Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026051
CDS Infomation

pacid=37428209 polypeptide=PGSC0003DMP400017783 locus=PGSC0003DMG400010050 ID=PGSC0003DMT400026051.v4.03 annot-version=v4.03
Sequence

ATGGCCAATAAAGTTTTTTGTCCGAAACTCCTTAAGAACCTCGGATTTCATGTCCGCCGT
TTAAACTCAGCTCCGTCACCTCTTTCCGCCGTCCCACCGTTAAATTTCACTGGCGATTTT
AACGCCGTACCAAATTTGGTGGAACCCGCACCACAGATTAACACAAACCACCACGACCAT
CATAATACTAATAACATTATCAATTTCGATGATGTTAAGGAGCTATTCTACGGCGTTCCG
ACCAAGAAACTGATTCGATCATCGATGACGTTACAAATGGCTGCTATTGATCCCATGGTT
GATTTGGGTATGTGGATAATGAATTCTAAACTTATGGAAATGCCTGTTTTTAGGGAGGTT
ATGCTTGGATTTGTTAAAAATACATTTTATGAGCATTTTTGTGCCGGGAAAGACTTAACG
GAAGTTAGACGGACCGTTACCAATCTATCTGATTCTGGGTTAAAAGCCATGCTTGATTAT
GGGGTGGAACATGCCACCGATAATGAATCTTGTGAACAGAGTACGGCGGCCTTTATTCAA
ACGATTGAATCAACCGAATCACTTCCCGAATCTTCAGCAAGCTTTGTGGTAGCAAAGATA
ACTGCAATTTGTACACCAAGGCTTCTAAAAAGAATGAGTGATTTGTTAAGATGGGAACAG
AAAGATCCATCATTCAATCTTCCGTGGAAGCAAGAGTCGCTTCCACTTTTCGCCGAATCG
AGCCCTATTTATCACACTTGGAGCAAACCAGAGCCTCTAACGGTAGAGGAAGAACGTGAT
CTTCAATTAGCTCATGAAAGACTTAGGAAAATTTGCGAGAAATGTTTGGAACATCAAGTT
CCTTTACTAATTGATGCGGAAGACACAACAATTCAACCTGCAATTGATTACTTTGCGTAT
TCTGCAGCAATTAAGTACCATAAAGATGATCAGCCTTTGATATTCGGAACAATTCAAGCT
TACTTGAAGGACGCTAAGGAACGAATGGTTATCGCTAAAAAGGCTGCAGAGAAAATGGGA
GTTCCAATGGGATTTAAGCTTGTGAGGGGTGCTTACATGTGTAGTGAAAAGGAATTGGCT
TCTACTTTAGGATTCAAGTCTCCGATTCACGATAGCATTGAGCAAACACACGCTTGCTTC
AATTCGTGTGCGGAGTTTATGATTGAAGAGATTGCTAATGGATCTGGTGCAGTTGTTCTC
GCCACTCATAACATTGAGTCAGGAAAACTTGCTGCAACCAAAGCTATAGATTTGGGAATA
AAAAATGAGAGGCAAAATCTCCAATTTGCTCAGCTATATGGTATGGCAGATGGTCTTTCA
TTTGGGCTGAGAAATGCAGGATTTCAAGTTAGCAAGTATTTGCCATTTGGTCCTGTAGAG
CAGATTATGCATTACCTTATGAGGCGTGCTGAAGAAAACAGAGGCATGTTGTCAACATCG
GCATTCGATAGGCAACTCATGAGGAAGGAATTGAGCAGGAGACTGGAAGTGGCAACTTCT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400017783
PEP Infomation

pacid=37428209 transcript=PGSC0003DMT400026051 locus=PGSC0003DMG400010050 ID=PGSC0003DMT400026051.v4.03 annot-version=v4.03
Sequence

