Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026042
CDS Infomation

pacid=37428203 polypeptide=PGSC0003DMP400017774 locus=PGSC0003DMG402010047 ID=PGSC0003DMT400026042.v4.03 annot-version=v4.03
Sequence

ATGTCTACGCCGCCGAGGAAATCTTGGACCGGGTGGTCGCTGTCACCAAGAACCGAACCT
GTTGACAAGGGCAAAGGCATCGCCTTCACGGGTACTGCTCATAAAAGTTTGACGAGCCAA
GATTACGGAAATATGGATCAAGAAGCGCTAATTGAGAAGGTCTCCAAGCTCGAAAATGAG
CTTTTTGACTACCAATACAATATGGGTCTTCTCCTGCTTGAGAAGAAGGAATGGTCTTCT
AAGTTTGAAGAAATCAAGCAAGCCTTAGAAGAATTAAATGAGGCCTATAGAAGGGAACAA
GCAGCTCATTTAATTGCTATATCTGAAGTGGAGAAACGGGAAGAGAATTTAAGGAAGGCG
CTTGGAGTCGAGAAGCAATTTGCGCGAGAGCTAGAGAAAGAGTTGCGTGAGATGCGCTCG
GAGTATGCGGAGACCAAATATACCGCTGATTCAAAATTGGCCGAGGCAAATGCACTGGCT
ACTAGTGTTGAAGAGAAATCATTAGAGGTAGAAGCAAAGTTGCGTGCAGCTGATGCCAAG
CTTGCTGAGGTGAGCAGAAAGAGCTCTGAAATTGAGAGGAAACTTAATGCAGTCTATGCC
CAAGAAAATGCACTTCGAAGAGAACAGTCATCTTTCAATGCAGAGCGTGAAGCTTATGAG
ACTAATTTATCCAGACAAAGAGAGGACTTACAAGAATGGGAAAGAAAACTACAGGCAGCA
GAGGAGAAGTTGGCTGATGGCCGAAGATTGCTTAACCAAAGAGAGCAACGAGCCAATGAC
ACTGATAGAATTTTGAGGCAAAAGCAGAATGACCTTGAAGATGAGCAGAGGAAAATTGTC
ACCGCTAACTCAGTTTTGAGGAAGAAAGAAGATGATATGAGCAGCCAGATAGAAGATCTT
ACTCACAAGGAGAAGGAACTTGAAGATGCAAGAAAGAGTCTGGAGATAAAAGAGAGGGAG
TTGCTCGATCTACAGGAGAAACTGAATATTAAAGAGAGAGATGGTATTCAAAATCTAATG
GATGAACAGCGAAGTGTCCTGCATTCCAAGGAAGAGGAATTTGAATTGGAACTGAGGCAG
AGGCGGGCATCATTGGATGAGGAACTGAAAGGTAAGGTGCTTGAACTGGAGAAAAAGGAA
GCTGAAGTTAATCACATGGAAGAGAAGATTAAGAAACGAGAACAGGCCGTCGAAAAGAAA
ATGGAAAAAGTAAAGGAGAAGGAGAAGGATCATGAGTTGAAGTTAAAAGCACTGAAGGAA
AAGGAGAAATCTTTGAAAAATGAGGAAAAGTTTTTGGGAACTGAAAGGAAGCAACTAGAT
TCTGAGAAGGAGAATTTGCTAGCTCTGAAGGCTGAGCTTGAGAATGTAAGAGCTGAGCTT
GAAAAGCAACAGATCAAGATTAGTGAGGATACAGAACAACTTAAAATAATTGAAGATGAG
AGAATGGAATATGCTCGCCTACAATCGGAACTGAAGCAGGAGATAGACAAGTGTAGACTC
CTCCGAGAAGATCTATTGAAGGAAGCTGAAGATTTGAAGCAGGAAAAAGAAAGGTTTGAG
AGAGAATGGGAAGAACTAGATGAGAAAAGATCTGAGATCAAGATAAACTTGCAGGAACTT
