Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026193
CDS Infomation

pacid=37427426 polypeptide=PGSC0003DMP400017893 locus=PGSC0003DMG400010093 ID=PGSC0003DMT400026193.v4.03 annot-version=v4.03
Sequence

ATGGCCTCTCCAGATTCTCCCCCATCTTTTTTTCCATTCCCAACTTTCCCCACAGCTACA
CCTTCAAATTCTACTTCTGATTCACCTCCTGCTCCTCCTCCTGACTCTTCATCTCCTCCT
CCTCCACCACCTGACTCTTCAGCTCCACCTCCTTCTCCACCAGCTCCAGATTCTCCTCCT
CCGTCAGAATCAAAATCACCTCCACCGGCAGAATCTCCTCCACCTCCACCTCCTACAGCA
GCGGCGCCACCACCTTCGGCGCCTCCTCCAAAGCCGTCAGTGTCACCACCACCACCTTCT
CCTAAGGCTCCTCCACCAGCTAATTCTCCCCCTCCAGCTTCATCTCCACCCCCACCATCA
AAAGATTCTCCTCCTCCTGCTCCTCCTCCTTCCCCACCTCCTCCCCCTCCAGCAGTTTCA
CCTTCTCCTCCACCACCAGTGAAAAATCAACCACCACCACCTGATTCTCCACCTCCTGCA
CCTGTTGCAAATCCGCCACAAAACTCCCCTCCACCTCCTGCATTGGCTCCCCCTCCAGCC
TCACTGCCATCTGCCCCTCCACCTAACCTCTTAACATCTCCACCCCCTTCTATTTCACCT
CCTGCTCCCCCAAATAATACTTCTCCAGCTGGAGCTCCCCCTCCATTACCTGTGACTCGC
CTTCCTACAGAGAAGCCCACTGCTATCCCTAAACCTGCTATCACTGCAGATTCAAGTGCC
AGAAATGGTGGGGGAAATAAGACAGGAAGTGTGGCGGCAATTGGTGTTGTTGCTGGGTTT
TTGGCCCTTAGCTTGGTCATTGTTGCTGTCTGGTTTACACGCAGGCGAAAGAAAAGAGAG
AGTGCATTTAATCTCAATTACCTGGGACCCTCTCCATTTGCTTCCTCACCAAATTCAGAT
ACATCATTCCTGAGATCAAGGTCTCAACATTCCACTTATCTAGCTCCAACCGGCTCACAA
AGCAATTTTATGTACTCTCCAGACCATGGAGGTATTGGAAATTCAAGATCATGGTTCACT
TACGAAGAATTATCTGAGGCAACAAATGGTTTTTCTCCTGATAGTGTTTTGGGTGAAGGA
GGGTTTGGATGTGTTTACAAAGGTGTTCTTAATGACGGAAGAGAAGTCGCTGTCAAACAG
CTGAAAAGTGGAAGTGGACAAGGGGAGCGGGAATTCAGAGCAGAAGTTGAGATTATCAGC
CGTGTGCACCATCGCCATTTGGTTTCACTTGTTGGTTACTGTATCTCAGAGCAGCAAAGG
TTACTTGTCTACGACTATGTGCCAAATGACACGCTTGACTATCACCTTCATGGTAAAGGC
ATGCAAACTATGGATTGGGCTACCCGAGTAAAAGTAGCTGCTGGTGCAGCACGTGGACTT
GCTTATCTTCATGAAGACTGTCATCCCCGCATTATCCATAGGGATATCAAAACATCAAAC
ATTCTCTTGGATATCAATTTTGAGGCACAGGTTGCTGATTTTGGCCTTGCAAGGTTAGCA
GGTGATGCCAGTAGTACACACGTGACAACTCGTGTGATGGGAACCTTTGGATACTTGGCA
CCAGAGTATGCATCTAGTGGAAAATTAACAGAGAAGTCTGATGTTTATTCATATGGCGTT
GTGCTTTTGGAGCTTATTACGGGACGGAAACCTGTTGACCAGTCTCAACCCTTAGGTGAT
GAAAGCCTGGTTGAATGGGCTCGACCTTTGCTTGCTCAAGCACTTGAGACTGAAAATTTT
GAAAATGTAGTAGATCCTAGGCTTGGAAACAACTTTGTTGCGGGTGAGATGTTCCGGATG
ATTGAAGCAGCTGCAGCTTGCGTTCGTCATTCAGGCTCTAAGAGGCCACGGATGAGTCAG
GTGGTTAGAGCTCTAGATTCCATGGATGAGCTGTCGGATCTGTCCAATGGAGTGAAACCT
GGACAAAGTGGAATTTTTGAGTCAAGGGAACAATCTGCACAGATAAGAATGTTTCAAAAG
ATGGCATTTGGAAGTCAAGAGTACAGTTCAGATTTCTTCAATTACTCCCAAGGCAGCTAT
AAAAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400017893
PEP Infomation