MANKVFCPKLLKNLGFHVRRLNSAPSPLSAVPPLNFTGDFNAVPNLVEPAPQINTNHHDH
HNTNNIINFDDVKELFYGVPTKKLIRSSMTLQMAAIDPMVDLGMWIMNSKLMEMPVFREV
MLGFVKNTFYEHFCAGKDLTEVRRTVTNLSDSGLKAMLDYGVEHATDNESCEQSTAAFIQ
TIESTESLPESSASFVVAKITAICTPRLLKRMSDLLRWEQKDPSFNLPWKQESLPLFAES
SPIYHTWSKPEPLTVEEERDLQLAHERLRKICEKCLEHQVPLLIDAEDTTIQPAIDYFAY
SAAIKYHKDDQPLIFGTIQAYLKDAKERMVIAKKAAEKMGVPMGFKLVRGAYMCSEKELA
STLGFKSPIHDSIEQTHACFNSCAEFMIEEIANGSGAVVLATHNIESGKLAATKAIDLGI
KNERQNLQFAQLYGMADGLSFGLRNAGFQVSKYLPFGPVEQIMHYLMRRAEENRGMLSTS
AFDRQLMRKELSRRLEVATS*

Transcript Sequence

Transcript ID

PGSC0003DMT400026051
Transcript Infomation

pacid=37428209 locus=PGSC0003DMG400010050 ID=PGSC0003DMT400026051.v4.03 annot-version=v4.03
Sequence

ATGGCCAATAAAGTTTTTTGTCCGAAACTCCTTAAGAACCTCGGATTTCATGTCCGCCGT
TTAAACTCAGCTCCGTCACCTCTTTCCGCCGTCCCACCGTTAAATTTCACTGGCGATTTT
AACGCCGTACCAAATTTGGTGGAACCCGCACCACAGATTAACACAAACCACCACGACCAT
CATAATACTAATAACATTATCAATTTCGATGATGTTAAGGAGCTATTCTACGGCGTTCCG
ACCAAGAAACTGATTCGATCATCGATGACGTTACAAATGGCTGCTATTGATCCCATGGTT
GATTTGGGTATGTGGATAATGAATTCTAAACTTATGGAAATGCCTGTTTTTAGGGAGGTT
ATGCTTGGATTTGTTAAAAATACATTTTATGAGCATTTTTGTGCCGGGAAAGACTTAACG
GAAGTTAGACGGACCGTTACCAATCTATCTGATTCTGGGTTAAAAGCCATGCTTGATTAT
GGGGTGGAACATGCCACCGATAATGAATCTTGTGAACAGAGTACGGCGGCCTTTATTCAA
ACGATTGAATCAACCGAATCACTTCCCGAATCTTCAGCAAGCTTTGTGGTAGCAAAGATA
ACTGCAATTTGTACACCAAGGCTTCTAAAAAGAATGAGTGATTTGTTAAGATGGGAACAG
AAAGATCCATCATTCAATCTTCCGTGGAAGCAAGAGTCGCTTCCACTTTTCGCCGAATCG
AGCCCTATTTATCACACTTGGAGCAAACCAGAGCCTCTAACGGTAGAGGAAGAACGTGAT
CTTCAATTAGCTCATGAAAGACTTAGGAAAATTTGCGAGAAATGTTTGGAACATCAAGTT
CCTTTACTAATTGATGCGGAAGACACAACAATTCAACCTGCAATTGATTACTTTGCGTAT
TCTGCAGCAATTAAGTACCATAAAGATGATCAGCCTTTGATATTCGGAACAATTCAAGCT
TACTTGAAGGACGCTAAGGAACGAATGGTTATCGCTAAAAAGGCTGCAGAGAAAATGGGA
GTTCCAATGGGATTTAAGCTTGTGAGGGGTGCTTACATGTGTAGTGAAAAGGAATTGGCT
TCTACTTTAGGATTCAAGTCTCCGATTCACGATAGCATTGAGCAAACACACGCTTGCTTC
AATTCGTGTGCGGAGTTTATGATTGAAGAGATTGCTAATGGATCTGGTGCAGTTGTTCTC
GCCACTCATAACATTGAGTCAGGAAAACTTGCTGCAACCAAAGCTATAGATTTGGGAATA
AAAAATGAGAGGCAAAATCTCCAATTTGCTCAGCTATATGGTATGGCAGATGGTCTTTCA
TTTGGGCTGAGAAATGCAGGATTTCAAGTTAGCAAGTATTTGCCATTTGGTCCTGTAGAG
CAGATTATGCATTACCTTATGAGGCGTGCTGAAGAAAACAGAGGCATGTTGTCAACATCG
GCATTCGATAGGCAACTCATGAGGAAGGAATTGAGCAGGAGACTGGAAGTGGCAACTTCT
TAA