Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026040
CDS Infomation

pacid=37427288 polypeptide=PGSC0003DMP400017772 locus=PGSC0003DMG401010047 ID=PGSC0003DMT400026040.v4.03 annot-version=v4.03
Sequence

ATGGATTCTCGCCGTGTTCCTCGAACTGTGAGCGACCCTAAGGTTCGTCAAGTCGGGTTC
TTCGCTCCACCCGACCGGTCCCAATTGGGTCCATTCATCCCATTTTCCTCTTCCCCTCCC
GTTTCCGATCTATCCCCTTCCGGTAACTCTCTTTCCCCTGTTATGATCCCTCCTCCTCGT
CACCTCTCCGTCGACGTATCCCTACCCCGTCCCGGTAATCTTTATCCGGCACCCTTGTCC
CCTCTCCGACGTGATTCTATCCCAGTCGGAAGCTACAATCCATCTGAATTCTCTTCTCCT
ACTACCACTAACTTACCTGATGATACCTCCTCTCCTGGATGGCATCGCAGGGGCAGTTCT
GGTAAATTTGCTACTTCTCTTCCCTCTGCAGGATTTGAGTTGCCTGCTGCCAAGCAGAAC
AGCTTTACTGCCTCTAGATTGACTACAGTCTCCAACGTGAATGCGCCTTTGGGATTATCA
GACAAGGATGGGGAAGTGCAAAAGGAACGAACTGCAAGTTCAAAGCCATTGAAAGAGAAA
ACAACCAAGGCTGAGAGGCGTGCTCTCCAGGAGGCTCAAAGAGCTGCAAAAGCTGCTTCT
AAAGGTGAAGGAACTAAGACCACCACTGCTGCTTCTGAAAATTTAAACCCAGTAAAGATT
GCCAAGGGCACTTTACAAAAGAAAGAAAGCCCTCCTGTTGCAGCTCCTGAAAAAAAGGGC
AGTGATCGTGCTACAGATAAAGATAGGAAAAAAGATGTTCCTCATCCACGGATGCAATTT
GATGATAAGAGTCGTGTGGAGAAGGCAAAGAAGCGCTCAGTAGTGAAGCAAACTGAAGCC
AAAAACAGGGTTGAACTTTTTAGGCATTTGCCTCAGTATGAACATGGAACAAGACTTCCC
GAGCTTGAATCAAAATTCTTCCAGCTAGATCCAGTTCATCCTGCTGTTTTTAAGGTTGGA
CTTAGATATTTGGCTGGAGATATATCTGGTGGGAATGCCCGCTGTATTGCTATGCTTCAA
GCTCTCCAAGAGTCCATCAAAGACTACTCAACTCCCCCGGAGAAAGTTCTTATAAGAGAC
TTGACTGCAAAAGTTAATTGTTATGTTTCATTTTTGATCGAGTGCAGGCCCCTCTCAATC
AGCATGGGGAATGCTATTAGGTTCCTTAAAACTAGGATTGCGAAATTGCCTTTGACTTTG
TCAGAGTCAGAAGCTAAAACCACTCTTGTGACAGATATTGATCACTTCATAAGTGAAAAG
ATAATACTTGCAGACAAGGTGATAGTCAAGCATGCAGTAACTAAAATAAGGGATGGTGAT
GTTCTTCTCACTTATGGATCCTCCTCTGCTGTTGAAATGATTCTGTTACATGCTCATGAG
CTTGGCAAGGATTTCCGTGTCGTAGTAGTTGACTCACGTCCAAAGCTTGAAGGGAGATTA
CTACTTCGTCGGTTGGTGGGGAAGGGTGTTAAGTGTACATACACTCATATAAATGCCATT
TCTTATATCATGCATGAAGTTACAAGAGTACTTTTGGGTGCTTCATCAGTTTTGTCCAAT
GGAACTGTTTATTCAAGGGTTGGAACAGCGAGCGTTGCTATGGTTGCTCATTCATTCCGA
GTTCCTGTCTTGATATGTTGTGAAGCGTATAAATTTCATGAAAGGGTTCAACTTGACTCG
ATTTGCTCTAATGAACTTGGTGATCCAGAAACTATAGCTAAGGTTCCTGGTAGGATGGAA
ATTAACCACTTGGATGGGTGGGCTAACAGTGATAATCTTCAACTTTTGAATCTGATTTAC
GATGCAACACCTTCAGATTATGTATCAATGATAATTACAGATTATGGCATGATCCCTCCG
ACAAGTGTTCCTGTAATAGTTCGCGAGTATCGCAGAGAATATTTATGGACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400017772
PEP Infomation

pacid=37427288 transcript=PGSC0003DMT400026040 locus=PGSC0003DMG401010047 ID=PGSC0003DMT400026040.v4.03 annot-version=v4.03
Sequence

