Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026296
CDS Infomation

pacid=37462934 polypeptide=PGSC0003DMP400017959 locus=PGSC0003DMG400010150 ID=PGSC0003DMT400026296.v4.03 annot-version=v4.03
Sequence

ATGCTCGGTGTCCTTAGGAGATCAGGTAATGACATTAAGAAAGATCCAGACATAGATGAC
AGTACCTTGTCTCGGAAATCTCTGGAGGTGCTAAAGTTTAGTTCATCTCCCACGGTTGTA
TATATTCGTTGCTGCAAATCACAGTGCTCTACAGATGTGACATTCTTTGCTTTGGAACCC
AGTGGACGATGGAGAGTTCTTGTTCTTCCACAGCAATATCTCTACCGTGAGATCTGTTGG
AAATCACCTCAATCAAATGTAAATAGCTTGCAAGTTGGTTCTTTGTTGCCATTAACTTCT
CTCTTATTTGGTAGACAGAAGATTCAAAGAGTTATGAATGTTGACTCTACTCTTGAATCA
ATTATGTCTAGCAGCTCTCTACACCATGAAGGTTCTTTGAGCAATCTAAATGAATGGAAC
ATGTTATCAATCACTTCTTCTGGTCAAAATCCAATCACCAAATGTGAATTTCCTGGAACC
ATCACCCACAGATCTGATGCTATTAGTGTAGAAGATATGTACACTCATGACTCTAAGAAA
GAAAAATCCACAGACAAGTACTCAAGGAAGAAACCTAGGAAGAAGGGGAAACGGAACAGA
AATCTCAAGTGCAGTAATGGCCTAAATGAGCTGCAATCTGCAGTTGGATGTTCAATAACT
CAAGCTGTGATACAAAATATACAGCATAGATCAATTAGTTCTTCTGCTAATATTTGTAAT
TCCTTGATGAATGATGCCATGACTGTGAGCTCTATTTCTCTTGGTTCAAGCAGTGATGAA
AGATGTAGTCAGCGTGTCTGTAAATCACCTCATCCTATTGCCAGAACAGAGGTTTCTTCT
AGTGAAGACATCTTAAAGAGTGCAAAGCTGGACGGACCAGGTCAAATTGAGGAGCTTAGA
GAGAGGGAAGTGTGTTCAAAGCAGCATGCTGGAAATCTTTATGGAACAGAAAAGAGGGAC
AAGTACATTAGAAGAGTTCCCAATGACTCAAATGTCTATGCAAGTAGTACCAGGAACCAG
AATAGCCATTCGAGGAATTATCAGTATATTTGGAAAAGGGTTCAGAAGAGTGATGCTGAT
GTAAGCAACTGTGACTTGGAAAAGTTGAACTTAGGTTTCTCACAGTCTGATGATAGGTTG
AAAAAGAATACATTGAAGAAAAAGTTAACTAATCCTGTTGATTCTATTATATTGTCACAA
TCAGCCCATGAAAATCAGGAAAAGCTCAAATTCCCTAAAAACCCCAGAAGACATAAGTAT
CCAGGCTCACTGCAGGAGAATGAAAGTCAATGTGGAAAAGGATCTCCAGTTAATGGAAAC
TGTTCAAATGCTTGTTTGAAGACTAACATGCAATCAGATCCTTGCCAAATAGCTTCGGCA
AAAAGATCAATAAATGTAGCAGATTCTCAAACTAGAACAAGTTCTTTTAGGGCTAGATAC
AAGAAAAGGAATGTTCAGTATGTCCCTTTAAAACCAATCCCGAATCCCAAATCTTGTCCC
CGTGACTTGGAAGCTAAAGAAAATGCCCCAATTGTTGTATCCGGCTTGGATGATCAAATG
