Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026173
CDS Infomation

pacid=37426479 polypeptide=PGSC0003DMP400017879 locus=PGSC0003DMG400010086 ID=PGSC0003DMT400026173.v4.03 annot-version=v4.03
Sequence

ATGGGAATAGCAACACAACCAATTACATCTCGTCCTTGTCACAAATATCCAGTAATTCAT
CAAGTCGCAGAAAATCTCAATTCTATGTCCCAAGATTATCATCACCACAGTCTCTTCAGT
TTCCCTAATGGGTTCGAGAGATCACAAGCCGAACAACAGCACCAGCAACAACAGCAGCAG
CACCAGCAACACATGGCTGCTCAACAGATCCGCCGAGATAAATTGCGGGTGCAAGGATTC
GAACCGTTTGAAGAAGAAACAAGTACAGTTTATGAGACAGCTGGAATGTTATCTGAGATG
TTTAATTTCCCTCCTGGAACCACCGCAACCAACGCAGCAGAATTATTAGAAACTCAATTC
AATCCGAATTTTAGACAGCCAAATCCACGGCCGCAGCAGATTCATGCTGCGGCCATGGGG
AACGAGTGGTTCGGGAACCACCGACAAGGTATGGTAGTGGGTGGAGGTGCAAGTAGTCAA
CAATTGGGATATGCAAAAAATCATACTCCTAATGCGGCGGAGTCCATGCAACTTTTTCTA
ATGAATCCACAACCAAGGTCACCTTCTCCGTCTCCTCCTAATTCAACTTCTTCCACGCTT
CACATGTTGTTACCGAACCCGTCATCTACTTCAACACTTCAAGGGTTTCCTAATCCGGCC
GAAGGATCTTTCGGTCAATTCATGACATGGGGGAATGGAGGAGCAAGTGCTGCCACAGCC
ACCCATCATCTCAATGCCCAGAATGAAATCGGAGGAGTAAACGTTGTAGAAAGTCAAGGA
CTATCTCTATCCTTGTCTTCTTCGTTACAGCACAAGGCGGAGGAATTACAAATGAGCGGA
GAAGCTGGAGGAATGTTGTTCTTCAATCAAGGTGGGTCTAGTACTTCCGGGCAGTATCGA
TACAAGAATTTGAATATGGGTGGATCAGGAGTAAGCCCAAACATTCATCAAGTCCATGTT
GGGTATGGGTCATCATTAGGAGTGGTCAATGTGTTGAGGAATTCCAAATACGCGAAAGCT
GCCCAGGAACTACTGGAAGAATTCTGCAGTGTTGGAAGAGGTAAATTGAAGAAGAATAAC
AACAAAGCAGCAGCCAATAACCCTAATACGAACCCTAGTGGCGCTAACAATGAAGCTTCT
TCAAAAGATGTTCCTACTTTGTCCGCTGCTGATAGAATTGAGCATCAGAGAAGGAAGGTC
AAACTTTTATCTATGCTTGATGAGGTAGATAGGAGGTACAATCATTACTGTGAACAAATG
CAGATGGTTGTAAATTCGTTTGATTTAGTGATGGGTTTCGGCGCAGCAGTTCCCTACACA
GCACTAGCACAGAAGGCAATGTCGAGACATTTCAGGTGTTTAAAGGATGCAATAGGAGCA
CAATTGAAGCAGTGTTGTGAGTTATTAGGAGAGAAAGATGCAGGAACTTCGGGATTGACT
AAAGGAGAAACTCCGAGGCTTAAGATGCTTGAACAAAGTTTGAGGCAACAAAGGGCGTTT
CACCAAATGGGAATGATGGAACAAGAAGCTTGGAGACCACAAAGAGGCTTACCTGAACGT
TCTGTCAACATTTTAAGAGCTTGGCTTTTTGAGCATTTTCTACACCCGTATCCAAGTGAT
GCTGATAAACATCTGTTGGCAAGACAGACTGGTCTCTCCAGAAATCAGGTATCAAATTGG
TTCATTAATGCTAGGGTTCGGTTGTGGAAACCCATGGTAGAAGATATGTATCAACAAGAA
GCCAAAGATGGAGATGGAGATGGAGATGAGAAGAGCCAAAGCCAAAATAGTGGCAATAAT
ATAATTGCACAAACACCAACGCCTAATAGCCTGACTAACTCTTCATCTACTAATATGACG
ACGACAACAACAACAGCCCCTACAACTACGACAGCACTAGCTGCTGCAGAGACAGGAACA
GCTGCCACTCCCATAACTGTTACCTCAAGCAAAAGATCCCAAATCAATGCCACTGATAGT
GACCCTTCACTTGTAGCAATCAATTCCTTCTCGGAAAACCAAGCTACTTTTCCGACCAAC
ATTCATGATCCCGACGCTTGCCGTCGCGGCAACTTCTCCGGTGACGACGGGACCACCACA
CATGATCATATGGGGTCCACCATGATAAGGTTTGGGACCACTGCTGGTGACGTGTCACTC
ACCTTAGGGTTACGACATGCAGGAAATTTACCAGAGAATACTCATTTCTTTGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017879
PEP Infomation

