Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026121
CDS Infomation

pacid=37427860 polypeptide=PGSC0003DMP400017841 locus=PGSC0003DMG402010071 ID=PGSC0003DMT400026121.v4.03 annot-version=v4.03
Sequence

ATGGATTATGTTGGTGGATTGCTACTTGCCAGCACTTTGGTCCTGTGCATTGGTTGGTTT
GCAATAAGCAACAAATGTAAGAAGAAGCTTCCACCAGGACCATATCCCCTGCCCTTGATT
GGAAATCTTCACAACATACTTGGTGGTCAACCTCACCAGTCCCTTGACAAACTTGCCCAA
AAGTATGGCCCAATAATCAGCCTCAGATTGGGCCAAAAAACGACAGTGGTTATATCTTCA
TCAGCCGTTGCTAAGGAAGTTTTACAAAAGCAAGATTTGGCCTTTTCTAGCAGAACAATT
CCGGATGCAATCTATGCCCTAAATCACTACCAATTCTCTGTGGTATGGCTACCAGTCGCT
AATCGATGGAGAAGCCTTAGGAAAATCTTGAATTCCTATATCTTCTCCGGAAGCAGGCTT
GACGCCAATCAACATCTCAGGTCCGGAAAGATCCAAGATTTAATTGCTTATTGCCGTGGG
TTTAGTGAAACTGGTGAGGCAGTGAATATAGGACAAGCTGCTTTCGAGACCTCTATGAAT
TTACTTTCGAACACCATATTTTCCAAGGATGTTGTGGACCCTTATGCAAATTCAGGTAAA
GAATTCAAGGATGTGGTGTCCAACATCATGGAAGATGCTGGTAAGCCCAATTTGGCTGAT
TATTTCCCCGTGTTTAAAGCAATTGATCCTCAAGGAATAAGGCGAAGAGTAGGCAAGCAT
TTTGGTAAGTTACTTCAACAATTTGAGGGATTGATAGATGAACGATTGGAGGCAAGGAAG
AAATCAGCAACTATTGGTAGCACTGACGTTCTTGACGTTCTGTTAAATACCAGTGAAGAA
GATGCTCAGACAATCGACAGAAATCACATAGAACGGTTATGCCTGGACCTATTCACAGCG
GGAACTGATACAACTTCAAATACATTAGAATGGGCAATGGTAGAGGTCATGAGAAAACCA
TACATAATGAAAAAAGCTAAAGCTGAACTTGCTGAAGTTATTGGCCAAGGCAAGGCAATA
GAAGAAGCGGATGTTGCCCGTCTCTCATATTTGCAGTGCATAGTGAAAGAAACCTTGCGG
ATGCACCCACCAGTTCCCTTTTTGATCCGAAAGGTAGATCAAGACGTTGAGGCATGTGGC
TATTTTGTTCCGAAAGATTCTCAAGTGTTGGTGCATGTATGGTCAATAGGCCGTGATCCA
GCTATATGGGAGGATCCTCTGACATTTAAGCCAGAGAGATTTTGGAGTTCGAAAATGGAT
GTTCGTGGCCAAGATTTTGAACTCATTCCATTTGGTGCCGGTAGAAGAATTTGCCCGGGG
TTACCTTTGGCAATCCGGACACTTTCTGTGATGTTGGGTTCATTGTTGAACTCATTTGAT
TGGAAAGCTGAAGGTGATATTGCACCAGAAGATTTGGATGTAGAAGAAAAGTTTGGCATT
ACACTAGCGAGGTCGCATCCATTACGAGCTGTCCCTATTCCGCTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400017841
PEP Infomation

pacid=37427860 transcript=PGSC0003DMT400026121 locus=PGSC0003DMG402010071 ID=PGSC0003DMT400026121.v4.03 annot-version=v4.03
Sequence

