Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026018
CDS Infomation

pacid=37425386 polypeptide=PGSC0003DMP400017753 locus=PGSC0003DMG400010040 ID=PGSC0003DMT400026018.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAATTAGACTGACAAAGGTAGAACAAGGCCAAACCAAAATTAGGAATGTTCCA
ATTGCTGTGACCCCAGAGGGTTTCTGGTGTTGTCCCTCTCCCAATGTGTTTCAGAAGAGC
CTTAAAACACCGAATCCTTTAAACAAGCCCAAATCTCCTCTTCCTACAACTCAAACCCCG
GCTCACAAGAAACAAACTTCAGTAACTGAGAAAAGACCGGCTAGTGCTGCACCTAAGTCG
GGTGCTGTTTCTGATGAGAAACGAGGTGTTAGTGCTGATACACCCACTGTTACTGCATCG
GTGCCTGCAGAGAGAACTCCTCGGTCCAAGACTGAAAATGTACCAAGGAAAGTGTCGATT
GAGTTTGGTGAACCTGGAACTAGTGATCTTAGGGTGATCTTGCTAGGAAAGCAGGGGTTC
ACTGTGAAGTTGAATGTTCACAAGAATATTCTGGTAGAAAATAGCAGTTTTTTTGCTAAT
AAAATATCAGTACGGCAGCCAGTTTTTCCTTGCATTGAAATTGATGATTGTGAGGATGTT
GAGATATGTGTTGAAACCATCGGCCTCATGTATTGCAAAGAAATGAAGCAGCGGTTGATC
AAGCAAAGTGTTTCTCGTGTTTTGCGTATTATCAAGGTAGCGGAACAACTTGGATTTAAA
TCATGCATGCAGTCATGTTTAGAGTATTTGGAAGCAGTACCGTGGGTTGGGGAAGAAGAA
GAGGAGAAAGTTGTTTCTTCAGTCCTACGGCTGCAGAGTGAGGGAATTGGGGTGACCCCT
GTGTTAAAGAGGGTGTCATCTGATATTTCTAAGCCTCACAAGGACACATTCTCGCATATC
CTAGAGCTGGTGCTCAAAAGTAATGAAGAGAGAGGCCGCCGGGAAATGAAATCTGTTGTA
CTGAAGCTTCTTAGGGAAAATAACTGTCTTCCAAGTTCCTCTGGCTCAGTTGACAGTTAC
AATGAAATAATATATGGCTCATGTAGAAGTTGCCTGGATTCAATATTGATTCTGTTCAAA
CAAGCAGCTGAACCCGAGTTTAGCAGCAACTCTACTGATTGCAGAGAACCAGTAGTGAAG
CAGATATATCTAGAGGCTGATAACCTCTCTTGGATGCTTGAAATTTTAACTGACAGGCAA
GCAGCAGATGAATTTGCGGTGATGTGGGCTAGCCAGCAGGAATTGGCTTCTCTGCATACT
AAGCTACCTATTGTGTCTCGCCACCACGTCAGCTGCATCACAGCAAAGCTTTTTGTAGGA
ATAGGAAAAGGGGAGCTTCTGCCATCAAAGGACACACGCAACCTCTTGTTACAGACATGG
TTACAGCCATTGATCAATGACTACAGCTGGTTGCAGCATGGATCCAGGTCGTTTGACCGA
AAGGTTGTGGAGGAAGGAATTGGCAGGACAATCCTAACACTACCTCTGGAGGAACAGCAG
AGCATTTTGCTTTCTTGGTTAGGCAGTTTCCTCAAGTCTGGTGATAATTGTCCAAATCTT
CAGAGAGCATTTGAAGTCTGGTGGCGTCGTACATTTGTCAGACCCTATGCAGAGTCAGGA
AATACCCGCCGATTAGACCATGTTACGACTCCAAAGGTAACGGAGCATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400017753
PEP Infomation

pacid=37425386 transcript=PGSC0003DMT400026018 locus=PGSC0003DMG400010040 ID=PGSC0003DMT400026018.v4.03 annot-version=v4.03
Sequence

