Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026141
CDS Infomation

pacid=37428977 polypeptide=PGSC0003DMP400017855 locus=PGSC0003DMG400010077 ID=PGSC0003DMT400026141.v4.03 annot-version=v4.03
Sequence

ATGCGCCACCTCTTGAGCTCTTTCCGCCACAATCAGCTAAATCACCGCCGTATAACGCCG
CGTATCCATTCCATCTTCTGTGCAAATTACAAGCCGCAGAAGCCTCAACCACTGCCAGCA
CCACCGTCTCCTCCAAAACCTCCTAAAAAGCCGGTGACTTTCACCCATCACGGCGAGTCA
TGGGAGGACCCTTACAGCTGGATGTCACAGCTCAATGACAAAGTAGCCATGCGCCATATG
GATGTGTACATGGAACAAGAGGAGAAATACATTGAAGCCGTTATGTCCGATACCGAACGC
CTCCAGTCCAAACTTCAGTCGGAAATGGGCTCTCGCTTGTCAAATGAACTCTCCACACCT
CCCCTTCGTTGGGGTCCTTGGTTGTACTATAGGCGAGTGGAAGAAGGGAAGCAGTATCCA
GTGCTGTGTAGAAGGTTAGCACGGGCGAATGAAGATTTCATTTCCAATAAATCTCCTTCA
GCAGGTTTCGATTTTACTTCGGGGAAGAGAATTGAGCAGAAGCTTCTTGACTACAATGAA
GAAGCTGAAAGATTTGGAGGTTATGCATATGAAGAATTATCAGAAGTGTCCCCTGATCAC
CGATATCTAGCATACACAATGTATGATAAGGATAACGATTGCTTTAAATTGTCTGTGCGA
GACTTAAATTTCGGTTCACTATGTAGTAAGCCCCAAGCAGATCGGGTTTCAAACATAGCT
TGGGGGAAAGATGGACAAGCATTACTCTATGTTGTCACTGATCACTGTAAGAGGCCTTAT
AGAATCTACTGTAGTATGATTGGGTCTGAACAAGATGACGTGTTGCTTATAGAAGAGCCT
AGCGAGAATGGCTATGTAAACATAAGACATACTAAGGATTTCCAGTTTCTAACAGTACAT
ATATTCTCAACTACATCATCTAAGATTTTTCTGATAGATGCTGCTGATCCTTTGTCTGGT
ATGATACCTGTGTGGGAATGTGAGGCTCAAGCCCACTGTGTTGTCGAGCATCACCAAGGG
TATCTTTACCTATTTACTGATGCGGCTAAAAATGGACAATTAGTTGATCACCATTATCTT
TTACGTAGTCCAGTTAACTGCTCACTGAACAAAAGGAAGTGGGAGAATATATTCAGTGAT
GACTCGGAGTTCATAATTGAAGACGTTGATTTCAGTGACAAGCACTTGGTGCTCATTATG
CGGGACAAACGAAATTTTAGACTTTGTCCCATTTCTCTTCCTCTGCCAATTATGAAGGAA
GAGATTAAGCTCAAAGAGATCAGTCCACAGTCTTTGCCTCTTCCAAAGAATGTCTCTCAA
ATTAAGCCTGGAACTAATTATGACTTCTACTCCTCAACAATGCGATTCACAATATCATCC
CCTTTGATGCCTGATGCAGTTGTCGATTATGACTTATCAAATGGAAAATGGAACATAGTA
CAGCAGCAAAACTTGCTTCATGAAAGAACAAAAGTGTTGTACGGAACATCATCTTCAGCT
AGTTTTATTCAGAGTGCGAGGAATTCAGGCTCTAATAACGAAGTCAATCCTGAAAATCAT
TCTACATGGAATGATCTTTCTGAGTTCTATGCCTGTGAAGTTCACAATGTCATGTCTTAT
GATGGGATTATTGTTCCTTTGACTGTTGTCTATTCTCCAAAGAGGAAAAAGCAAGCTGAG
AATCCTGGATTACTTCATGGACATGGAGCTTATGGAGAGATACTGGACAAACGATGGCGC
AGTGAGTTAAAAAGCCTTCTCGATCGTGGTTGGGTAATTGCATATGCTGATGTCAGAGGT
GGAGGAGGTGGGGGGAAAAAGTGGCACCATGATGGCAGGCGGACAAAGAAGATCAATTCC
ATTTATGATTACATATCCTGTGCTAAATTCCTAATTGAGAGGGAAATTGTGCAAGATAAC
AAGCTCGCTGGGTGGGGTTACAGTGCTGGGGGGCTATTGGTGGCTTCAGCTATAAATTCT
TGCCCAAGTCTATTGCGGGCAGCAGTTTTGGAGGTACCATTTTTGGATCCAACAAACACT
CTCCTCAATCCAATCTTACCGCTTACACCTGCTGACTATGATGAGTTTGGGTACCCCGGG
GACATTACTGACTTTCAGGCAATCCGCAAATATTCACCTTACAATAACATTCAAAAAGAT
ATTTTATATCCAGCTATTCTGGTGACATCTTCATTCAACACACGGTTTGGAGTGTGGGAA
GCTGCAAAATATGTTGCTCGGGTGCGTGAATGTTCCATCTATGATCCTAAACATCCAGTA
TTACTTAATTTGACAGCTGATATAGTTGAAGAAAATCGATACCTGCACTGCAAGGAGTCA
GCGCTGGAGACAGCTTTCCTTATTAAGATGATGGAATCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400017855
PEP Infomation

