Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026448
CDS Infomation

pacid=37427056 polypeptide=PGSC0003DMP400018054 locus=PGSC0003DMG400010207 ID=PGSC0003DMT400026448.v4.03 annot-version=v4.03
Sequence

ATGGCCATATTTACAAATCCTAGCAAATACATTTGCTTAGCTTTTCTCTTCCTAGTTTTT
GGACTTTGGAGCTCTCAATTAGTTTCATCACGTCCAATCAACTATGAGACAACCATGCGA
GTTAGGCATGAGCAATGGATTGCCCATCATGACAAAATTTACAACGATTTGAAAGAGAAA
GAAATGCGTTTTAAGATATTCAAAGAAAACGTGAAACGTATAGAAACTTTTAATGCAGGA
GAAGATAAAGGGTACAAACTTGGCGTTAATAAATTTGCTGATCTCACGAATGAAGAGTTT
CGTGTGGTGCATACAGGTTACAAGAGTTCATTTATGTCCTCCTCAAAGCCAAAAACACAT
TTTAGGTACGCTAATATAACAGACGTACCGCCAACTATGGATTGGAGAAAGAAAGGAGCT
GTTACCCCTATCAAGGACCAAATGGAATGTGGGTCCTGTTGGGCATTTTCTGCAGTAGCA
GCTATGGAAGGCGTACACCAAGTAACAACAGGAAAATTAATCCCTTTATCAGAGCAAGAG
CTTGTAGATTGTGATGTCGAAGGCGAGGACGTAGGTTGCACCGGAGGACTCTTGGATACT
GCCTTTCAATTCATCATAAAAAATAAGGGCCTCACTACAGAAGCAAATTATCCATACGAG
GCAGCAGATGGTGTCTGCAACAAGAAAAAATCAGCTGTTTCAGTAGCAAAGATTACAGGA
TATGAAGATGTGCCGGCCAACAACGAGAAGGCCCTTTTGCAAGCTGTGGCTAATCAACCC
GTGTCGGTGGCCATCGATGGGAGTAGCTTCGATTTCCAGTTTTATTCAAGTGGTGTATTT
AGTGGATCATGCAGCACTTGGCTTAACCATGCTGTTACAGCAGTGGGATATGGTGCTGCA
AGTGATGGTGCAAAATATTGGATTATAAAGAATTCATGGGGCAGTAAATGGGGTGAAAAT
GGATATGCACACATGAAAAGGGATATTGATGATAAAAAAGGCCTTTGTGGACTTGCCATG
AAGGCTTCTTATCCCACTGCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400018054
PEP Infomation

pacid=37427056 transcript=PGSC0003DMT400026448 locus=PGSC0003DMG400010207 ID=PGSC0003DMT400026448.v4.03 annot-version=v4.03
Sequence

MAIFTNPSKYICLAFLFLVFGLWSSQLVSSRPINYETTMRVRHEQWIAHHDKIYNDLKEK
EMRFKIFKENVKRIETFNAGEDKGYKLGVNKFADLTNEEFRVVHTGYKSSFMSSSKPKTH
FRYANITDVPPTMDWRKKGAVTPIKDQMECGSCWAFSAVAAMEGVHQVTTGKLIPLSEQE
LVDCDVEGEDVGCTGGLLDTAFQFIIKNKGLTTEANYPYEAADGVCNKKKSAVSVAKITG
YEDVPANNEKALLQAVANQPVSVAIDGSSFDFQFYSSGVFSGSCSTWLNHAVTAVGYGAA
SDGAKYWIIKNSWGSKWGENGYAHMKRDIDDKKGLCGLAMKASYPTA*

Transcript Sequence

Transcript ID

PGSC0003DMT400026448
Transcript Infomation

pacid=37427056 locus=PGSC0003DMG400010207 ID=PGSC0003DMT400026448.v4.03 annot-version=v4.03
Sequence

ATGGCCATATTTACAAATCCTAGCAAATACATTTGCTTAGCTTTTCTCTTCCTAGTTTTT
GGACTTTGGAGCTCTCAATTAGTTTCATCACGTCCAATCAACTATGAGACAACCATGCGA
GTTAGGCATGAGCAATGGATTGCCCATCATGACAAAATTTACAACGATTTGAAAGAGAAA
GAAATGCGTTTTAAGATATTCAAAGAAAACGTGAAACGTATAGAAACTTTTAATGCAGGA
GAAGATAAAGGGTACAAACTTGGCGTTAATAAATTTGCTGATCTCACGAATGAAGAGTTT
CGTGTGGTGCATACAGGTTACAAGAGTTCATTTATGTCCTCCTCAAAGCCAAAAACACAT
TTTAGGTACGCTAATATAACAGACGTACCGCCAACTATGGATTGGAGAAAGAAAGGAGCT
GTTACCCCTATCAAGGACCAAATGGAATGTGGGTCCTGTTGGGCATTTTCTGCAGTAGCA
GCTATGGAAGGCGTACACCAAGTAACAACAGGAAAATTAATCCCTTTATCAGAGCAAGAG
CTTGTAGATTGTGATGTCGAAGGCGAGGACGTAGGTTGCACCGGAGGACTCTTGGATACT
GCCTTTCAATTCATCATAAAAAATAAGGGCCTCACTACAGAAGCAAATTATCCATACGAG
GCAGCAGATGGTGTCTGCAACAAGAAAAAATCAGCTGTTTCAGTAGCAAAGATTACAGGA
TATGAAGATGTGCCGGCCAACAACGAGAAGGCCCTTTTGCAAGCTGTGGCTAATCAACCC
GTGTCGGTGGCCATCGATGGGAGTAGCTTCGATTTCCAGTTTTATTCAAGTGGTGTATTT
AGTGGATCATGCAGCACTTGGCTTAACCATGCTGTTACAGCAGTGGGATATGGTGCTGCA
AGTGATGGTGCAAAATATTGGATTATAAAGAATTCATGGGGCAGTAAATGGGGTGAAAAT
GGATATGCACACATGAAAAGGGATATTGATGATAAAAAAGGCCTTTGTGGACTTGCCATG
AAGGCTTCTTATCCCACTGCCTAA