Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026353
CDS Infomation

pacid=37461861 polypeptide=PGSC0003DMP400017998 locus=PGSC0003DMG400010165 ID=PGSC0003DMT400026353.v4.03 annot-version=v4.03
Sequence

ATGGATCAATCACCATTGCTAAATGACTTCTCCGGCGAGCACTGGCAGCTTATTGACTCC
GACGGTGACTACCGGCCTATTTCTAGCATGAATATGAATGAATTGTGGGATGTATTCTGG
ATTGAAACAGTGAAGCTATGGGAGATTGGAGGCCCAATTGCTTTCAATATCGTCTGTCAA
TACGGACTCTATGCTATCACTGTTGCTTTCTGTGGTCATCTTGGACCTACAGAGCTCTCT
GCTGTTACCCTTGCTCAAACTGTCATCGGCACTTTCATTTTTGGCTTCATGATAGGCATG
GGGAGTGCTCTGGAGACGCTCTGTGGACAGGCATTTGGTGCTGGGCAAGTACACATGCTT
GGAGTTTACACACAACGCTCAATGATAATTCTATTGCTGAGTACCTTCCTTCTCTTACCA
ATCTATCTTTTCGCAACTCCTATACTTAAGTTCCTAGGCCAAGATCATGATATTGCTGTT
GTTGCTGGGAAGTTCGCCATGTTAACCATTCCCGAGTTATATTCCCTGTCTGTTAACATT
CCCACTTCAAAATTTCTTCAAGCCCAGAGTAAAGTTGGTGTGCTGGCCTGGATTGGTTTT
GTGGCTCTCGTACTCCATGCTATTCTCCTTTGGCTCTTCATTTATGTATTCAATTGGGGT
TTGACCGGGGCAGCAATATCCTTTAATCTCGTAGGCTGGGTCAACGCACTAGCTCAATTT
GCTTACGTAGTTTTTTGGTGCAAGGATGGATGGAAGGGATGGTCTTGGTCTGCATTCAAT
GAGATTTGGGCCTTTGTTAGACTGTCAATTGAATCGGCTGTTATGCTATGCCTAGAAACC
TGGTATATGATGAGTATTATTCTCCTCACTGGTCATCTCAAAGATGCAGTTACTGCAGTT
GGAGCCCTCTCTATTTGCATAAATGTCGATGGATGGGAAGCAATGTTTTTCATTGGAGTC
AATGCTGCCATAAGTGTTCGGGTCTCAAATGAGCTTGGGCTAGGACGTGCCAGGGCGACC
AAATGTAGTGTCGTTGTCACAGTGTTTCAGTCACTTCTCATTGGGATACTCTGCATGATT
GTAGTACTTGCATTAAGAAGTCATCTAGCCATTCTTTACACCGACAGCGAGGTTTTGAAA
CGATCTGTTTCTGAGCTTGCTTGGTTTCTTGGAGTAACAATGCTTCTCAATAGTGTTCAA
CCTGTGATATCAGGTGTTGCTGTTGGAGGCGGATGGCAAGGTCTCGTGGCTTACATCAAT
TTGGGTTCTTACTACATTTTTGGTATTCCTCTCGGATATCTTCTTGGCTATGTAGCTAAC
TTCGGAGTCATGGGACTATGGGGAGGAATGATAGGTGGACTAGCTTTGCAAACACTACTA
CTCTCGATTGTACTCTACAGAATTGACTGGAATAAAGAGGTTGAGCAGACAACAGAACGG
ATGCGAATCTGGGGAGGTCAAGACTTAGAAACAGAGAAAAAACTCCAAATCCCAAATTTC
ACAACGGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017998
PEP Infomation

pacid=37461861 transcript=PGSC0003DMT400026353 locus=PGSC0003DMG400010165 ID=PGSC0003DMT400026353.v4.03 annot-version=v4.03
Sequence