pacid=37428977 transcript=PGSC0003DMT400026141 locus=PGSC0003DMG400010077 ID=PGSC0003DMT400026141.v4.03 annot-version=v4.03
Sequence

MRHLLSSFRHNQLNHRRITPRIHSIFCANYKPQKPQPLPAPPSPPKPPKKPVTFTHHGES
WEDPYSWMSQLNDKVAMRHMDVYMEQEEKYIEAVMSDTERLQSKLQSEMGSRLSNELSTP
PLRWGPWLYYRRVEEGKQYPVLCRRLARANEDFISNKSPSAGFDFTSGKRIEQKLLDYNE
EAERFGGYAYEELSEVSPDHRYLAYTMYDKDNDCFKLSVRDLNFGSLCSKPQADRVSNIA
WGKDGQALLYVVTDHCKRPYRIYCSMIGSEQDDVLLIEEPSENGYVNIRHTKDFQFLTVH
IFSTTSSKIFLIDAADPLSGMIPVWECEAQAHCVVEHHQGYLYLFTDAAKNGQLVDHHYL
LRSPVNCSLNKRKWENIFSDDSEFIIEDVDFSDKHLVLIMRDKRNFRLCPISLPLPIMKE
EIKLKEISPQSLPLPKNVSQIKPGTNYDFYSSTMRFTISSPLMPDAVVDYDLSNGKWNIV
QQQNLLHERTKVLYGTSSSASFIQSARNSGSNNEVNPENHSTWNDLSEFYACEVHNVMSY
DGIIVPLTVVYSPKRKKQAENPGLLHGHGAYGEILDKRWRSELKSLLDRGWVIAYADVRG
GGGGGKKWHHDGRRTKKINSIYDYISCAKFLIEREIVQDNKLAGWGYSAGGLLVASAINS
CPSLLRAAVLEVPFLDPTNTLLNPILPLTPADYDEFGYPGDITDFQAIRKYSPYNNIQKD
ILYPAILVTSSFNTRFGVWEAAKYVARVRECSIYDPKHPVLLNLTADIVEENRYLHCKES
ALETAFLIKMMES*

Transcript Sequence

Transcript ID

PGSC0003DMT400026141
Transcript Infomation

pacid=37428977 locus=PGSC0003DMG400010077 ID=PGSC0003DMT400026141.v4.03 annot-version=v4.03
Sequence