pacid=37426479 transcript=PGSC0003DMT400026173 locus=PGSC0003DMG400010086 ID=PGSC0003DMT400026173.v4.03 annot-version=v4.03
Sequence

MGIATQPITSRPCHKYPVIHQVAENLNSMSQDYHHHSLFSFPNGFERSQAEQQHQQQQQQ
HQQHMAAQQIRRDKLRVQGFEPFEEETSTVYETAGMLSEMFNFPPGTTATNAAELLETQF
NPNFRQPNPRPQQIHAAAMGNEWFGNHRQGMVVGGGASSQQLGYAKNHTPNAAESMQLFL
MNPQPRSPSPSPPNSTSSTLHMLLPNPSSTSTLQGFPNPAEGSFGQFMTWGNGGASAATA
THHLNAQNEIGGVNVVESQGLSLSLSSSLQHKAEELQMSGEAGGMLFFNQGGSSTSGQYR
YKNLNMGGSGVSPNIHQVHVGYGSSLGVVNVLRNSKYAKAAQELLEEFCSVGRGKLKKNN
NKAAANNPNTNPSGANNEASSKDVPTLSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQM
QMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAIGAQLKQCCELLGEKDAGTSGLT
KGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSD
ADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQEAKDGDGDGDEKSQSQNSGNN
IIAQTPTPNSLTNSSSTNMTTTTTTAPTTTTALAAAETGTAATPITVTSSKRSQINATDS
DPSLVAINSFSENQATFPTNIHDPDACRRGNFSGDDGTTTHDHMGSTMIRFGTTAGDVSL
TLGLRHAGNLPENTHFFG*

Transcript Sequence

Transcript ID

PGSC0003DMT400026173
Transcript Infomation

pacid=37426479 locus=PGSC0003DMG400010086 ID=PGSC0003DMT400026173.v4.03 annot-version=v4.03
Sequence

