Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026093
CDS Infomation

pacid=37425729 polypeptide=PGSC0003DMP400017816 locus=PGSC0003DMG400010065 ID=PGSC0003DMT400026093.v4.03 annot-version=v4.03
Sequence

ATGCGTTGGTGGCAGAGCGCCTTTTCATCTTCCTCCGGTTCGTCTTCCTCTTCCACGTCA
TGCTCCTCTTCCAAAGTATACTCTGACGATAGCCTCCTTGCCTCCGGTGGAGGCATTCGT
TACACCATCAAATCGGCTTTTTTCTTCGCCCGTAGGCGTCGACACGCTCGCGCGAAAAAA
CTCCAAAATCTTACGGAAAATGACGGTGATGACTGGCGTTCTCACTGTTCCAACGAGAAT
TTTCCGTCCAAATGTTCCTCCGATCGTCCGCCTCCGCAACCTTTGCCTTTGCCGGAGCTG
CATCTTGTGCTTCGCCACGAATCCGATGCGGTTTCGAATGAACCCAATGTACCATTGCCA
TCGCCCACAGACGCGCATTTGCATCATAGAACTGGAGAGGATTCTTCCAACGTTGATACC
CGTAAGGATGGTGTAGCATCCCATGGGAGATTATCAAGCCAAGATGCTCGAAAGAAGAAA
AAAGAGCACTTGGGAAGTCGCTTGTCTAGGAAGACACCTCAAAAGCTTCATGTTGCGGAT
AGAGTTTCTGATATCAGGATCAGCGCACCCATTAGTGCTCCTACAACTCCTTATGCAAGT
CCTGGACTCAGCCCACTAAAAGCTGGGGATCTTTTAAATCATAATTACATGGCATTCCCT
GGTGCTTTTCAAGTTTGTTCTGCCCCGGAGATGCCTCCATCGGACAGACTTCAGTATCCA
GGTTTCTCTTACCATGTTCTCCCGGAGAAAAATGCTTTTAGTGTTGATAATTCTCCTCAT
CACAGTCCAAGAGTAAGCCCACAGAGGAGTAGAAAGATCGCAAGTGGACCTGCATCGCCC
TTGCATCAATTATTACCAAATGAGAACTCAACAGCACGCCGTGAGAGTAGTGCGCAGGGA
AATGTCCATCCACTACCACTTCCTCCTTTGGGTGCCACTCCTTCACACCCTACTTCCATT
CCACCAGTTCCCTCCAATGCAGAGTTGACACCAATCAAAGGCCAATGGCAAAAGGGGAAA
CTTATTGGGCGTGGGACATTTGGAAGTGTATATGTCGCATCAAACAGAGAAACTGGAGCT
TTATGTGCAATGAAAGAAGTTGAATTATTACCAGATGATCCAAAATCTGCAGAGAGCATA
AGGCAATTAGAGCAGGAAATTAATGTTCTCAGTCATCTCAAGCACCCAAATATTGTCCAG
TATTACGGCAGCGAAATAGTTGGTGACCGATTTTACATTTATCTAGAATATGTTCATCCT
GGTTCTATCAATAAATTCATCCGTGATCATTGTGAAGCAATTTCAGAATCCATAGTACGA
AATTTTACTCGCCATATTCTCTGTGGATTGGCTTACTTGCATAGCAAAAAAACCATTCAC
AGGGACATAAAAGGGGCTAATTTGCTTGTTGATGCTTATGGGGTCGTAAAGCTTGCAGAT
TTTGGGATGGCTAAGCATCTCAATGGGCAAGCTGCTAATCTCTCCTTAAAGGGAAGTCCT
TACTGGATGGCTCCTGAGCTCTTGCAGTCAGTTATGCAGACAGATACTACCACTGATCTC
GCCTTTGCCACTGACATATGGAGTTTGGGTTGTACAGTAATTGAAATGCTGAACGGCAGA
CCACCTTGGAGTGAATATGAAGCAGCTGCAGCCATGTTCAAGGTTCTAAAAGATACGCCT
CCAATACCGGAAACATTATCACCTGAAGGGAAAGATTTCTTGCGCTGTTGTTTCTGTAGG
AACCCAGCGGAGAGGCCCTCAGCCAGCATGTTATTAGAGCATCGATTTATGAGAGTCTCT
CATCAGCCAGATGTACCTTCTTTCATCAAACCAGTTGGTGTGATACGAGTCAAAGAAAAG
TTAAATTCTCAAAAAGAGCAGACAACATACAATCTTGACCAAGGGCGTTTATCGCTAGAG
AGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400017816
PEP Infomation

pacid=37425729 transcript=PGSC0003DMT400026093 locus=PGSC0003DMG400010065 ID=PGSC0003DMT400026093.v4.03 annot-version=v4.03
Sequence