ATGCGCCACCTCTTGAGCTCTTTCCGCCACAATCAGCTAAATCACCGCCGTATAACGCCG
CGTATCCATTCCATCTTCTGTGCAAATTACAAGCCGCAGAAGCCTCAACCACTGCCAGCA
CCACCGTCTCCTCCAAAACCTCCTAAAAAGCCGGTGACTTTCACCCATCACGGCGAGTCA
TGGGAGGACCCTTACAGCTGGATGTCACAGCTCAATGACAAAGTAGCCATGCGCCATATG
GATGTGTACATGGAACAAGAGGAGAAATACATTGAAGCCGTTATGTCCGATACCGAACGC
CTCCAGTCCAAACTTCAGTCGGAAATGGGCTCTCGCTTGTCAAATGAACTCTCCACACCT
CCCCTTCGTTGGGGTCCTTGGTTGTACTATAGGCGAGTGGAAGAAGGGAAGCAGTATCCA
GTGCTGTGTAGAAGGTTAGCACGGGCGAATGAAGATTTCATTTCCAATAAATCTCCTTCA
GCAGGTTTCGATTTTACTTCGGGGAAGAGAATTGAGCAGAAGCTTCTTGACTACAATGAA
GAAGCTGAAAGATTTGGAGGTTATGCATATGAAGAATTATCAGAAGTGTCCCCTGATCAC
CGATATCTAGCATACACAATGTATGATAAGGATAACGATTGCTTTAAATTGTCTGTGCGA
GACTTAAATTTCGGTTCACTATGTAGTAAGCCCCAAGCAGATCGGGTTTCAAACATAGCT
TGGGGGAAAGATGGACAAGCATTACTCTATGTTGTCACTGATCACTGTAAGAGGCCTTAT
AGAATCTACTGTAGTATGATTGGGTCTGAACAAGATGACGTGTTGCTTATAGAAGAGCCT
AGCGAGAATGGCTATGTAAACATAAGACATACTAAGGATTTCCAGTTTCTAACAGTACAT
ATATTCTCAACTACATCATCTAAGATTTTTCTGATAGATGCTGCTGATCCTTTGTCTGGT
ATGATACCTGTGTGGGAATGTGAGGCTCAAGCCCACTGTGTTGTCGAGCATCACCAAGGG
TATCTTTACCTATTTACTGATGCGGCTAAAAATGGACAATTAGTTGATCACCATTATCTT
TTACGTAGTCCAGTTAACTGCTCACTGAACAAAAGGAAGTGGGAGAATATATTCAGTGAT
GACTCGGAGTTCATAATTGAAGACGTTGATTTCAGTGACAAGCACTTGGTGCTCATTATG
CGGGACAAACGAAATTTTAGACTTTGTCCCATTTCTCTTCCTCTGCCAATTATGAAGGAA
GAGATTAAGCTCAAAGAGATCAGTCCACAGTCTTTGCCTCTTCCAAAGAATGTCTCTCAA
ATTAAGCCTGGAACTAATTATGACTTCTACTCCTCAACAATGCGATTCACAATATCATCC
CCTTTGATGCCTGATGCAGTTGTCGATTATGACTTATCAAATGGAAAATGGAACATAGTA
CAGCAGCAAAACTTGCTTCATGAAAGAACAAAAGTGTTGTACGGAACATCATCTTCAGCT
AGTTTTATTCAGAGTGCGAGGAATTCAGGCTCTAATAACGAAGTCAATCCTGAAAATCAT
TCTACATGGAATGATCTTTCTGAGTTCTATGCCTGTGAAGTTCACAATGTCATGTCTTAT
GATGGGATTATTGTTCCTTTGACTGTTGTCTATTCTCCAAAGAGGAAAAAGCAAGCTGAG
AATCCTGGATTACTTCATGGACATGGAGCTTATGGAGAGATACTGGACAAACGATGGCGC
AGTGAGTTAAAAAGCCTTCTCGATCGTGGTTGGGTAATTGCATATGCTGATGTCAGAGGT
GGAGGAGGTGGGGGGAAAAAGTGGCACCATGATGGCAGGCGGACAAAGAAGATCAATTCC
ATTTATGATTACATATCCTGTGCTAAATTCCTAATTGAGAGGGAAATTGTGCAAGATAAC
AAGCTCGCTGGGTGGGGTTACAGTGCTGGGGGGCTATTGGTGGCTTCAGCTATAAATTCT
TGCCCAAGTCTATTGCGGGCAGCAGTTTTGGAGGTACCATTTTTGGATCCAACAAACACT
CTCCTCAATCCAATCTTACCGCTTACACCTGCTGACTATGATGAGTTTGGGTACCCCGGG
GACATTACTGACTTTCAGGCAATCCGCAAATATTCACCTTACAATAACATTCAAAAAGAT
ATTTTATATCCAGCTATTCTGGTGACATCTTCATTCAACACACGGTTTGGAGTGTGGGAA
GCTGCAAAATATGTTGCTCGGGTGCGTGAATGTTCCATCTATGATCCTAAACATCCAGTA
TTACTTAATTTGACAGCTGATATAGTTGAAGAAAATCGATACCTGCACTGCAAGGAGTCA
GCGCTGGAGACAGCTTTCCTTATTAAGATGATGGAATCATAG