MDQSPLLNDFSGEHWQLIDSDGDYRPISSMNMNELWDVFWIETVKLWEIGGPIAFNIVCQ
YGLYAITVAFCGHLGPTELSAVTLAQTVIGTFIFGFMIGMGSALETLCGQAFGAGQVHML
GVYTQRSMIILLLSTFLLLPIYLFATPILKFLGQDHDIAVVAGKFAMLTIPELYSLSVNI
PTSKFLQAQSKVGVLAWIGFVALVLHAILLWLFIYVFNWGLTGAAISFNLVGWVNALAQF
AYVVFWCKDGWKGWSWSAFNEIWAFVRLSIESAVMLCLETWYMMSIILLTGHLKDAVTAV
GALSICINVDGWEAMFFIGVNAAISVRVSNELGLGRARATKCSVVVTVFQSLLIGILCMI
VVLALRSHLAILYTDSEVLKRSVSELAWFLGVTMLLNSVQPVISGVAVGGGWQGLVAYIN
LGSYYIFGIPLGYLLGYVANFGVMGLWGGMIGGLALQTLLLSIVLYRIDWNKEVEQTTER
MRIWGGQDLETEKKLQIPNFTTA*

Transcript Sequence

Transcript ID

PGSC0003DMT400026353
Transcript Infomation

pacid=37461861 locus=PGSC0003DMG400010165 ID=PGSC0003DMT400026353.v4.03 annot-version=v4.03
Sequence

ATGGATCAATCACCATTGCTAAATGACTTCTCCGGCGAGCACTGGCAGCTTATTGACTCC
GACGGTGACTACCGGCCTATTTCTAGCATGAATATGAATGAATTGTGGGATGTATTCTGG
ATTGAAACAGTGAAGCTATGGGAGATTGGAGGCCCAATTGCTTTCAATATCGTCTGTCAA
TACGGACTCTATGCTATCACTGTTGCTTTCTGTGGTCATCTTGGACCTACAGAGCTCTCT
GCTGTTACCCTTGCTCAAACTGTCATCGGCACTTTCATTTTTGGCTTCATGATAGGCATG
GGGAGTGCTCTGGAGACGCTCTGTGGACAGGCATTTGGTGCTGGGCAAGTACACATGCTT
GGAGTTTACACACAACGCTCAATGATAATTCTATTGCTGAGTACCTTCCTTCTCTTACCA
ATCTATCTTTTCGCAACTCCTATACTTAAGTTCCTAGGCCAAGATCATGATATTGCTGTT
GTTGCTGGGAAGTTCGCCATGTTAACCATTCCCGAGTTATATTCCCTGTCTGTTAACATT
CCCACTTCAAAATTTCTTCAAGCCCAGAGTAAAGTTGGTGTGCTGGCCTGGATTGGTTTT
GTGGCTCTCGTACTCCATGCTATTCTCCTTTGGCTCTTCATTTATGTATTCAATTGGGGT
TTGACCGGGGCAGCAATATCCTTTAATCTCGTAGGCTGGGTCAACGCACTAGCTCAATTT
GCTTACGTAGTTTTTTGGTGCAAGGATGGATGGAAGGGATGGTCTTGGTCTGCATTCAAT
GAGATTTGGGCCTTTGTTAGACTGTCAATTGAATCGGCTGTTATGCTATGCCTAGAAACC
TGGTATATGATGAGTATTATTCTCCTCACTGGTCATCTCAAAGATGCAGTTACTGCAGTT
GGAGCCCTCTCTATTTGCATAAATGTCGATGGATGGGAAGCAATGTTTTTCATTGGAGTC
AATGCTGCCATAAGTGTTCGGGTCTCAAATGAGCTTGGGCTAGGACGTGCCAGGGCGACC
AAATGTAGTGTCGTTGTCACAGTGTTTCAGTCACTTCTCATTGGGATACTCTGCATGATT
GTAGTACTTGCATTAAGAAGTCATCTAGCCATTCTTTACACCGACAGCGAGGTTTTGAAA
CGATCTGTTTCTGAGCTTGCTTGGTTTCTTGGAGTAACAATGCTTCTCAATAGTGTTCAA
CCTGTGATATCAGGTGTTGCTGTTGGAGGCGGATGGCAAGGTCTCGTGGCTTACATCAAT
TTGGGTTCTTACTACATTTTTGGTATTCCTCTCGGATATCTTCTTGGCTATGTAGCTAAC
TTCGGAGTCATGGGACTATGGGGAGGAATGATAGGTGGACTAGCTTTGCAAACACTACTA
CTCTCGATTGTACTCTACAGAATTGACTGGAATAAAGAGGTTGAGCAGACAACAGAACGG
ATGCGAATCTGGGGAGGTCAAGACTTAGAAACAGAGAAAAAACTCCAAATCCCAAATTTC
ACAACGGCTTAA