Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026059
CDS Infomation

pacid=37428736 polypeptide=PGSC0003DMP400017791 locus=PGSC0003DMG400010054 ID=PGSC0003DMT400026059.v4.03 annot-version=v4.03
Sequence

ATGCGAAATCAACAGCGATGGCTTCTCCTTCTTCTCCGGCACCATTCTCTAGCTCAGCCT
CACATTTCCAGGCACCACATCAATCAATCTCCGTTTCAGGTAAATCGATCTGTTAGTACT
ATCGCTTCTTCAACTATCCACTCACGTACATCTCACATGCTCCCTTACCAATCACTCACC
GTTCGTAGTTTCTCCACATCTGAATTGGCTGTCGAACACAAAGATTCAGATCAAATCGCT
GTTTTAACTGGTATTTTCTCTAAACCAAACCGGAGTAATGAAGAAATTAAGCTTGATTTA
GAGTCTAATAATGTTACTGTCACGCATGATTTGGTTATAAGAGCGTTAAGGAGCTTTAAT
ACCGCCCCTGATGCGGCACATAAGTTATTTAACTGGGTTAAGGAGAATGAGAGCGAGAGG
TTGAGTTCAAAGGTGTATAATTATATGTTGGGGATATTGGGGTCTAATGGGTTTGTCAAA
GAGTTTTGGATTATGGTTGAAATCATGAAAAGTAAAGGGTATGGAGTGTCCAGGGGTACG
TTTAATCGGGCTATTGAGAAATTTGAGAAGGAGAAGCTGAGCGGCGACCTGGAGAAGCTA
AAAAAGTTGTATGGTTCTGAGCTGGCCGACAATTCGAGCGAGGAAGTTTGTTCTAGGGTT
TGCAAATTGATTCGAGGAAATGTATGGGGAGATGATGTGGAAAAGCAGCTGCGAGAGTCA
AAATTCGAGTTCTCGAGTGAATTGATCAGTATGGTTTTAGAGAAGCTTGAATGTGAAACT
AATAAGGCTTTGATATACTTTAGGTGGATTGAAGAGAGTGGTCTATTTAAACACAATGAG
CAGACATTTAATGCTATCGCAAGGGTCTTAGGTAGGGAAGAGTTCAGTGAGAAGTTCTGG
AAGTTAGTTGATGAAATGAGAACTGCAGGATTTGAAATGGAAAAAGAAACATATATTAGG
GTTCTGGATAACTTTGTTAAGAGGAAAATGATTAAGGATGCCGTGAACTTATATGAGTTT
GCAATGGTTGGCATAAACAAGCCATCCTCGGAGGACTGCACTTTTCTATTGAAGAAAATA
GTTGTTAGCAAGGAGCTTGATTTGGAATTGTTCTCAAAAGTTTTAAGGGTCTTCACAGAA
AGTGGCAATTCATTGACTAGTGCTAACCTCGATGCCATTCTCAAGTCTTTGACCAGTGTT
GATAGATTTGGCGAATGTAACAAGATATTGAAAGCAATGGAGGATGCTGGTTTCACACCT
AGTCATAATCAGCAGAGGAAAATTGCTTTTAATTTGGGTAGTGGTGGGAAGGATAAGGAA
TCCAATGAGTTTATGAATTATATAGAATCAACTGTCTCTACTCCAAATTCTAAAACATGG
ACATCTTTAATTGAAGGATACTGTGAAGCGGGTGATCTGGCTAAAGCTTCAGAAGCATTT
GAAATGATGATCGAAAAGGAAGGGTCATCCCATGCTGGGTATGCTTTAGAGCTCTTAGTG
TCCTTGCACTGCCGCAAGAGAAGAGCGATTCACGCATTCAATCTTGTTGAGAAGATGGTC
AATGAGAAAGAACTACATGTGTGGCATACCACATATAAGTTCTTGATAGGAAAATTATTG
GCCCAACGAGGTTTCGAGGAAGCTCTGGATGTTCTACATTTGATGAAAAGTCAAGATTAC
CCACCTTTTCTGAATCCCTTCATCAAGTACCTTTCAAAGACTGGAAGTGCTGATGATGCA
CTTGAATTTACTGCAGCAGTGACCCTGAAGAAACTTCCATCAACTTCTGTGTTTCTCAAT
TTGTTTGAAGCATACTTTAAAGCAGGAAGGCGAAGTGAAGCACAGGACTTCCTTGCAATA
TGTCCGAGATACATTAGGAACCATGCAGATGTTTTGAATCTTTTTTGTTCCAAGAAACCC
CAGAAAGCAACTGCCACTATTCCTGTGACTGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400017791
PEP Infomation

pacid=37428736 transcript=PGSC0003DMT400026059 locus=PGSC0003DMG400010054 ID=PGSC0003DMT400026059.v4.03 annot-version=v4.03
Sequence

