Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026062
CDS Infomation

pacid=37425177 polypeptide=PGSC0003DMP400017794 locus=PGSC0003DMG400010055 ID=PGSC0003DMT400026062.v4.03 annot-version=v4.03
Sequence

ATGGAAAAGAAAAGAGAGATAAAGGTTGCATTCTTGTATGTGGCTACATTCTTGGTTCTT
TGGAGTTCTGCAGCAGGATTGCTTTCTCCTAAAGGTGTCAACTTTGAAGTGCAAGCTTTA
ATGGCCATAAAAGTTGCTTTGAAGGATCCTCACGGGGTTCTTGATAATTGGGATAGTACT
TCTGTTGATCCATGTAGTTGGGCTATGGTTACTTGTTCTTCTGAGAGTTTGGTTATTGGC
TTAGGGGCACCAAGCCAGAATCTGTCTGGTACTTTTTCTCCTAGCATTGGCAATTTGACA
AATCTTCAGATTATATTGCTGCAGAATAACAATATAACAGGACCAATCCCAAAAGAAATT
GGAAGGCTCTCAAAACTTCAGACTCTTGATCTTTCTGATAACTTCTTCACTGGTGATATT
CCTGTTTCTTTGGGACACTTGAGTGACCTCAAGTACATGAGGCTCAACAATAACAGTCTA
TCAGGAGAAATTCCAGTCTCATTAGCCAACATGTCACAGCTTACTCTAGTGGACTTATCC
TTCAATCACTTGAGTGGACCGGTACCTAGGTTCCCTGCTAAGAAATTCAACATTGTTGGA
AATCCATTGATCTGTGAGACGGGGTCTGAACCAGACTGCTATGGAATGCAATTGCTGCCA
ATGTCAATGACATTGAATGGTTCAGAATGTATGCATTATAGAATGCCATTTTCCAAATCT
AACCATTTTTTCTTACCTGTAATTTTTGATTTTTCATTTCTTCTGTTTCACCTCACTTTA
TTGCTCCGTGTTTGTTATCCAGCTTCGCCTTCTGGGAAGCAAAAAGGTCATAAAATCGCG
CTTGTATTTGGCTCGACTCTTGGTTGCATTTTTTTGCTCGTTCTTGGAATTGGACTCTTT
CTATGGTCAAGGCATAGACACAATCAACAAGCCTTTTTTGATGTTAAAGATCGGCATCAT
GAAGAAGTTTCCCTTGGAAATTTAAGAAGATTTCAATTCAAGGATCTCCAAATTGCAACC
AACAACTTCAGCAACAAAAACATTTTAGGAAAAGGTGGTTTTGGTAATGTTTATAAAGGC
CATCTCCCAGACGGTACTCCTGTGGCTGTAAAGAGGCTAAATGATGGCAATGCAATTGGT
GGTGAGAAACAATTCCAAACAGAAGTCGAAATGATAAGCTTAGCAGTGCATCGTAACCTC
CTCAGGCTCTATGGATTTTGTATGACACAGTCGGAGAAGCTTTTGGTTTACCCTTTTATG
TCCAATGGTAGTGTAGCTTCGCGTCTCAGAGTAAAACCTGTGTTGGATTGGGGAACAAGG
AAGCGAATAGCTATAGGAGCTGCTCGAGGACTGTTATATCTTCACGAACAATGTGATCCA
AAGATAATTCATAGAGATGTTAAAGCAGCAAATATATTGCTCGATGACTTTTGTGAGGCG
GTTGTGGGAGATTTTGGGCTGGCAAAGCTTTTGGATCACCAGGATTCACATGTCACAACT
GCTGTGCGCGGTACAGTAGGGCATATTGCCCCTGAATACCTGTCAACAGGACAATCATCT
GAGAAAACAGATGTGTTTGGATTTGGGATCCTTCTACTTGAGCTGATCACAGGAATGAGA
GCTATAGAATTTGGAAAAGCAGCTAACCAAAAGGGAGTAATGCTTGATTGGGTTAGGAAA
ATTCATCAAGAGAAGAAACTTGATGTCCTTGTTGATAAAGATTTGAGAATCAACTATGAT
CGAATCGAGCTAGAGGAAATGGTTCAAGTTGCTCTCCTCAGCACACAATATCTTCCAGGA
CACAGACCAAAAATGTCTGAAATCGTTCGAATGCTTGAAGGTGATGGACTTGCAGAGAGA
TGGGAAGCATCCCAAAAATTTGATGGTAGTAACAAGTACAAAACTAAAGAGCTATCCTCA
TCCGAGAGATTTTCAGATCTCACCGATGATTCATTGTTACTTGTACAAGCCATGGAGTTG
TCTGGTCCTAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400017794
PEP Infomation

pacid=37425177 transcript=PGSC0003DMT400026062 locus=PGSC0003DMG400010055 ID=PGSC0003DMT400026062.v4.03 annot-version=v4.03
Sequence