ATGGGAATAGCAACACAACCAATTACATCTCGTCCTTGTCACAAATATCCAGTAATTCAT
CAAGTCGCAGAAAATCTCAATTCTATGTCCCAAGATTATCATCACCACAGTCTCTTCAGT
TTCCCTAATGGGTTCGAGAGATCACAAGCCGAACAACAGCACCAGCAACAACAGCAGCAG
CACCAGCAACACATGGCTGCTCAACAGATCCGCCGAGATAAATTGCGGGTGCAAGGATTC
GAACCGTTTGAAGAAGAAACAAGTACAGTTTATGAGACAGCTGGAATGTTATCTGAGATG
TTTAATTTCCCTCCTGGAACCACCGCAACCAACGCAGCAGAATTATTAGAAACTCAATTC
AATCCGAATTTTAGACAGCCAAATCCACGGCCGCAGCAGATTCATGCTGCGGCCATGGGG
AACGAGTGGTTCGGGAACCACCGACAAGGTATGGTAGTGGGTGGAGGTGCAAGTAGTCAA
CAATTGGGATATGCAAAAAATCATACTCCTAATGCGGCGGAGTCCATGCAACTTTTTCTA
ATGAATCCACAACCAAGGTCACCTTCTCCGTCTCCTCCTAATTCAACTTCTTCCACGCTT
CACATGTTGTTACCGAACCCGTCATCTACTTCAACACTTCAAGGGTTTCCTAATCCGGCC
GAAGGATCTTTCGGTCAATTCATGACATGGGGGAATGGAGGAGCAAGTGCTGCCACAGCC
ACCCATCATCTCAATGCCCAGAATGAAATCGGAGGAGTAAACGTTGTAGAAAGTCAAGGA
CTATCTCTATCCTTGTCTTCTTCGTTACAGCACAAGGCGGAGGAATTACAAATGAGCGGA
GAAGCTGGAGGAATGTTGTTCTTCAATCAAGGTGGGTCTAGTACTTCCGGGCAGTATCGA
TACAAGAATTTGAATATGGGTGGATCAGGAGTAAGCCCAAACATTCATCAAGTCCATGTT
GGGTATGGGTCATCATTAGGAGTGGTCAATGTGTTGAGGAATTCCAAATACGCGAAAGCT
GCCCAGGAACTACTGGAAGAATTCTGCAGTGTTGGAAGAGGTAAATTGAAGAAGAATAAC
AACAAAGCAGCAGCCAATAACCCTAATACGAACCCTAGTGGCGCTAACAATGAAGCTTCT
TCAAAAGATGTTCCTACTTTGTCCGCTGCTGATAGAATTGAGCATCAGAGAAGGAAGGTC
AAACTTTTATCTATGCTTGATGAGGTAGATAGGAGGTACAATCATTACTGTGAACAAATG
CAGATGGTTGTAAATTCGTTTGATTTAGTGATGGGTTTCGGCGCAGCAGTTCCCTACACA
GCACTAGCACAGAAGGCAATGTCGAGACATTTCAGGTGTTTAAAGGATGCAATAGGAGCA
CAATTGAAGCAGTGTTGTGAGTTATTAGGAGAGAAAGATGCAGGAACTTCGGGATTGACT
AAAGGAGAAACTCCGAGGCTTAAGATGCTTGAACAAAGTTTGAGGCAACAAAGGGCGTTT
CACCAAATGGGAATGATGGAACAAGAAGCTTGGAGACCACAAAGAGGCTTACCTGAACGT
TCTGTCAACATTTTAAGAGCTTGGCTTTTTGAGCATTTTCTACACCCGTATCCAAGTGAT
GCTGATAAACATCTGTTGGCAAGACAGACTGGTCTCTCCAGAAATCAGGTATCAAATTGG
TTCATTAATGCTAGGGTTCGGTTGTGGAAACCCATGGTAGAAGATATGTATCAACAAGAA
GCCAAAGATGGAGATGGAGATGGAGATGAGAAGAGCCAAAGCCAAAATAGTGGCAATAAT
ATAATTGCACAAACACCAACGCCTAATAGCCTGACTAACTCTTCATCTACTAATATGACG
ACGACAACAACAACAGCCCCTACAACTACGACAGCACTAGCTGCTGCAGAGACAGGAACA
GCTGCCACTCCCATAACTGTTACCTCAAGCAAAAGATCCCAAATCAATGCCACTGATAGT
GACCCTTCACTTGTAGCAATCAATTCCTTCTCGGAAAACCAAGCTACTTTTCCGACCAAC
ATTCATGATCCCGACGCTTGCCGTCGCGGCAACTTCTCCGGTGACGACGGGACCACCACA
CATGATCATATGGGGTCCACCATGATAAGGTTTGGGACCACTGCTGGTGACGTGTCACTC
ACCTTAGGGTTACGACATGCAGGAAATTTACCAGAGAATACTCATTTCTTTGGTTAA