MAEIRLTKVEQGQTKIRNVPIAVTPEGFWCCPSPNVFQKSLKTPNPLNKPKSPLPTTQTP
AHKKQTSVTEKRPASAAPKSGAVSDEKRGVSADTPTVTASVPAERTPRSKTENVPRKVSI
EFGEPGTSDLRVILLGKQGFTVKLNVHKNILVENSSFFANKISVRQPVFPCIEIDDCEDV
EICVETIGLMYCKEMKQRLIKQSVSRVLRIIKVAEQLGFKSCMQSCLEYLEAVPWVGEEE
EEKVVSSVLRLQSEGIGVTPVLKRVSSDISKPHKDTFSHILELVLKSNEERGRREMKSVV
LKLLRENNCLPSSSGSVDSYNEIIYGSCRSCLDSILILFKQAAEPEFSSNSTDCREPVVK
QIYLEADNLSWMLEILTDRQAADEFAVMWASQQELASLHTKLPIVSRHHVSCITAKLFVG
IGKGELLPSKDTRNLLLQTWLQPLINDYSWLQHGSRSFDRKVVEEGIGRTILTLPLEEQQ
SILLSWLGSFLKSGDNCPNLQRAFEVWWRRTFVRPYAESGNTRRLDHVTTPKVTEH*

Transcript Sequence

Transcript ID

PGSC0003DMT400026018
Transcript Infomation

pacid=37425386 locus=PGSC0003DMG400010040 ID=PGSC0003DMT400026018.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAATTAGACTGACAAAGGTAGAACAAGGCCAAACCAAAATTAGGAATGTTCCA
ATTGCTGTGACCCCAGAGGGTTTCTGGTGTTGTCCCTCTCCCAATGTGTTTCAGAAGAGC
CTTAAAACACCGAATCCTTTAAACAAGCCCAAATCTCCTCTTCCTACAACTCAAACCCCG
GCTCACAAGAAACAAACTTCAGTAACTGAGAAAAGACCGGCTAGTGCTGCACCTAAGTCG
GGTGCTGTTTCTGATGAGAAACGAGGTGTTAGTGCTGATACACCCACTGTTACTGCATCG
GTGCCTGCAGAGAGAACTCCTCGGTCCAAGACTGAAAATGTACCAAGGAAAGTGTCGATT
GAGTTTGGTGAACCTGGAACTAGTGATCTTAGGGTGATCTTGCTAGGAAAGCAGGGGTTC
ACTGTGAAGTTGAATGTTCACAAGAATATTCTGGTAGAAAATAGCAGTTTTTTTGCTAAT
AAAATATCAGTACGGCAGCCAGTTTTTCCTTGCATTGAAATTGATGATTGTGAGGATGTT
GAGATATGTGTTGAAACCATCGGCCTCATGTATTGCAAAGAAATGAAGCAGCGGTTGATC
AAGCAAAGTGTTTCTCGTGTTTTGCGTATTATCAAGGTAGCGGAACAACTTGGATTTAAA
TCATGCATGCAGTCATGTTTAGAGTATTTGGAAGCAGTACCGTGGGTTGGGGAAGAAGAA
GAGGAGAAAGTTGTTTCTTCAGTCCTACGGCTGCAGAGTGAGGGAATTGGGGTGACCCCT
GTGTTAAAGAGGGTGTCATCTGATATTTCTAAGCCTCACAAGGACACATTCTCGCATATC
CTAGAGCTGGTGCTCAAAAGTAATGAAGAGAGAGGCCGCCGGGAAATGAAATCTGTTGTA
CTGAAGCTTCTTAGGGAAAATAACTGTCTTCCAAGTTCCTCTGGCTCAGTTGACAGTTAC
AATGAAATAATATATGGCTCATGTAGAAGTTGCCTGGATTCAATATTGATTCTGTTCAAA
CAAGCAGCTGAACCCGAGTTTAGCAGCAACTCTACTGATTGCAGAGAACCAGTAGTGAAG
CAGATATATCTAGAGGCTGATAACCTCTCTTGGATGCTTGAAATTTTAACTGACAGGCAA
GCAGCAGATGAATTTGCGGTGATGTGGGCTAGCCAGCAGGAATTGGCTTCTCTGCATACT
AAGCTACCTATTGTGTCTCGCCACCACGTCAGCTGCATCACAGCAAAGCTTTTTGTAGGA
ATAGGAAAAGGGGAGCTTCTGCCATCAAAGGACACACGCAACCTCTTGTTACAGACATGG
TTACAGCCATTGATCAATGACTACAGCTGGTTGCAGCATGGATCCAGGTCGTTTGACCGA
AAGGTTGTGGAGGAAGGAATTGGCAGGACAATCCTAACACTACCTCTGGAGGAACAGCAG
AGCATTTTGCTTTCTTGGTTAGGCAGTTTCCTCAAGTCTGGTGATAATTGTCCAAATCTT
CAGAGAGCATTTGAAGTCTGGTGGCGTCGTACATTTGTCAGACCCTATGCAGAGTCAGGA
AATACCCGCCGATTAGACCATGTTACGACTCCAAAGGTAACGGAGCATTAG