MRNQQRWLLLLLRHHSLAQPHISRHHINQSPFQVNRSVSTIASSTIHSRTSHMLPYQSLT
VRSFSTSELAVEHKDSDQIAVLTGIFSKPNRSNEEIKLDLESNNVTVTHDLVIRALRSFN
TAPDAAHKLFNWVKENESERLSSKVYNYMLGILGSNGFVKEFWIMVEIMKSKGYGVSRGT
FNRAIEKFEKEKLSGDLEKLKKLYGSELADNSSEEVCSRVCKLIRGNVWGDDVEKQLRES
KFEFSSELISMVLEKLECETNKALIYFRWIEESGLFKHNEQTFNAIARVLGREEFSEKFW
KLVDEMRTAGFEMEKETYIRVLDNFVKRKMIKDAVNLYEFAMVGINKPSSEDCTFLLKKI
VVSKELDLELFSKVLRVFTESGNSLTSANLDAILKSLTSVDRFGECNKILKAMEDAGFTP
SHNQQRKIAFNLGSGGKDKESNEFMNYIESTVSTPNSKTWTSLIEGYCEAGDLAKASEAF
EMMIEKEGSSHAGYALELLVSLHCRKRRAIHAFNLVEKMVNEKELHVWHTTYKFLIGKLL
AQRGFEEALDVLHLMKSQDYPPFLNPFIKYLSKTGSADDALEFTAAVTLKKLPSTSVFLN
LFEAYFKAGRRSEAQDFLAICPRYIRNHADVLNLFCSKKPQKATATIPVTA*

Transcript Sequence

Transcript ID

PGSC0003DMT400026059
Transcript Infomation

pacid=37428736 locus=PGSC0003DMG400010054 ID=PGSC0003DMT400026059.v4.03 annot-version=v4.03
Sequence

ATGCGAAATCAACAGCGATGGCTTCTCCTTCTTCTCCGGCACCATTCTCTAGCTCAGCCT
CACATTTCCAGGCACCACATCAATCAATCTCCGTTTCAGGTAAATCGATCTGTTAGTACT
ATCGCTTCTTCAACTATCCACTCACGTACATCTCACATGCTCCCTTACCAATCACTCACC
GTTCGTAGTTTCTCCACATCTGAATTGGCTGTCGAACACAAAGATTCAGATCAAATCGCT
GTTTTAACTGGTATTTTCTCTAAACCAAACCGGAGTAATGAAGAAATTAAGCTTGATTTA
GAGTCTAATAATGTTACTGTCACGCATGATTTGGTTATAAGAGCGTTAAGGAGCTTTAAT
ACCGCCCCTGATGCGGCACATAAGTTATTTAACTGGGTTAAGGAGAATGAGAGCGAGAGG
TTGAGTTCAAAGGTGTATAATTATATGTTGGGGATATTGGGGTCTAATGGGTTTGTCAAA
GAGTTTTGGATTATGGTTGAAATCATGAAAAGTAAAGGGTATGGAGTGTCCAGGGGTACG
TTTAATCGGGCTATTGAGAAATTTGAGAAGGAGAAGCTGAGCGGCGACCTGGAGAAGCTA
AAAAAGTTGTATGGTTCTGAGCTGGCCGACAATTCGAGCGAGGAAGTTTGTTCTAGGGTT
TGCAAATTGATTCGAGGAAATGTATGGGGAGATGATGTGGAAAAGCAGCTGCGAGAGTCA
AAATTCGAGTTCTCGAGTGAATTGATCAGTATGGTTTTAGAGAAGCTTGAATGTGAAACT
AATAAGGCTTTGATATACTTTAGGTGGATTGAAGAGAGTGGTCTATTTAAACACAATGAG
CAGACATTTAATGCTATCGCAAGGGTCTTAGGTAGGGAAGAGTTCAGTGAGAAGTTCTGG
AAGTTAGTTGATGAAATGAGAACTGCAGGATTTGAAATGGAAAAAGAAACATATATTAGG
GTTCTGGATAACTTTGTTAAGAGGAAAATGATTAAGGATGCCGTGAACTTATATGAGTTT
GCAATGGTTGGCATAAACAAGCCATCCTCGGAGGACTGCACTTTTCTATTGAAGAAAATA
GTTGTTAGCAAGGAGCTTGATTTGGAATTGTTCTCAAAAGTTTTAAGGGTCTTCACAGAA
AGTGGCAATTCATTGACTAGTGCTAACCTCGATGCCATTCTCAAGTCTTTGACCAGTGTT
GATAGATTTGGCGAATGTAACAAGATATTGAAAGCAATGGAGGATGCTGGTTTCACACCT
AGTCATAATCAGCAGAGGAAAATTGCTTTTAATTTGGGTAGTGGTGGGAAGGATAAGGAA
TCCAATGAGTTTATGAATTATATAGAATCAACTGTCTCTACTCCAAATTCTAAAACATGG
ACATCTTTAATTGAAGGATACTGTGAAGCGGGTGATCTGGCTAAAGCTTCAGAAGCATTT
GAAATGATGATCGAAAAGGAAGGGTCATCCCATGCTGGGTATGCTTTAGAGCTCTTAGTG
TCCTTGCACTGCCGCAAGAGAAGAGCGATTCACGCATTCAATCTTGTTGAGAAGATGGTC
AATGAGAAAGAACTACATGTGTGGCATACCACATATAAGTTCTTGATAGGAAAATTATTG
GCCCAACGAGGTTTCGAGGAAGCTCTGGATGTTCTACATTTGATGAAAAGTCAAGATTAC
CCACCTTTTCTGAATCCCTTCATCAAGTACCTTTCAAAGACTGGAAGTGCTGATGATGCA
CTTGAATTTACTGCAGCAGTGACCCTGAAGAAACTTCCATCAACTTCTGTGTTTCTCAAT
TTGTTTGAAGCATACTTTAAAGCAGGAAGGCGAAGTGAAGCACAGGACTTCCTTGCAATA
TGTCCGAGATACATTAGGAACCATGCAGATGTTTTGAATCTTTTTTGTTCCAAGAAACCC
CAGAAAGCAACTGCCACTATTCCTGTGACTGCATAG