Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026168
CDS Infomation

pacid=37428637 polypeptide=PGSC0003DMP400017875 locus=PGSC0003DMG400010084 ID=PGSC0003DMT400026168.v4.03 annot-version=v4.03
Sequence

ATGGATTTTGAAGGGTTTAACACCAGTAAATTTCCTGGAAATAGAGTGACATCTTCTAAA
CACACTCGTTCCAAGAGCTTCCCAGTTAAACCAGAACAAGAGGAGAATATCGTGGATCAT
TCTGTAGAGACCTCTAATCGATTGAAGTTGGATACGAGTCACGGGAATGACTGTAATGTG
AGCGAGAAGAAACAATCATCATCGGCTGAAATACAAAGTTCTCTGAGGCAGGAGATAATG
CAGCTGGAGAGAAGATTACATGATCAAGTTGCAGTTCGATGTGCTCTTGAGAAAGCATTA
GGTTATAAATCTTCTTCTCAAGATGTCAATGAAGTGACCGCAATGCCTAAGCCAGCTACA
GAACTGATAAGAGATATTGCAGTACTAGAATTGGAAGTTGGGCATTTGGAACAGTATCTT
CTCTCACTATACAGAAAAGCATTTGATCAACAAATCTCATCCTTGTCTCCTCCCACAAAA
GACGATAAATTAAAATCTCCTATAAGTACCCCAAGAAGGCGTCTAGATTTCTCCAATTCT
GATGTGATATTGAAAAGGGAAAAATCTGCTTCTCGAGTTGATAGTCGATCAGAATTATAT
CCACGGAAAGAAACCAATAGTATGGTGGAAGACAAAATTAACGAATCTGGAGTTCAACGA
AGCCATTCGTCGTTATCTCAGCGTTCAGCTCTGTCGAGCAGAGCTTCCCCACCGGAAGAG
ACACTGGGCAAAACATTGCGTGCCTGTCATTCTCAACCGTTATCTATGATGGAGTATGCG
CAAAATGCTTCTTCAAATGTAATCAGTTTGGCGGAGCATCTAGGCACCCGTATCTCTGAT
CATGTTCCTGATACACCAAACAAGCTGTCTGAGGATATGATAAAGTGCATGTGCACCATA
TATAGCAAGCTTGCTGATCCTCCACTGACAAATCCCGGTCTTTCATCGCCAACCTCATCC
TTGTCTTCCATAAGTGCATTTTCCCCAAAAGACATATGGAGTCCAGGATTTAGGAATGAT
TCATCTTTTGATGTTCGGCTGGACAATCCTTTTCATGTAGAAGGGTTGAAGGAGTTCAGT
GGACCTTACAGCACAATGATTGAAGTACAGTGTGTATATAGAGATACTCAGAAATTGGGC
GATATTGAACCGATGTTACAGCACTTCAGGTCACTTATTTCTCGCCTAGAACAAATAGAT
CCACGAAAGTTGACTCACGAAGAGAAGATAGCATTCTGGCTTAACGTACATAATGCATTG
GTGATGCATGCATTTCTAGCTTACGGTATCCCCCAAAACAATGTCAAGAGAATATTTCTA
CTCTTGAAGGCTGCCTATAATGTTGGAGGCCATGTAGTAAGTGCAGATATGATACAGAAC
TCTATCCTGGGATGTCGAATGTCCAGACCAGGACAGTGGCTTCGCTTGTTACTTTCTTCT
AAAGGAAAATTCAAGACGGGGGATGAAAGACAAACATATGCTATTGAACATCCAGAACCC
CTTCTGCATTTTGCACTCAGCTCAGGCAACCACTCAGATCCCACGGTTCGAGTCTATACA
CCGAAAAGAGTACATGAGGAGCTGGAAGTCGCAAAAGAAGATTATATCAGGGCTACCTTT
GGTGTGAAGAAGGATCAGAAAATAGTGTTGCCAAAAGTTGTGGAGTCCTTTGCTAAGGAT
TCTGGCCTATGTCCTGCTGGTGTGTTGGAGATGGTCCAGCAATCTTTACCGGAATCTCTT
AGAAAGAGCATTAAGAAAATTCCACAGGGAAAGGGCCGCAAGAACATTGAATGGGTTCCT
CATAATTTTGCTTTCCGGTATCTAATAATGAAGGACCTGGTGAAAGGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400017875
PEP Infomation

pacid=37428637 transcript=PGSC0003DMT400026168 locus=PGSC0003DMG400010084 ID=PGSC0003DMT400026168.v4.03 annot-version=v4.03
Sequence