GTCGAACATCAGTTTTTGTTACCTCGATCAGAGAAATTCAATGGCCTGACAGAGCAGCAG
GGGGAGCTTCTTGCTGTGGATGGAGAGGGTGATAAAATGGACAAAGAAGTTTCTCCTTCT
GGTCAAATTAAGCATGAGCATAGCACTGTCCCTCAAGCTATCTCCAAATCCTGGATGCAC
CAAGAGCTTAAAGATTCTGAGCTACCAAATTGTTTGTCAGTGGGGACGCTTGTTGAACCA
GAAAGATGGACCTCCAAAAATGCCACACAGGAGCAACTGGCTTCTAAATGTCTAGCTCCT
GTTTTTTCCTCAGTGATTGTCAGAGTGAAAAATGCAGGTCAAAATGTAGAAAATATTAAG
GCATCACCTGGTGATACTCAGTTTGGGAAGTTGAAAAATCATAGCATGCGCACTCGAGAA
CCGGGCTGCAACAATGCTGCTATGGAAACGTTCTTCAATCCTGAAACTAAAAGCAAAACC
TTTCAGAGTCTCGAAAATGATTGGAGAAACATTGCTCAGGCAGTGAACGATGCCCATAGG
GTACAGCTAGCCTCTAAATCCATTGAGATAGGTAAGGGATATCCTGCTGCTGAATTTGAG
AAACTTCTTCATTCTGCCTCTCCAATTATATGCCCATCTGCTAGTATTCAGACTTGTCAG
GCTTGCTTCCCTAGTCGAGCTACTAATGCACCTCTCTGCAGACATGAGATACCCAATGTC
GCTTTGAAGAACTTGTGGCAGTGGTATGAGAAACATGGGAGCTATGGTTTAGAAGTAAAA
GCGGAGGACCACGGAAATGCAAGACAATGTGGGATGGATGGTTTCGAGTTTCGTGCATAT
TTTGTTCCATATTTGTCAGCCATTCAGCTTTTCAAGGACCATAGGACTCATCCAATCCAT
AATGATAAAAGGAATCTGGGGTCCATGGAGGTGGACTGTAAGATGAATAAAATATCTGAG
GGTTCACCTAAAGTAGAGCTGCATTCAATATTTTCTGTACTTGTACCTCAACCTCGTGCT
GAGGATTCAAGCTCTTTACTACAAAAAGGTGATCTCTCTGAATCAGGGTCATCTTCAGAG
TGCAGTACTGCTGATTCACATCATCTACCAGATGAATTTGAGTTGTCTGATGATACGGAG
CTTCTCTTTGAGTATTTTGAATCTGAGCAGCCTCAAAGGCGGCGACCCTTGTTTGAAACA
ATACAGGAACTTGTCTCTGGTGATGGACCCCCCTCAAACTGTAGATCATATGGAGATCCA
TCCATCCTACATACAGGGAGCTTACGTGACCTGCATCCTCATTCCTGGTTTTCGGTTGCA
TGGTACCCCATTTATAGGATACCCGATGGCAATTTGCGTGCTGCTTTCTTGACTTATCAT
TCACTTGGCCATTTTATTCACAGAGAGCAGTCATTTAAAAAGACTAGTGTGGATGCCTGT
ATGGTTTCTCCAATCGTAGGCCTCCAAAGCTACAATGCTCAGGGTGAATGCTGGTTTCAG
CCAAGGCACTCTGGTGACGACCTGACAGAAGAATTCTTGGATATGGACCTTCATACAGTT
ATGAGAGAGCGACTAAGAACATTAGAGCAGACTGCATCAATTATGTCACGAGCTGTGAGA
AAGATTGGAAGTGATACGCTCATGAACATACATCCTGATTATGAGTTTTTCCTGTCCAGG
CGACGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017959
PEP Infomation