pacid=37427426 transcript=PGSC0003DMT400026193 locus=PGSC0003DMG400010093 ID=PGSC0003DMT400026193.v4.03 annot-version=v4.03
Sequence

MASPDSPPSFFPFPTFPTATPSNSTSDSPPAPPPDSSSPPPPPPDSSAPPPSPPAPDSPP
PSESKSPPPAESPPPPPPTAAAPPPSAPPPKPSVSPPPPSPKAPPPANSPPPASSPPPPS
KDSPPPAPPPSPPPPPPAVSPSPPPPVKNQPPPPDSPPPAPVANPPQNSPPPPALAPPPA
SLPSAPPPNLLTSPPPSISPPAPPNNTSPAGAPPPLPVTRLPTEKPTAIPKPAITADSSA
RNGGGNKTGSVAAIGVVAGFLALSLVIVAVWFTRRRKKRESAFNLNYLGPSPFASSPNSD
TSFLRSRSQHSTYLAPTGSQSNFMYSPDHGGIGNSRSWFTYEELSEATNGFSPDSVLGEG
GFGCVYKGVLNDGREVAVKQLKSGSGQGEREFRAEVEIISRVHHRHLVSLVGYCISEQQR
LLVYDYVPNDTLDYHLHGKGMQTMDWATRVKVAAGAARGLAYLHEDCHPRIIHRDIKTSN
ILLDINFEAQVADFGLARLAGDASSTHVTTRVMGTFGYLAPEYASSGKLTEKSDVYSYGV
VLLELITGRKPVDQSQPLGDESLVEWARPLLAQALETENFENVVDPRLGNNFVAGEMFRM
IEAAAACVRHSGSKRPRMSQVVRALDSMDELSDLSNGVKPGQSGIFESREQSAQIRMFQK
MAFGSQEYSSDFFNYSQGSYKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400026193
Transcript Infomation

pacid=37427426 locus=PGSC0003DMG400010093 ID=PGSC0003DMT400026193.v4.03 annot-version=v4.03
Sequence