AATGAACAGAGTGCGAATTTCAAAAAACTGAAGTGCACTGAAGAGGAAAGGATAAGCAAG
GAGAAGCTGGAAACAGAAAATTATGTCCAGAGGGAGTTGGAAGCCCTTAGAGTGGCAAGA
GAAGCATTTGAAGCTACCATGGATCATGACAAGTCAATATTAGCTGAGGAAACTCAAAGT
GAGAAAAGCCAAATGCTTCATGCTTATGAACAGCAGAAAAGGGAACTTGAAAGTGATATG
CAGAGGAAGCAGGAGGAAATGGAGTCTGCACTGCATGTACAAGAGAAACTCTTTGAGGAA
GAGAGGCAGAAGGAGCTCAGCAATATTGAATATTTAAAGGAAATCACCCATAGAGAAATG
GAAGAGATGAAATTAGAAAGAGTCAGTCTGGAGAAAGAAAAACAGGAAATTTCTGCTAAC
AAGGGGATTCTTGAAGTACAACAGTTGGAAATGAAAAAGGATATTGATGTGCTTGTTGGC
TTAAGCAGGAAGTTGAAGGATCAGAGGTTAGCTTACATTAAGGAAAGGGACAGGTTTATT
GATTTTGTCAAGCAGCAGAAGAGCTGCAGCTCTTGTGGAGAAGGAATTCATGTAATTGAG
TTTTATGACCTTGAAGCTCTAGCTGAAGCAGAGACTTTTGAGGCTCCTCCTCTGCCAAGT
GTTGCACAGGAATATTTGAAGGATGGTCTACAAGGATCTCCGGGAAGGGCTAGTGATGAG
CTGTCCCCTGGAGCTCTTAATACAGGATCCATGGTTTCTGCTGGAACCATGTCCTGGCTT
CGAAAATGTACATCCAAGATTCTCAAATTCTCACCAAGCAAAAACATTGGAAATGCTGCT
TCTGATTGTCTGATTGATGAATCTTCTCTGTCACAGAAGTGTGCAGGCATATCACCAAAT
AAACAATCAAACAAAGGAAATCCAATGAATCTGTCTGTTTCCATGAATGTTCTTGATGAT
CAGAGGGTTCAACAGGATGATGGCGTTAGAGAGGTCAAAGTTGGCCAAGACAATGTAGAA
GACTCTCATCATTCAGACATGAAAGCTGGCCAGCGCAGAACTGTCAAGAAAGGGCGTGGT
AGAAGTAGTAAAACAGAAAAAGCTGCAAATACAAGGACATTTCTTGGAAAAATTCCTAAA
GAGGGTGAGAATATCACCAATGGAAGTTTGGAGACTTCAGATAATATGAACGAGGAGAGC
CAGAGAGGATCTGGTCTTTTGGGTGGAGCACCGAGAAATGCCAGAAAGCGTAGTCATACA
TCACAGGGAACAGCTAGTGAGATTGATGGCAATAATAGTGAAGGACAGTCGGATAGTGTA
GCCAGCATTCGCGGGAAGAGGAGACAACAGGCTGCCCCTAGTGTGCAGGCTCATGCCGAA
AGAAGATACAATCTGCGCCGACCTAGAAGTGCTGCACCAGCAACATCCAATGGATCTTTG
CCAGACCCAGTCTCAGAATCTCAGGAAGAGAATCGGAACTCTAAAGCTTCCCTGCAAACT
CCTCAGGTGAACAACAGTGAAGATGTAAAAGATAGAAATTTCGTCATTGGTCATCCCACG
GTAGCTGAGAGCCCTTTGAATGATGCAGTGGACAATCAGGAAAGCAGTGCTAACATGGCA
AATGAGCTGTTGGATGATACAGGTTTGAGTGAAGAGGTGAATGAAACACCAAAACGACCT
TCAGCTTACAGAGATGAGGAAGGGTCTGATGACAGTGATGATGAGGAGGAAGAGATAGAA
CATCCCGGTGAAGTCTCTGTAGGGAAGAAGATTTGGACTTTCATCACGACATAG