pacid=37462934 transcript=PGSC0003DMT400026296 locus=PGSC0003DMG400010150 ID=PGSC0003DMT400026296.v4.03 annot-version=v4.03
Sequence

MLGVLRRSGNDIKKDPDIDDSTLSRKSLEVLKFSSSPTVVYIRCCKSQCSTDVTFFALEP
SGRWRVLVLPQQYLYREICWKSPQSNVNSLQVGSLLPLTSLLFGRQKIQRVMNVDSTLES
IMSSSSLHHEGSLSNLNEWNMLSITSSGQNPITKCEFPGTITHRSDAISVEDMYTHDSKK
EKSTDKYSRKKPRKKGKRNRNLKCSNGLNELQSAVGCSITQAVIQNIQHRSISSSANICN
SLMNDAMTVSSISLGSSSDERCSQRVCKSPHPIARTEVSSSEDILKSAKLDGPGQIEELR
EREVCSKQHAGNLYGTEKRDKYIRRVPNDSNVYASSTRNQNSHSRNYQYIWKRVQKSDAD
VSNCDLEKLNLGFSQSDDRLKKNTLKKKLTNPVDSIILSQSAHENQEKLKFPKNPRRHKY
PGSLQENESQCGKGSPVNGNCSNACLKTNMQSDPCQIASAKRSINVADSQTRTSSFRARY
KKRNVQYVPLKPIPNPKSCPRDLEAKENAPIVVSGLDDQMVEHQFLLPRSEKFNGLTEQQ
GELLAVDGEGDKMDKEVSPSGQIKHEHSTVPQAISKSWMHQELKDSELPNCLSVGTLVEP
ERWTSKNATQEQLASKCLAPVFSSVIVRVKNAGQNVENIKASPGDTQFGKLKNHSMRTRE
PGCNNAAMETFFNPETKSKTFQSLENDWRNIAQAVNDAHRVQLASKSIEIGKGYPAAEFE
KLLHSASPIICPSASIQTCQACFPSRATNAPLCRHEIPNVALKNLWQWYEKHGSYGLEVK
AEDHGNARQCGMDGFEFRAYFVPYLSAIQLFKDHRTHPIHNDKRNLGSMEVDCKMNKISE
GSPKVELHSIFSVLVPQPRAEDSSSLLQKGDLSESGSSSECSTADSHHLPDEFELSDDTE
LLFEYFESEQPQRRRPLFETIQELVSGDGPPSNCRSYGDPSILHTGSLRDLHPHSWFSVA
WYPIYRIPDGNLRAAFLTYHSLGHFIHREQSFKKTSVDACMVSPIVGLQSYNAQGECWFQ
PRHSGDDLTEEFLDMDLHTVMRERLRTLEQTASIMSRAVRKIGSDTLMNIHPDYEFFLSR
RR*

Transcript Sequence

Transcript ID

PGSC0003DMT400026296
Transcript Infomation

pacid=37462934 locus=PGSC0003DMG400010150 ID=PGSC0003DMT400026296.v4.03 annot-version=v4.03
Sequence