MDSRRVPRTVSDPKVRQVGFFAPPDRSQLGPFIPFSSSPPVSDLSPSGNSLSPVMIPPPR
HLSVDVSLPRPGNLYPAPLSPLRRDSIPVGSYNPSEFSSPTTTNLPDDTSSPGWHRRGSS
GKFATSLPSAGFELPAAKQNSFTASRLTTVSNVNAPLGLSDKDGEVQKERTASSKPLKEK
TTKAERRALQEAQRAAKAASKGEGTKTTTAASENLNPVKIAKGTLQKKESPPVAAPEKKG
SDRATDKDRKKDVPHPRMQFDDKSRVEKAKKRSVVKQTEAKNRVELFRHLPQYEHGTRLP
ELESKFFQLDPVHPAVFKVGLRYLAGDISGGNARCIAMLQALQESIKDYSTPPEKVLIRD
LTAKVNCYVSFLIECRPLSISMGNAIRFLKTRIAKLPLTLSESEAKTTLVTDIDHFISEK
IILADKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKDFRVVVVDSRPKLEGRL
LLRRLVGKGVKCTYTHINAISYIMHEVTRVLLGASSVLSNGTVYSRVGTASVAMVAHSFR
VPVLICCEAYKFHERVQLDSICSNELGDPETIAKVPGRMEINHLDGWANSDNLQLLNLIY
DATPSDYVSMIITDYGMIPPTSVPVIVREYRREYLWT*

Transcript Sequence

Transcript ID

PGSC0003DMT400026040
Transcript Infomation

pacid=37427288 locus=PGSC0003DMG401010047 ID=PGSC0003DMT400026040.v4.03 annot-version=v4.03
Sequence

ATGGATTCTCGCCGTGTTCCTCGAACTGTGAGCGACCCTAAGGTTCGTCAAGTCGGGTTC
TTCGCTCCACCCGACCGGTCCCAATTGGGTCCATTCATCCCATTTTCCTCTTCCCCTCCC
GTTTCCGATCTATCCCCTTCCGGTAACTCTCTTTCCCCTGTTATGATCCCTCCTCCTCGT
CACCTCTCCGTCGACGTATCCCTACCCCGTCCCGGTAATCTTTATCCGGCACCCTTGTCC
CCTCTCCGACGTGATTCTATCCCAGTCGGAAGCTACAATCCATCTGAATTCTCTTCTCCT
ACTACCACTAACTTACCTGATGATACCTCCTCTCCTGGATGGCATCGCAGGGGCAGTTCT
GGTAAATTTGCTACTTCTCTTCCCTCTGCAGGATTTGAGTTGCCTGCTGCCAAGCAGAAC
AGCTTTACTGCCTCTAGATTGACTACAGTCTCCAACGTGAATGCGCCTTTGGGATTATCA
GACAAGGATGGGGAAGTGCAAAAGGAACGAACTGCAAGTTCAAAGCCATTGAAAGAGAAA
ACAACCAAGGCTGAGAGGCGTGCTCTCCAGGAGGCTCAAAGAGCTGCAAAAGCTGCTTCT
AAAGGTGAAGGAACTAAGACCACCACTGCTGCTTCTGAAAATTTAAACCCAGTAAAGATT
GCCAAGGGCACTTTACAAAAGAAAGAAAGCCCTCCTGTTGCAGCTCCTGAAAAAAAGGGC
AGTGATCGTGCTACAGATAAAGATAGGAAAAAAGATGTTCCTCATCCACGGATGCAATTT
GATGATAAGAGTCGTGTGGAGAAGGCAAAGAAGCGCTCAGTAGTGAAGCAAACTGAAGCC
AAAAACAGGGTTGAACTTTTTAGGCATTTGCCTCAGTATGAACATGGAACAAGACTTCCC
GAGCTTGAATCAAAATTCTTCCAGCTAGATCCAGTTCATCCTGCTGTTTTTAAGGTTGGA
CTTAGATATTTGGCTGGAGATATATCTGGTGGGAATGCCCGCTGTATTGCTATGCTTCAA
GCTCTCCAAGAGTCCATCAAAGACTACTCAACTCCCCCGGAGAAAGTTCTTATAAGAGAC
TTGACTGCAAAAGTTAATTGTTATGTTTCATTTTTGATCGAGTGCAGGCCCCTCTCAATC
AGCATGGGGAATGCTATTAGGTTCCTTAAAACTAGGATTGCGAAATTGCCTTTGACTTTG
TCAGAGTCAGAAGCTAAAACCACTCTTGTGACAGATATTGATCACTTCATAAGTGAAAAG
ATAATACTTGCAGACAAGGTGATAGTCAAGCATGCAGTAACTAAAATAAGGGATGGTGAT
GTTCTTCTCACTTATGGATCCTCCTCTGCTGTTGAAATGATTCTGTTACATGCTCATGAG
CTTGGCAAGGATTTCCGTGTCGTAGTAGTTGACTCACGTCCAAAGCTTGAAGGGAGATTA
CTACTTCGTCGGTTGGTGGGGAAGGGTGTTAAGTGTACATACACTCATATAAATGCCATT
TCTTATATCATGCATGAAGTTACAAGAGTACTTTTGGGTGCTTCATCAGTTTTGTCCAAT
GGAACTGTTTATTCAAGGGTTGGAACAGCGAGCGTTGCTATGGTTGCTCATTCATTCCGA
GTTCCTGTCTTGATATGTTGTGAAGCGTATAAATTTCATGAAAGGGTTCAACTTGACTCG
ATTTGCTCTAATGAACTTGGTGATCCAGAAACTATAGCTAAGGTTCCTGGTAGGATGGAA
ATTAACCACTTGGATGGGTGGGCTAACAGTGATAATCTTCAACTTTTGAATCTGATTTAC
GATGCAACACCTTCAGATTATGTATCAATGATAATTACAGATTATGGCATGATCCCTCCG
ACAAGTGTTCCTGTAATAGTTCGCGAGTATCGCAGAGAATATTTATGGACATGA