Peptide Sequence

PEP ID

PGSC0003DMP400017774
PEP Infomation

pacid=37428203 transcript=PGSC0003DMT400026042 locus=PGSC0003DMG402010047 ID=PGSC0003DMT400026042.v4.03 annot-version=v4.03
Sequence

MSTPPRKSWTGWSLSPRTEPVDKGKGIAFTGTAHKSLTSQDYGNMDQEALIEKVSKLENE
LFDYQYNMGLLLLEKKEWSSKFEEIKQALEELNEAYRREQAAHLIAISEVEKREENLRKA
LGVEKQFARELEKELREMRSEYAETKYTADSKLAEANALATSVEEKSLEVEAKLRAADAK
LAEVSRKSSEIERKLNAVYAQENALRREQSSFNAEREAYETNLSRQREDLQEWERKLQAA
EEKLADGRRLLNQREQRANDTDRILRQKQNDLEDEQRKIVTANSVLRKKEDDMSSQIEDL
THKEKELEDARKSLEIKERELLDLQEKLNIKERDGIQNLMDEQRSVLHSKEEEFELELRQ
RRASLDEELKGKVLELEKKEAEVNHMEEKIKKREQAVEKKMEKVKEKEKDHELKLKALKE
KEKSLKNEEKFLGTERKQLDSEKENLLALKAELENVRAELEKQQIKISEDTEQLKIIEDE
RMEYARLQSELKQEIDKCRLLREDLLKEAEDLKQEKERFEREWEELDEKRSEIKINLQEL
NEQSANFKKLKCTEEERISKEKLETENYVQRELEALRVAREAFEATMDHDKSILAEETQS
EKSQMLHAYEQQKRELESDMQRKQEEMESALHVQEKLFEEERQKELSNIEYLKEITHREM
EEMKLERVSLEKEKQEISANKGILEVQQLEMKKDIDVLVGLSRKLKDQRLAYIKERDRFI
DFVKQQKSCSSCGEGIHVIEFYDLEALAEAETFEAPPLPSVAQEYLKDGLQGSPGRASDE
LSPGALNTGSMVSAGTMSWLRKCTSKILKFSPSKNIGNAASDCLIDESSLSQKCAGISPN
KQSNKGNPMNLSVSMNVLDDQRVQQDDGVREVKVGQDNVEDSHHSDMKAGQRRTVKKGRG
RSSKTEKAANTRTFLGKIPKEGENITNGSLETSDNMNEESQRGSGLLGGAPRNARKRSHT
SQGTASEIDGNNSEGQSDSVASIRGKRRQQAAPSVQAHAERRYNLRRPRSAAPATSNGSL
PDPVSESQEENRNSKASLQTPQVNNSEDVKDRNFVIGHPTVAESPLNDAVDNQESSANMA
NELLDDTGLSEEVNETPKRPSAYRDEEGSDDSDDEEEEIEHPGEVSVGKKIWTFITT*

Transcript Sequence

Transcript ID

PGSC0003DMT400026042
Transcript Infomation

pacid=37428203 locus=PGSC0003DMG402010047 ID=PGSC0003DMT400026042.v4.03 annot-version=v4.03
Sequence