ATGCTCGGTGTCCTTAGGAGATCAGGTAATGACATTAAGAAAGATCCAGACATAGATGAC
AGTACCTTGTCTCGGAAATCTCTGGAGGTGCTAAAGTTTAGTTCATCTCCCACGGTTGTA
TATATTCGTTGCTGCAAATCACAGTGCTCTACAGATGTGACATTCTTTGCTTTGGAACCC
AGTGGACGATGGAGAGTTCTTGTTCTTCCACAGCAATATCTCTACCGTGAGATCTGTTGG
AAATCACCTCAATCAAATGTAAATAGCTTGCAAGTTGGTTCTTTGTTGCCATTAACTTCT
CTCTTATTTGGTAGACAGAAGATTCAAAGAGTTATGAATGTTGACTCTACTCTTGAATCA
ATTATGTCTAGCAGCTCTCTACACCATGAAGGTTCTTTGAGCAATCTAAATGAATGGAAC
ATGTTATCAATCACTTCTTCTGGTCAAAATCCAATCACCAAATGTGAATTTCCTGGAACC
ATCACCCACAGATCTGATGCTATTAGTGTAGAAGATATGTACACTCATGACTCTAAGAAA
GAAAAATCCACAGACAAGTACTCAAGGAAGAAACCTAGGAAGAAGGGGAAACGGAACAGA
AATCTCAAGTGCAGTAATGGCCTAAATGAGCTGCAATCTGCAGTTGGATGTTCAATAACT
CAAGCTGTGATACAAAATATACAGCATAGATCAATTAGTTCTTCTGCTAATATTTGTAAT
TCCTTGATGAATGATGCCATGACTGTGAGCTCTATTTCTCTTGGTTCAAGCAGTGATGAA
AGATGTAGTCAGCGTGTCTGTAAATCACCTCATCCTATTGCCAGAACAGAGGTTTCTTCT
AGTGAAGACATCTTAAAGAGTGCAAAGCTGGACGGACCAGGTCAAATTGAGGAGCTTAGA
GAGAGGGAAGTGTGTTCAAAGCAGCATGCTGGAAATCTTTATGGAACAGAAAAGAGGGAC
AAGTACATTAGAAGAGTTCCCAATGACTCAAATGTCTATGCAAGTAGTACCAGGAACCAG
AATAGCCATTCGAGGAATTATCAGTATATTTGGAAAAGGGTTCAGAAGAGTGATGCTGAT
GTAAGCAACTGTGACTTGGAAAAGTTGAACTTAGGTTTCTCACAGTCTGATGATAGGTTG
AAAAAGAATACATTGAAGAAAAAGTTAACTAATCCTGTTGATTCTATTATATTGTCACAA
TCAGCCCATGAAAATCAGGAAAAGCTCAAATTCCCTAAAAACCCCAGAAGACATAAGTAT
CCAGGCTCACTGCAGGAGAATGAAAGTCAATGTGGAAAAGGATCTCCAGTTAATGGAAAC
TGTTCAAATGCTTGTTTGAAGACTAACATGCAATCAGATCCTTGCCAAATAGCTTCGGCA
AAAAGATCAATAAATGTAGCAGATTCTCAAACTAGAACAAGTTCTTTTAGGGCTAGATAC
AAGAAAAGGAATGTTCAGTATGTCCCTTTAAAACCAATCCCGAATCCCAAATCTTGTCCC
CGTGACTTGGAAGCTAAAGAAAATGCCCCAATTGTTGTATCCGGCTTGGATGATCAAATG
GTCGAACATCAGTTTTTGTTACCTCGATCAGAGAAATTCAATGGCCTGACAGAGCAGCAG
GGGGAGCTTCTTGCTGTGGATGGAGAGGGTGATAAAATGGACAAAGAAGTTTCTCCTTCT
GGTCAAATTAAGCATGAGCATAGCACTGTCCCTCAAGCTATCTCCAAATCCTGGATGCAC
CAAGAGCTTAAAGATTCTGAGCTACCAAATTGTTTGTCAGTGGGGACGCTTGTTGAACCA
GAAAGATGGACCTCCAAAAATGCCACACAGGAGCAACTGGCTTCTAAATGTCTAGCTCCT
GTTTTTTCCTCAGTGATTGTCAGAGTGAAAAATGCAGGTCAAAATGTAGAAAATATTAAG
GCATCACCTGGTGATACTCAGTTTGGGAAGTTGAAAAATCATAGCATGCGCACTCGAGAA
CCGGGCTGCAACAATGCTGCTATGGAAACGTTCTTCAATCCTGAAACTAAAAGCAAAACC
TTTCAGAGTCTCGAAAATGATTGGAGAAACATTGCTCAGGCAGTGAACGATGCCCATAGG
GTACAGCTAGCCTCTAAATCCATTGAGATAGGTAAGGGATATCCTGCTGCTGAATTTGAG
AAACTTCTTCATTCTGCCTCTCCAATTATATGCCCATCTGCTAGTATTCAGACTTGTCAG
GCTTGCTTCCCTAGTCGAGCTACTAATGCACCTCTCTGCAGACATGAGATACCCAATGTC
GCTTTGAAGAACTTGTGGCAGTGGTATGAGAAACATGGGAGCTATGGTTTAGAAGTAAAA
GCGGAGGACCACGGAAATGCAAGACAATGTGGGATGGATGGTTTCGAGTTTCGTGCATAT
TTTGTTCCATATTTGTCAGCCATTCAGCTTTTCAAGGACCATAGGACTCATCCAATCCAT
AATGATAAAAGGAATCTGGGGTCCATGGAGGTGGACTGTAAGATGAATAAAATATCTGAG
GGTTCACCTAAAGTAGAGCTGCATTCAATATTTTCTGTACTTGTACCTCAACCTCGTGCT
GAGGATTCAAGCTCTTTACTACAAAAAGGTGATCTCTCTGAATCAGGGTCATCTTCAGAG
TGCAGTACTGCTGATTCACATCATCTACCAGATGAATTTGAGTTGTCTGATGATACGGAG
CTTCTCTTTGAGTATTTTGAATCTGAGCAGCCTCAAAGGCGGCGACCCTTGTTTGAAACA
ATACAGGAACTTGTCTCTGGTGATGGACCCCCCTCAAACTGTAGATCATATGGAGATCCA
TCCATCCTACATACAGGGAGCTTACGTGACCTGCATCCTCATTCCTGGTTTTCGGTTGCA
TGGTACCCCATTTATAGGATACCCGATGGCAATTTGCGTGCTGCTTTCTTGACTTATCAT
TCACTTGGCCATTTTATTCACAGAGAGCAGTCATTTAAAAAGACTAGTGTGGATGCCTGT
ATGGTTTCTCCAATCGTAGGCCTCCAAAGCTACAATGCTCAGGGTGAATGCTGGTTTCAG
CCAAGGCACTCTGGTGACGACCTGACAGAAGAATTCTTGGATATGGACCTTCATACAGTT
ATGAGAGAGCGACTAAGAACATTAGAGCAGACTGCATCAATTATGTCACGAGCTGTGAGA
AAGATTGGAAGTGATACGCTCATGAACATACATCCTGATTATGAGTTTTTCCTGTCCAGG
CGACGCTAA