Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026450
CDS Infomation

pacid=37424958 polypeptide=PGSC0003DMP400018056 locus=PGSC0003DMG400010209 ID=PGSC0003DMT400026450.v4.03 annot-version=v4.03
Sequence

ATGCCAAATACTCCAAAAACAACTAGTTCTACAAGTAGTAATTTTTATTTGACTTACATA
AAGCTAAGGTTCTTCACTAAACTCAAGCGGTTCCTTCAAATTAAGGCTAAATCTAAGGAA
CAATTTCAACCGTCTGATCATCAGCCAACTAACGATTCAGAAATTTTGATTGTGATTGAA
GAAAAGGGTATTATGGGAAAAGAGAGTGATAAAGATAATGGATGGATGATTTTGCAAAAA
TCTGTGAAGAAACTTCACTTTGGGAACTGGGATGAAAAAGAGGTGGCAGTGAAAGAGATA
ATAAAGTTGGCTAAAGAGGATTTGAAGAGGCGGAAATTCATGGCGGAGCTCGGTGTGATT
CCGCCGCTTGTTGCCATGGTTGGTGGTTCTGATCAGGCGGTGTTGCGGCGGCAGAGATTA
GCGGTGCAAGCACTGACCCAACTTGCTAATGGCTCTTTCACTAACAAGGCTCTGATGGTA
GAAGCAGGAATCTTATCAAAATTACCTCAAAAAACAGACAACTTAGATGGAAACACAAGG
CAAGAATTTGCAGAATTGATCTTGTCTATATCATTATTAGCCAACACACAATTCAATATG
GATTCCTCAAGAATTATTTCATTTGTAGTCAGCATTCTTGATTCATCAAATTCAAGTGTT
GAGACTAAATGTACATGTCTAGGGACATTGTACAACATATCCTCTGTGTTGGAAAATTCC
GCCAGTTTGGCGACTAATGGAACAGTGACCACATTATTGAGATTGTCTTCATTAAAGGAA
GTATCAGAGAAAGCACTTGCCACATTAGGGAATCTTGTGGTTACCCTAATGGGAAAGAAG
GCGATGGAGGAAAGCCCGATGATGCCCGATAGCTTAATGGAGATAATGACATGGGAAGAG
CAACCGAAATGTCAAGAGTTATCGGTATACATTTTGATGATTTTGGCTCACCAAAGTTCT
ATTCAAAGAGAGAAAATGTCCAAGGCTGGTATTGTTCCAGTACTTCTTGAAGTGGCATTG
TTAGGTAGTTCTTTGGCTCAAAAAAGAGCATTGAAATTGTTGCAATGGTTTAAGGATGAA
AGGCAGAGCAAAATGGGGCCTCATTCAGGGCCACAAGTAGGAAGGATGCCAATTGATTCA
TCACCAATGAGTCCAAGAGCTGTTGATGAAAACAAGAAACTGATGAAGAAAATTGTGAAA
CAAAGCCTTTATAAGAATATGGAAACAATTACTAGTAGAGCCAATGGGGGTGGTGATTCT
TCAAGGTTTAAGTCCTTAGTTGTTAGCTCAAGTTCTAAGAGTTTGCCTTACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400018056
PEP Infomation

pacid=37424958 transcript=PGSC0003DMT400026450 locus=PGSC0003DMG400010209 ID=PGSC0003DMT400026450.v4.03 annot-version=v4.03
Sequence

MPNTPKTTSSTSSNFYLTYIKLRFFTKLKRFLQIKAKSKEQFQPSDHQPTNDSEILIVIE
EKGIMGKESDKDNGWMILQKSVKKLHFGNWDEKEVAVKEIIKLAKEDLKRRKFMAELGVI
PPLVAMVGGSDQAVLRRQRLAVQALTQLANGSFTNKALMVEAGILSKLPQKTDNLDGNTR
QEFAELILSISLLANTQFNMDSSRIISFVVSILDSSNSSVETKCTCLGTLYNISSVLENS
ASLATNGTVTTLLRLSSLKEVSEKALATLGNLVVTLMGKKAMEESPMMPDSLMEIMTWEE
QPKCQELSVYILMILAHQSSIQREKMSKAGIVPVLLEVALLGSSLAQKRALKLLQWFKDE
RQSKMGPHSGPQVGRMPIDSSPMSPRAVDENKKLMKKIVKQSLYKNMETITSRANGGGDS
SRFKSLVVSSSSKSLPY*

Transcript Sequence

Transcript ID

PGSC0003DMT400026450
Transcript Infomation

pacid=37424958 locus=PGSC0003DMG400010209 ID=PGSC0003DMT400026450.v4.03 annot-version=v4.03
Sequence

ATGCCAAATACTCCAAAAACAACTAGTTCTACAAGTAGTAATTTTTATTTGACTTACATA
AAGCTAAGGTTCTTCACTAAACTCAAGCGGTTCCTTCAAATTAAGGCTAAATCTAAGGAA
CAATTTCAACCGTCTGATCATCAGCCAACTAACGATTCAGAAATTTTGATTGTGATTGAA
GAAAAGGGTATTATGGGAAAAGAGAGTGATAAAGATAATGGATGGATGATTTTGCAAAAA
TCTGTGAAGAAACTTCACTTTGGGAACTGGGATGAAAAAGAGGTGGCAGTGAAAGAGATA
ATAAAGTTGGCTAAAGAGGATTTGAAGAGGCGGAAATTCATGGCGGAGCTCGGTGTGATT
CCGCCGCTTGTTGCCATGGTTGGTGGTTCTGATCAGGCGGTGTTGCGGCGGCAGAGATTA
GCGGTGCAAGCACTGACCCAACTTGCTAATGGCTCTTTCACTAACAAGGCTCTGATGGTA
GAAGCAGGAATCTTATCAAAATTACCTCAAAAAACAGACAACTTAGATGGAAACACAAGG
CAAGAATTTGCAGAATTGATCTTGTCTATATCATTATTAGCCAACACACAATTCAATATG
GATTCCTCAAGAATTATTTCATTTGTAGTCAGCATTCTTGATTCATCAAATTCAAGTGTT
GAGACTAAATGTACATGTCTAGGGACATTGTACAACATATCCTCTGTGTTGGAAAATTCC
GCCAGTTTGGCGACTAATGGAACAGTGACCACATTATTGAGATTGTCTTCATTAAAGGAA
GTATCAGAGAAAGCACTTGCCACATTAGGGAATCTTGTGGTTACCCTAATGGGAAAGAAG
GCGATGGAGGAAAGCCCGATGATGCCCGATAGCTTAATGGAGATAATGACATGGGAAGAG
CAACCGAAATGTCAAGAGTTATCGGTATACATTTTGATGATTTTGGCTCACCAAAGTTCT
ATTCAAAGAGAGAAAATGTCCAAGGCTGGTATTGTTCCAGTACTTCTTGAAGTGGCATTG
TTAGGTAGTTCTTTGGCTCAAAAAAGAGCATTGAAATTGTTGCAATGGTTTAAGGATGAA
AGGCAGAGCAAAATGGGGCCTCATTCAGGGCCACAAGTAGGAAGGATGCCAATTGATTCA
TCACCAATGAGTCCAAGAGCTGTTGATGAAAACAAGAAACTGATGAAGAAAATTGTGAAA
CAAAGCCTTTATAAGAATATGGAAACAATTACTAGTAGAGCCAATGGGGGTGGTGATTCT
TCAAGGTTTAAGTCCTTAGTTGTTAGCTCAAGTTCTAAGAGTTTGCCTTACTAG