MEKKREIKVAFLYVATFLVLWSSAAGLLSPKGVNFEVQALMAIKVALKDPHGVLDNWDST
SVDPCSWAMVTCSSESLVIGLGAPSQNLSGTFSPSIGNLTNLQIILLQNNNITGPIPKEI
GRLSKLQTLDLSDNFFTGDIPVSLGHLSDLKYMRLNNNSLSGEIPVSLANMSQLTLVDLS
FNHLSGPVPRFPAKKFNIVGNPLICETGSEPDCYGMQLLPMSMTLNGSECMHYRMPFSKS
NHFFLPVIFDFSFLLFHLTLLLRVCYPASPSGKQKGHKIALVFGSTLGCIFLLVLGIGLF
LWSRHRHNQQAFFDVKDRHHEEVSLGNLRRFQFKDLQIATNNFSNKNILGKGGFGNVYKG
HLPDGTPVAVKRLNDGNAIGGEKQFQTEVEMISLAVHRNLLRLYGFCMTQSEKLLVYPFM
SNGSVASRLRVKPVLDWGTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDDFCEA
VVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMR
AIEFGKAANQKGVMLDWVRKIHQEKKLDVLVDKDLRINYDRIELEEMVQVALLSTQYLPG
HRPKMSEIVRMLEGDGLAERWEASQKFDGSNKYKTKELSSSERFSDLTDDSLLLVQAMEL
SGPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400026062
Transcript Infomation

pacid=37425177 locus=PGSC0003DMG400010055 ID=PGSC0003DMT400026062.v4.03 annot-version=v4.03
Sequence

ATGGAAAAGAAAAGAGAGATAAAGGTTGCATTCTTGTATGTGGCTACATTCTTGGTTCTT
TGGAGTTCTGCAGCAGGATTGCTTTCTCCTAAAGGTGTCAACTTTGAAGTGCAAGCTTTA
ATGGCCATAAAAGTTGCTTTGAAGGATCCTCACGGGGTTCTTGATAATTGGGATAGTACT
TCTGTTGATCCATGTAGTTGGGCTATGGTTACTTGTTCTTCTGAGAGTTTGGTTATTGGC
TTAGGGGCACCAAGCCAGAATCTGTCTGGTACTTTTTCTCCTAGCATTGGCAATTTGACA
AATCTTCAGATTATATTGCTGCAGAATAACAATATAACAGGACCAATCCCAAAAGAAATT
GGAAGGCTCTCAAAACTTCAGACTCTTGATCTTTCTGATAACTTCTTCACTGGTGATATT
CCTGTTTCTTTGGGACACTTGAGTGACCTCAAGTACATGAGGCTCAACAATAACAGTCTA
TCAGGAGAAATTCCAGTCTCATTAGCCAACATGTCACAGCTTACTCTAGTGGACTTATCC
TTCAATCACTTGAGTGGACCGGTACCTAGGTTCCCTGCTAAGAAATTCAACATTGTTGGA
AATCCATTGATCTGTGAGACGGGGTCTGAACCAGACTGCTATGGAATGCAATTGCTGCCA
ATGTCAATGACATTGAATGGTTCAGAATGTATGCATTATAGAATGCCATTTTCCAAATCT
AACCATTTTTTCTTACCTGTAATTTTTGATTTTTCATTTCTTCTGTTTCACCTCACTTTA
TTGCTCCGTGTTTGTTATCCAGCTTCGCCTTCTGGGAAGCAAAAAGGTCATAAAATCGCG
CTTGTATTTGGCTCGACTCTTGGTTGCATTTTTTTGCTCGTTCTTGGAATTGGACTCTTT
CTATGGTCAAGGCATAGACACAATCAACAAGCCTTTTTTGATGTTAAAGATCGGCATCAT
GAAGAAGTTTCCCTTGGAAATTTAAGAAGATTTCAATTCAAGGATCTCCAAATTGCAACC
AACAACTTCAGCAACAAAAACATTTTAGGAAAAGGTGGTTTTGGTAATGTTTATAAAGGC
CATCTCCCAGACGGTACTCCTGTGGCTGTAAAGAGGCTAAATGATGGCAATGCAATTGGT
GGTGAGAAACAATTCCAAACAGAAGTCGAAATGATAAGCTTAGCAGTGCATCGTAACCTC
CTCAGGCTCTATGGATTTTGTATGACACAGTCGGAGAAGCTTTTGGTTTACCCTTTTATG
TCCAATGGTAGTGTAGCTTCGCGTCTCAGAGTAAAACCTGTGTTGGATTGGGGAACAAGG
AAGCGAATAGCTATAGGAGCTGCTCGAGGACTGTTATATCTTCACGAACAATGTGATCCA
AAGATAATTCATAGAGATGTTAAAGCAGCAAATATATTGCTCGATGACTTTTGTGAGGCG
GTTGTGGGAGATTTTGGGCTGGCAAAGCTTTTGGATCACCAGGATTCACATGTCACAACT
GCTGTGCGCGGTACAGTAGGGCATATTGCCCCTGAATACCTGTCAACAGGACAATCATCT
GAGAAAACAGATGTGTTTGGATTTGGGATCCTTCTACTTGAGCTGATCACAGGAATGAGA
GCTATAGAATTTGGAAAAGCAGCTAACCAAAAGGGAGTAATGCTTGATTGGGTTAGGAAA
ATTCATCAAGAGAAGAAACTTGATGTCCTTGTTGATAAAGATTTGAGAATCAACTATGAT
CGAATCGAGCTAGAGGAAATGGTTCAAGTTGCTCTCCTCAGCACACAATATCTTCCAGGA
CACAGACCAAAAATGTCTGAAATCGTTCGAATGCTTGAAGGTGATGGACTTGCAGAGAGA
TGGGAAGCATCCCAAAAATTTGATGGTAGTAACAAGTACAAAACTAAAGAGCTATCCTCA
TCCGAGAGATTTTCAGATCTCACCGATGATTCATTGTTACTTGTACAAGCCATGGAGTTG
TCTGGTCCTAGGTGA