MDYVGGLLLASTLVLCIGWFAISNKCKKKLPPGPYPLPLIGNLHNILGGQPHQSLDKLAQ
KYGPIISLRLGQKTTVVISSSAVAKEVLQKQDLAFSSRTIPDAIYALNHYQFSVVWLPVA
NRWRSLRKILNSYIFSGSRLDANQHLRSGKIQDLIAYCRGFSETGEAVNIGQAAFETSMN
LLSNTIFSKDVVDPYANSGKEFKDVVSNIMEDAGKPNLADYFPVFKAIDPQGIRRRVGKH
FGKLLQQFEGLIDERLEARKKSATIGSTDVLDVLLNTSEEDAQTIDRNHIERLCLDLFTA
GTDTTSNTLEWAMVEVMRKPYIMKKAKAELAEVIGQGKAIEEADVARLSYLQCIVKETLR
MHPPVPFLIRKVDQDVEACGYFVPKDSQVLVHVWSIGRDPAIWEDPLTFKPERFWSSKMD
VRGQDFELIPFGAGRRICPGLPLAIRTLSVMLGSLLNSFDWKAEGDIAPEDLDVEEKFGI
TLARSHPLRAVPIPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400026121
Transcript Infomation

pacid=37427860 locus=PGSC0003DMG402010071 ID=PGSC0003DMT400026121.v4.03 annot-version=v4.03
Sequence

ATGGATTATGTTGGTGGATTGCTACTTGCCAGCACTTTGGTCCTGTGCATTGGTTGGTTT
GCAATAAGCAACAAATGTAAGAAGAAGCTTCCACCAGGACCATATCCCCTGCCCTTGATT
GGAAATCTTCACAACATACTTGGTGGTCAACCTCACCAGTCCCTTGACAAACTTGCCCAA
AAGTATGGCCCAATAATCAGCCTCAGATTGGGCCAAAAAACGACAGTGGTTATATCTTCA
TCAGCCGTTGCTAAGGAAGTTTTACAAAAGCAAGATTTGGCCTTTTCTAGCAGAACAATT
CCGGATGCAATCTATGCCCTAAATCACTACCAATTCTCTGTGGTATGGCTACCAGTCGCT
AATCGATGGAGAAGCCTTAGGAAAATCTTGAATTCCTATATCTTCTCCGGAAGCAGGCTT
GACGCCAATCAACATCTCAGGTCCGGAAAGATCCAAGATTTAATTGCTTATTGCCGTGGG
TTTAGTGAAACTGGTGAGGCAGTGAATATAGGACAAGCTGCTTTCGAGACCTCTATGAAT
TTACTTTCGAACACCATATTTTCCAAGGATGTTGTGGACCCTTATGCAAATTCAGGTAAA
GAATTCAAGGATGTGGTGTCCAACATCATGGAAGATGCTGGTAAGCCCAATTTGGCTGAT
TATTTCCCCGTGTTTAAAGCAATTGATCCTCAAGGAATAAGGCGAAGAGTAGGCAAGCAT
TTTGGTAAGTTACTTCAACAATTTGAGGGATTGATAGATGAACGATTGGAGGCAAGGAAG
AAATCAGCAACTATTGGTAGCACTGACGTTCTTGACGTTCTGTTAAATACCAGTGAAGAA
GATGCTCAGACAATCGACAGAAATCACATAGAACGGTTATGCCTGGACCTATTCACAGCG
GGAACTGATACAACTTCAAATACATTAGAATGGGCAATGGTAGAGGTCATGAGAAAACCA
TACATAATGAAAAAAGCTAAAGCTGAACTTGCTGAAGTTATTGGCCAAGGCAAGGCAATA
GAAGAAGCGGATGTTGCCCGTCTCTCATATTTGCAGTGCATAGTGAAAGAAACCTTGCGG
ATGCACCCACCAGTTCCCTTTTTGATCCGAAAGGTAGATCAAGACGTTGAGGCATGTGGC
TATTTTGTTCCGAAAGATTCTCAAGTGTTGGTGCATGTATGGTCAATAGGCCGTGATCCA
GCTATATGGGAGGATCCTCTGACATTTAAGCCAGAGAGATTTTGGAGTTCGAAAATGGAT
GTTCGTGGCCAAGATTTTGAACTCATTCCATTTGGTGCCGGTAGAAGAATTTGCCCGGGG
TTACCTTTGGCAATCCGGACACTTTCTGTGATGTTGGGTTCATTGTTGAACTCATTTGAT
TGGAAAGCTGAAGGTGATATTGCACCAGAAGATTTGGATGTAGAAGAAAAGTTTGGCATT
ACACTAGCGAGGTCGCATCCATTACGAGCTGTCCCTATTCCGCTATAA