MRWWQSAFSSSSGSSSSSTSCSSSKVYSDDSLLASGGGIRYTIKSAFFFARRRRHARAKK
LQNLTENDGDDWRSHCSNENFPSKCSSDRPPPQPLPLPELHLVLRHESDAVSNEPNVPLP
SPTDAHLHHRTGEDSSNVDTRKDGVASHGRLSSQDARKKKKEHLGSRLSRKTPQKLHVAD
RVSDIRISAPISAPTTPYASPGLSPLKAGDLLNHNYMAFPGAFQVCSAPEMPPSDRLQYP
GFSYHVLPEKNAFSVDNSPHHSPRVSPQRSRKIASGPASPLHQLLPNENSTARRESSAQG
NVHPLPLPPLGATPSHPTSIPPVPSNAELTPIKGQWQKGKLIGRGTFGSVYVASNRETGA
LCAMKEVELLPDDPKSAESIRQLEQEINVLSHLKHPNIVQYYGSEIVGDRFYIYLEYVHP
GSINKFIRDHCEAISESIVRNFTRHILCGLAYLHSKKTIHRDIKGANLLVDAYGVVKLAD
FGMAKHLNGQAANLSLKGSPYWMAPELLQSVMQTDTTTDLAFATDIWSLGCTVIEMLNGR
PPWSEYEAAAAMFKVLKDTPPIPETLSPEGKDFLRCCFCRNPAERPSASMLLEHRFMRVS
HQPDVPSFIKPVGVIRVKEKLNSQKEQTTYNLDQGRLSLER*

Transcript Sequence

Transcript ID

PGSC0003DMT400026093
Transcript Infomation

pacid=37425729 locus=PGSC0003DMG400010065 ID=PGSC0003DMT400026093.v4.03 annot-version=v4.03
Sequence

ATGCGTTGGTGGCAGAGCGCCTTTTCATCTTCCTCCGGTTCGTCTTCCTCTTCCACGTCA
TGCTCCTCTTCCAAAGTATACTCTGACGATAGCCTCCTTGCCTCCGGTGGAGGCATTCGT
TACACCATCAAATCGGCTTTTTTCTTCGCCCGTAGGCGTCGACACGCTCGCGCGAAAAAA
CTCCAAAATCTTACGGAAAATGACGGTGATGACTGGCGTTCTCACTGTTCCAACGAGAAT
TTTCCGTCCAAATGTTCCTCCGATCGTCCGCCTCCGCAACCTTTGCCTTTGCCGGAGCTG
CATCTTGTGCTTCGCCACGAATCCGATGCGGTTTCGAATGAACCCAATGTACCATTGCCA
TCGCCCACAGACGCGCATTTGCATCATAGAACTGGAGAGGATTCTTCCAACGTTGATACC
CGTAAGGATGGTGTAGCATCCCATGGGAGATTATCAAGCCAAGATGCTCGAAAGAAGAAA
AAAGAGCACTTGGGAAGTCGCTTGTCTAGGAAGACACCTCAAAAGCTTCATGTTGCGGAT
AGAGTTTCTGATATCAGGATCAGCGCACCCATTAGTGCTCCTACAACTCCTTATGCAAGT
CCTGGACTCAGCCCACTAAAAGCTGGGGATCTTTTAAATCATAATTACATGGCATTCCCT
GGTGCTTTTCAAGTTTGTTCTGCCCCGGAGATGCCTCCATCGGACAGACTTCAGTATCCA
GGTTTCTCTTACCATGTTCTCCCGGAGAAAAATGCTTTTAGTGTTGATAATTCTCCTCAT
CACAGTCCAAGAGTAAGCCCACAGAGGAGTAGAAAGATCGCAAGTGGACCTGCATCGCCC
TTGCATCAATTATTACCAAATGAGAACTCAACAGCACGCCGTGAGAGTAGTGCGCAGGGA
AATGTCCATCCACTACCACTTCCTCCTTTGGGTGCCACTCCTTCACACCCTACTTCCATT
CCACCAGTTCCCTCCAATGCAGAGTTGACACCAATCAAAGGCCAATGGCAAAAGGGGAAA
CTTATTGGGCGTGGGACATTTGGAAGTGTATATGTCGCATCAAACAGAGAAACTGGAGCT
TTATGTGCAATGAAAGAAGTTGAATTATTACCAGATGATCCAAAATCTGCAGAGAGCATA
AGGCAATTAGAGCAGGAAATTAATGTTCTCAGTCATCTCAAGCACCCAAATATTGTCCAG
TATTACGGCAGCGAAATAGTTGGTGACCGATTTTACATTTATCTAGAATATGTTCATCCT
GGTTCTATCAATAAATTCATCCGTGATCATTGTGAAGCAATTTCAGAATCCATAGTACGA
AATTTTACTCGCCATATTCTCTGTGGATTGGCTTACTTGCATAGCAAAAAAACCATTCAC
AGGGACATAAAAGGGGCTAATTTGCTTGTTGATGCTTATGGGGTCGTAAAGCTTGCAGAT
TTTGGGATGGCTAAGCATCTCAATGGGCAAGCTGCTAATCTCTCCTTAAAGGGAAGTCCT
TACTGGATGGCTCCTGAGCTCTTGCAGTCAGTTATGCAGACAGATACTACCACTGATCTC
GCCTTTGCCACTGACATATGGAGTTTGGGTTGTACAGTAATTGAAATGCTGAACGGCAGA
CCACCTTGGAGTGAATATGAAGCAGCTGCAGCCATGTTCAAGGTTCTAAAAGATACGCCT
CCAATACCGGAAACATTATCACCTGAAGGGAAAGATTTCTTGCGCTGTTGTTTCTGTAGG
AACCCAGCGGAGAGGCCCTCAGCCAGCATGTTATTAGAGCATCGATTTATGAGAGTCTCT
CATCAGCCAGATGTACCTTCTTTCATCAAACCAGTTGGTGTGATACGAGTCAAAGAAAAG
TTAAATTCTCAAAAAGAGCAGACAACATACAATCTTGACCAAGGGCGTTTATCGCTAGAG
AGGTAG