGATACAACAAAATCTCCGTATGTGAAGCCTCCAGGAGAACCTGTG
AGCTGGCATTTGTTGGAACCATACTTGCATGGAATTGCTGGGACTCAAGGAATTGGAATG
TTTGCAGGTTTTAAGCTAGAAGTGAATCGCGATATTTCACTTGTGAACAAGCAGTGGAAC
ATACTGAAAGATGAACATTGTATTCCTCCCCTTTGGTGGTCTGAGAAGCACAAAGGAATG
GTTCAACAAGAAGATGGATGTTGGCTTCTCCAGGATCGTGATGAGTATGATTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400018070
PEP Infomation

pacid=37425688 transcript=PGSC0003DMT400026485 locus=PGSC0003DMG400010220 ID=PGSC0003DMT400026485.v4.03 annot-version=v4.03
Sequence

MACIFADKWEELSGKNNWDGLLNPLDLDLRKYIIQYGELAQATYDTFISERASKYAGASR
YSMENFFTKVGLDPKKYCVTKYFYATSSMPLPDAFITKSFSREAWSKESNFMGYIAVATD
EGKASLGRRDIVINWRGTLQVLEWVNDLQFLLVPAPKVFGDGGLLPLFHPLVHHGFHNIY
TTENPRSQFNKTCVRDQVMEEVKRLVEEYKHEEVSITVTGHSLGASLATLNAVDIAFNKI
NKASNGKEFPVTAFVFASPKVGDVNFLNAFSKLKHLHILRIHNLLDIVPKYPPIGYFDVG
QEIMIDTTKSPYVKPPGEPVSWHLLEPYLHGIAGTQGIGMFAGFKLEVNRDISLVNKQWN
ILKDEHCIPPLWWSEKHKGMVQQEDGCWLLQDRDEYDF*

Transcript Sequence

Transcript ID

PGSC0003DMT400026485
Transcript Infomation

pacid=37425688 locus=PGSC0003DMG400010220 ID=PGSC0003DMT400026485.v4.03 annot-version=v4.03
Sequence

ATGGCTTGCATATTTGCTGATAAATGGGAGGAACTTAGTGGGAAAAACAATTGGGATGGG
CTATTAAACCCCTTGGATCTTGATCTTCGCAAATATATCATTCAATATGGAGAATTGGCT
CAAGCAACTTATGACACTTTCATCTCAGAGAGAGCGTCTAAATATGCAGGAGCTAGCAGA
TACTCGATGGAAAACTTTTTTACTAAGGTTGGACTTGACCCAAAAAAGTATTGTGTAACC
AAATATTTCTATGCTACCTCATCCATGCCACTTCCTGATGCTTTCATTACAAAATCATTT
TCAAGAGAAGCATGGAGTAAGGAATCAAATTTTATGGGATATATTGCTGTGGCTACTGAT
GAGGGTAAAGCTTCACTAGGAAGGAGGGATATTGTGATTAATTGGAGAGGAACTTTGCAA
GTATTGGAGTGGGTAAATGACCTTCAATTTTTACTTGTCCCAGCACCCAAAGTTTTTGGT
GATGGAGGTTTGCTTCCTTTGTTTCATCCTTTGGTACATCATGGCTTCCATAACATTTAT
ACAACGGAAAATCCACGATCACAGTTTAATAAAACTTGTGTTAGGGATCAGGTAATGGAA
GAAGTGAAAAGATTGGTGGAGGAATATAAGCATGAAGAGGTGAGCATAACTGTGACTGGA
CACAGCCTAGGTGCATCACTTGCAACTCTGAATGCAGTTGACATAGCTTTCAATAAAATC
AACAAAGCAAGTAATGGCAAGGAGTTTCCAGTAACTGCTTTTGTATTCGCAAGTCCTAAA
GTTGGAGATGTGAATTTTCTCAATGCATTTTCCAAACTGAAGCATCTTCACATCTTGAGG
ATTCATAATTTATTGGATATTGTTCCAAAATACCCACCCATTGGGTATTTTGACGTTGGG
CAGGAGATAATGATTGATACAACAAAATCTCCGTATGTGAAGCCTCCAGGAGAACCTGTG
AGCTGGCATTTGTTGGAACCATACTTGCATGGAATTGCTGGGACTCAAGGAATTGGAATG
TTTGCAGGTTTTAAGCTAGAAGTGAATCGCGATATTTCACTTGTGAACAAGCAGTGGAAC
ATACTGAAAGATGAACATTGTATTCCTCCCCTTTGGTGGTCTGAGAAGCACAAAGGAATG
GTTCAACAAGAAGATGGATGTTGGCTTCTCCAGGATCGTGATGAGTATGATTTCTGA