MDFEGFNTSKFPGNRVTSSKHTRSKSFPVKPEQEENIVDHSVETSNRLKLDTSHGNDCNV
SEKKQSSSAEIQSSLRQEIMQLERRLHDQVAVRCALEKALGYKSSSQDVNEVTAMPKPAT
ELIRDIAVLELEVGHLEQYLLSLYRKAFDQQISSLSPPTKDDKLKSPISTPRRRLDFSNS
DVILKREKSASRVDSRSELYPRKETNSMVEDKINESGVQRSHSSLSQRSALSSRASPPEE
TLGKTLRACHSQPLSMMEYAQNASSNVISLAEHLGTRISDHVPDTPNKLSEDMIKCMCTI
YSKLADPPLTNPGLSSPTSSLSSISAFSPKDIWSPGFRNDSSFDVRLDNPFHVEGLKEFS
GPYSTMIEVQCVYRDTQKLGDIEPMLQHFRSLISRLEQIDPRKLTHEEKIAFWLNVHNAL
VMHAFLAYGIPQNNVKRIFLLLKAAYNVGGHVVSADMIQNSILGCRMSRPGQWLRLLLSS
KGKFKTGDERQTYAIEHPEPLLHFALSSGNHSDPTVRVYTPKRVHEELEVAKEDYIRATF
GVKKDQKIVLPKVVESFAKDSGLCPAGVLEMVQQSLPESLRKSIKKIPQGKGRKNIEWVP
HNFAFRYLIMKDLVKG*

Transcript Sequence

Transcript ID

PGSC0003DMT400026168
Transcript Infomation

pacid=37428637 locus=PGSC0003DMG400010084 ID=PGSC0003DMT400026168.v4.03 annot-version=v4.03
Sequence

ATGGATTTTGAAGGGTTTAACACCAGTAAATTTCCTGGAAATAGAGTGACATCTTCTAAA
CACACTCGTTCCAAGAGCTTCCCAGTTAAACCAGAACAAGAGGAGAATATCGTGGATCAT
TCTGTAGAGACCTCTAATCGATTGAAGTTGGATACGAGTCACGGGAATGACTGTAATGTG
AGCGAGAAGAAACAATCATCATCGGCTGAAATACAAAGTTCTCTGAGGCAGGAGATAATG
CAGCTGGAGAGAAGATTACATGATCAAGTTGCAGTTCGATGTGCTCTTGAGAAAGCATTA
GGTTATAAATCTTCTTCTCAAGATGTCAATGAAGTGACCGCAATGCCTAAGCCAGCTACA
GAACTGATAAGAGATATTGCAGTACTAGAATTGGAAGTTGGGCATTTGGAACAGTATCTT
CTCTCACTATACAGAAAAGCATTTGATCAACAAATCTCATCCTTGTCTCCTCCCACAAAA
GACGATAAATTAAAATCTCCTATAAGTACCCCAAGAAGGCGTCTAGATTTCTCCAATTCT
GATGTGATATTGAAAAGGGAAAAATCTGCTTCTCGAGTTGATAGTCGATCAGAATTATAT
CCACGGAAAGAAACCAATAGTATGGTGGAAGACAAAATTAACGAATCTGGAGTTCAACGA
AGCCATTCGTCGTTATCTCAGCGTTCAGCTCTGTCGAGCAGAGCTTCCCCACCGGAAGAG
ACACTGGGCAAAACATTGCGTGCCTGTCATTCTCAACCGTTATCTATGATGGAGTATGCG
CAAAATGCTTCTTCAAATGTAATCAGTTTGGCGGAGCATCTAGGCACCCGTATCTCTGAT
CATGTTCCTGATACACCAAACAAGCTGTCTGAGGATATGATAAAGTGCATGTGCACCATA
TATAGCAAGCTTGCTGATCCTCCACTGACAAATCCCGGTCTTTCATCGCCAACCTCATCC
TTGTCTTCCATAAGTGCATTTTCCCCAAAAGACATATGGAGTCCAGGATTTAGGAATGAT
TCATCTTTTGATGTTCGGCTGGACAATCCTTTTCATGTAGAAGGGTTGAAGGAGTTCAGT
GGACCTTACAGCACAATGATTGAAGTACAGTGTGTATATAGAGATACTCAGAAATTGGGC
GATATTGAACCGATGTTACAGCACTTCAGGTCACTTATTTCTCGCCTAGAACAAATAGAT
CCACGAAAGTTGACTCACGAAGAGAAGATAGCATTCTGGCTTAACGTACATAATGCATTG
GTGATGCATGCATTTCTAGCTTACGGTATCCCCCAAAACAATGTCAAGAGAATATTTCTA
CTCTTGAAGGCTGCCTATAATGTTGGAGGCCATGTAGTAAGTGCAGATATGATACAGAAC
TCTATCCTGGGATGTCGAATGTCCAGACCAGGACAGTGGCTTCGCTTGTTACTTTCTTCT
AAAGGAAAATTCAAGACGGGGGATGAAAGACAAACATATGCTATTGAACATCCAGAACCC
CTTCTGCATTTTGCACTCAGCTCAGGCAACCACTCAGATCCCACGGTTCGAGTCTATACA
CCGAAAAGAGTACATGAGGAGCTGGAAGTCGCAAAAGAAGATTATATCAGGGCTACCTTT
GGTGTGAAGAAGGATCAGAAAATAGTGTTGCCAAAAGTTGTGGAGTCCTTTGCTAAGGAT
TCTGGCCTATGTCCTGCTGGTGTGTTGGAGATGGTCCAGCAATCTTTACCGGAATCTCTT
AGAAAGAGCATTAAGAAAATTCCACAGGGAAAGGGCCGCAAGAACATTGAATGGGTTCCT
CATAATTTTGCTTTCCGGTATCTAATAATGAAGGACCTGGTGAAAGGATGA