ATGTCTACGCCGCCGAGGAAATCTTGGACCGGGTGGTCGCTGTCACCAAGAACCGAACCT
GTTGACAAGGGCAAAGGCATCGCCTTCACGGGTACTGCTCATAAAAGTTTGACGAGCCAA
GATTACGGAAATATGGATCAAGAAGCGCTAATTGAGAAGGTCTCCAAGCTCGAAAATGAG
CTTTTTGACTACCAATACAATATGGGTCTTCTCCTGCTTGAGAAGAAGGAATGGTCTTCT
AAGTTTGAAGAAATCAAGCAAGCCTTAGAAGAATTAAATGAGGCCTATAGAAGGGAACAA
GCAGCTCATTTAATTGCTATATCTGAAGTGGAGAAACGGGAAGAGAATTTAAGGAAGGCG
CTTGGAGTCGAGAAGCAATTTGCGCGAGAGCTAGAGAAAGAGTTGCGTGAGATGCGCTCG
GAGTATGCGGAGACCAAATATACCGCTGATTCAAAATTGGCCGAGGCAAATGCACTGGCT
ACTAGTGTTGAAGAGAAATCATTAGAGGTAGAAGCAAAGTTGCGTGCAGCTGATGCCAAG
CTTGCTGAGGTGAGCAGAAAGAGCTCTGAAATTGAGAGGAAACTTAATGCAGTCTATGCC
CAAGAAAATGCACTTCGAAGAGAACAGTCATCTTTCAATGCAGAGCGTGAAGCTTATGAG
ACTAATTTATCCAGACAAAGAGAGGACTTACAAGAATGGGAAAGAAAACTACAGGCAGCA
GAGGAGAAGTTGGCTGATGGCCGAAGATTGCTTAACCAAAGAGAGCAACGAGCCAATGAC
ACTGATAGAATTTTGAGGCAAAAGCAGAATGACCTTGAAGATGAGCAGAGGAAAATTGTC
ACCGCTAACTCAGTTTTGAGGAAGAAAGAAGATGATATGAGCAGCCAGATAGAAGATCTT
ACTCACAAGGAGAAGGAACTTGAAGATGCAAGAAAGAGTCTGGAGATAAAAGAGAGGGAG
TTGCTCGATCTACAGGAGAAACTGAATATTAAAGAGAGAGATGGTATTCAAAATCTAATG
GATGAACAGCGAAGTGTCCTGCATTCCAAGGAAGAGGAATTTGAATTGGAACTGAGGCAG
AGGCGGGCATCATTGGATGAGGAACTGAAAGGTAAGGTGCTTGAACTGGAGAAAAAGGAA
GCTGAAGTTAATCACATGGAAGAGAAGATTAAGAAACGAGAACAGGCCGTCGAAAAGAAA
ATGGAAAAAGTAAAGGAGAAGGAGAAGGATCATGAGTTGAAGTTAAAAGCACTGAAGGAA
AAGGAGAAATCTTTGAAAAATGAGGAAAAGTTTTTGGGAACTGAAAGGAAGCAACTAGAT
TCTGAGAAGGAGAATTTGCTAGCTCTGAAGGCTGAGCTTGAGAATGTAAGAGCTGAGCTT
GAAAAGCAACAGATCAAGATTAGTGAGGATACAGAACAACTTAAAATAATTGAAGATGAG
AGAATGGAATATGCTCGCCTACAATCGGAACTGAAGCAGGAGATAGACAAGTGTAGACTC
CTCCGAGAAGATCTATTGAAGGAAGCTGAAGATTTGAAGCAGGAAAAAGAAAGGTTTGAG
AGAGAATGGGAAGAACTAGATGAGAAAAGATCTGAGATCAAGATAAACTTGCAGGAACTT
AATGAACAGAGTGCGAATTTCAAAAAACTGAAGTGCACTGAAGAGGAAAGGATAAGCAAG
GAGAAGCTGGAAACAGAAAATTATGTCCAGAGGGAGTTGGAAGCCCTTAGAGTGGCAAGA
GAAGCATTTGAAGCTACCATGGATCATGACAAGTCAATATTAGCTGAGGAAACTCAAAGT
GAGAAAAGCCAAATGCTTCATGCTTATGAACAGCAGAAAAGGGAACTTGAAAGTGATATG
CAGAGGAAGCAGGAGGAAATGGAGTCTGCACTGCATGTACAAGAGAAACTCTTTGAGGAA
GAGAGGCAGAAGGAGCTCAGCAATATTGAATATTTAAAGGAAATCACCCATAGAGAAATG
GAAGAGATGAAATTAGAAAGAGTCAGTCTGGAGAAAGAAAAACAGGAAATTTCTGCTAAC
AAGGGGATTCTTGAAGTACAACAGTTGGAAATGAAAAAGGATATTGATGTGCTTGTTGGC
TTAAGCAGGAAGTTGAAGGATCAGAGGTTAGCTTACATTAAGGAAAGGGACAGGTTTATT
GATTTTGTCAAGCAGCAGAAGAGCTGCAGCTCTTGTGGAGAAGGAATTCATGTAATTGAG
TTTTATGACCTTGAAGCTCTAGCTGAAGCAGAGACTTTTGAGGCTCCTCCTCTGCCAAGT
GTTGCACAGGAATATTTGAAGGATGGTCTACAAGGATCTCCGGGAAGGGCTAGTGATGAG
CTGTCCCCTGGAGCTCTTAATACAGGATCCATGGTTTCTGCTGGAACCATGTCCTGGCTT
CGAAAATGTACATCCAAGATTCTCAAATTCTCACCAAGCAAAAACATTGGAAATGCTGCT
TCTGATTGTCTGATTGATGAATCTTCTCTGTCACAGAAGTGTGCAGGCATATCACCAAAT
AAACAATCAAACAAAGGAAATCCAATGAATCTGTCTGTTTCCATGAATGTTCTTGATGAT
CAGAGGGTTCAACAGGATGATGGCGTTAGAGAGGTCAAAGTTGGCCAAGACAATGTAGAA
GACTCTCATCATTCAGACATGAAAGCTGGCCAGCGCAGAACTGTCAAGAAAGGGCGTGGT
AGAAGTAGTAAAACAGAAAAAGCTGCAAATACAAGGACATTTCTTGGAAAAATTCCTAAA
GAGGGTGAGAATATCACCAATGGAAGTTTGGAGACTTCAGATAATATGAACGAGGAGAGC
CAGAGAGGATCTGGTCTTTTGGGTGGAGCACCGAGAAATGCCAGAAAGCGTAGTCATACA
TCACAGGGAACAGCTAGTGAGATTGATGGCAATAATAGTGAAGGACAGTCGGATAGTGTA
GCCAGCATTCGCGGGAAGAGGAGACAACAGGCTGCCCCTAGTGTGCAGGCTCATGCCGAA
AGAAGATACAATCTGCGCCGACCTAGAAGTGCTGCACCAGCAACATCCAATGGATCTTTG
CCAGACCCAGTCTCAGAATCTCAGGAAGAGAATCGGAACTCTAAAGCTTCCCTGCAAACT
CCTCAGGTGAACAACAGTGAAGATGTAAAAGATAGAAATTTCGTCATTGGTCATCCCACG
GTAGCTGAGAGCCCTTTGAATGATGCAGTGGACAATCAGGAAAGCAGTGCTAACATGGCA
AATGAGCTGTTGGATGATACAGGTTTGAGTGAAGAGGTGAATGAAACACCAAAACGACCT
TCAGCTTACAGAGATGAGGAAGGGTCTGATGACAGTGATGATGAGGAGGAAGAGATAGAA
CATCCCGGTGAAGTCTCTGTAGGGAAGAAGATTTGGACTTTCATCACGACATAG