ATGGCCTCTCCAGATTCTCCCCCATCTTTTTTTCCATTCCCAACTTTCCCCACAGCTACA
CCTTCAAATTCTACTTCTGATTCACCTCCTGCTCCTCCTCCTGACTCTTCATCTCCTCCT
CCTCCACCACCTGACTCTTCAGCTCCACCTCCTTCTCCACCAGCTCCAGATTCTCCTCCT
CCGTCAGAATCAAAATCACCTCCACCGGCAGAATCTCCTCCACCTCCACCTCCTACAGCA
GCGGCGCCACCACCTTCGGCGCCTCCTCCAAAGCCGTCAGTGTCACCACCACCACCTTCT
CCTAAGGCTCCTCCACCAGCTAATTCTCCCCCTCCAGCTTCATCTCCACCCCCACCATCA
AAAGATTCTCCTCCTCCTGCTCCTCCTCCTTCCCCACCTCCTCCCCCTCCAGCAGTTTCA
CCTTCTCCTCCACCACCAGTGAAAAATCAACCACCACCACCTGATTCTCCACCTCCTGCA
CCTGTTGCAAATCCGCCACAAAACTCCCCTCCACCTCCTGCATTGGCTCCCCCTCCAGCC
TCACTGCCATCTGCCCCTCCACCTAACCTCTTAACATCTCCACCCCCTTCTATTTCACCT
CCTGCTCCCCCAAATAATACTTCTCCAGCTGGAGCTCCCCCTCCATTACCTGTGACTCGC
CTTCCTACAGAGAAGCCCACTGCTATCCCTAAACCTGCTATCACTGCAGATTCAAGTGCC
AGAAATGGTGGGGGAAATAAGACAGGAAGTGTGGCGGCAATTGGTGTTGTTGCTGGGTTT
TTGGCCCTTAGCTTGGTCATTGTTGCTGTCTGGTTTACACGCAGGCGAAAGAAAAGAGAG
AGTGCATTTAATCTCAATTACCTGGGACCCTCTCCATTTGCTTCCTCACCAAATTCAGAT
ACATCATTCCTGAGATCAAGGTCTCAACATTCCACTTATCTAGCTCCAACCGGCTCACAA
AGCAATTTTATGTACTCTCCAGACCATGGAGGTATTGGAAATTCAAGATCATGGTTCACT
TACGAAGAATTATCTGAGGCAACAAATGGTTTTTCTCCTGATAGTGTTTTGGGTGAAGGA
GGGTTTGGATGTGTTTACAAAGGTGTTCTTAATGACGGAAGAGAAGTCGCTGTCAAACAG
CTGAAAAGTGGAAGTGGACAAGGGGAGCGGGAATTCAGAGCAGAAGTTGAGATTATCAGC
CGTGTGCACCATCGCCATTTGGTTTCACTTGTTGGTTACTGTATCTCAGAGCAGCAAAGG
TTACTTGTCTACGACTATGTGCCAAATGACACGCTTGACTATCACCTTCATGGTAAAGGC
ATGCAAACTATGGATTGGGCTACCCGAGTAAAAGTAGCTGCTGGTGCAGCACGTGGACTT
GCTTATCTTCATGAAGACTGTCATCCCCGCATTATCCATAGGGATATCAAAACATCAAAC
ATTCTCTTGGATATCAATTTTGAGGCACAGGTTGCTGATTTTGGCCTTGCAAGGTTAGCA
GGTGATGCCAGTAGTACACACGTGACAACTCGTGTGATGGGAACCTTTGGATACTTGGCA
CCAGAGTATGCATCTAGTGGAAAATTAACAGAGAAGTCTGATGTTTATTCATATGGCGTT
GTGCTTTTGGAGCTTATTACGGGACGGAAACCTGTTGACCAGTCTCAACCCTTAGGTGAT
GAAAGCCTGGTTGAATGGGCTCGACCTTTGCTTGCTCAAGCACTTGAGACTGAAAATTTT
GAAAATGTAGTAGATCCTAGGCTTGGAAACAACTTTGTTGCGGGTGAGATGTTCCGGATG
ATTGAAGCAGCTGCAGCTTGCGTTCGTCATTCAGGCTCTAAGAGGCCACGGATGAGTCAG
GTGGTTAGAGCTCTAGATTCCATGGATGAGCTGTCGGATCTGTCCAATGGAGTGAAACCT
GGACAAAGTGGAATTTTTGAGTCAAGGGAACAATCTGCACAGATAAGAATGTTTCAAAAG
ATGGCATTTGGAAGTCAAGAGTACAGTTCAGATTTCTTCAATTACTCCCAAGGCAGCTAT
AAAAGTTGA