Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026008
CDS Infomation

pacid=37429116 polypeptide=PGSC0003DMP400017745 locus=PGSC0003DMG400010034 ID=PGSC0003DMT400026008.v4.03 annot-version=v4.03
Sequence

ATGCCGCACTCTGACCACCCCACCACCAAAGGCCAAGCATGGTTTTGTACTACAGGATTA
CCCAGTGATATCATCATCGAAGTTGAAGATATGACCTTCCATCTTCACAAGTTTCCCCTG
ATGTCAAAAAGTAGAAAGCTTCATGAAATGATAACAGAGCAAGAGACAAATGCAAGTAGC
AGTAAAATCCAAAAACCGGCTGAACGAGACAACGATTGTGATGGTGATGAGGAGATTGAA
GAAGAAGAGGATAATGAGGAGGACCAGCAATACTGTATTTCGTTCCCTGATTTCCCGGGC
GGTTCAGAGACATTTGAGACGGCTGCCAAGTTCTGTTATGGTGTGAAAATCGAGTTGTCT
GCATCGAACGTTGCTCCACTGCGCTGTGCGGGTGAGTACCTGGAGATGACTGAAGAGTAC
TCCGAGGATAACCTCATTTCCAAGACGGAGAGGTTTCTTTCACAGACAGTGCTAAAGAGT
ATTAAGGACTCCATTAGAACCCTAAACTCGTGCAAGAACATGTTGCCGTTAGCAGAAACA
CTCGGCATTGTTCAGAGATGCATTGATGCCGTTGCTGTTAGAGCTTCAACTGCTGATCCG
TCTCTCTTTGGCTGGCCGGTGAATGATCACGGCCCTGGAAATGGAGTTGAAGCAAATACT
CGCCGTAAAGGTGCCAACAGAGGAGGTGGTATGGATTCGTGGTTCGAAGAGCTAGGGTAC
TTGAGCTTGCCTTTGTTCAAGCGTTTGATTTCTGCAATGAAAAGTAGAGATTTGAGTTCA
GAAGTTATCGAGAGCTGTCTAATGTATTATGCGAAGAAGTACATTCCAGGAATTTCACGC
TCAAGTAGGAATGCATCTTCGTCTTCGATACCATCGGAGAACGAACAGAGAGAGCTTTTG
GAGACTATAATTACTAACCTTCCTGAAGAAACTAGCTCAAGAACTTCAACAACCACAAGG
ATTCTCTTCGGTTTATTGAGAACAGCGAACATACTAAATGCTTCGGAAGCTGCTCGAGCT
TCACTGGAGAGGAAAATCGGATCTCAACTGGAGCAAGCCACATTAGACGATCTTCTCATT
CCGAGCTACTCTTATCTGAATGAAACGTTATATGATGTCGCTTGTGTGGAAAGAATATTA
GGATATTTTTTAAACGGATTGGAAGAGAGATCTACCGTTAGAATTCAAGGCGAAGAAGAG
AACATCAGTGTCAGATCCACGGCATTAATGTTAGTCGGAAAGTTAATCGACGGTTACTTA
TCAGAAATAGCTTCTGATAATAATTTATTACCGGAAAAATTCTGCGAATTAGCTGTTGCA
TTGCCGGACCAAGCAAGACTCTTTGATGATGGCCTTTACAGAGCTGTCGATGTGTATCTC
AAGGCGCATCCATGGATATCGGAAGCGGAGAGGGAGCAAATATGCGGTGTAATGGATTGT
CAAAAGCTAACATTAGAGGCGTGTACACACGCAGCTCAGAATGAACGGCTTCCACTTAGA
GCCGTAGTTCAGGTACTATTCTTCGAACAACTCCAACTCCGGCAAGCAATTGCCGGAACT
CTTATGGTCGCCGATGTGAATCCAGAAGAAATCCCGCGGCTGTCAATCATGGACGGCAGG
GAAGGGGAGGGTGAAGGTGGAGAGCAAGAGGAAACGACAGGAGTAGTTGGAATGGCACGT
GCACAGGAAGGGAGTAGCACGTGGAGGAAAACAGTGAGGGAGAATCAAGTGCTACGCTTG
GATATGGATAGCATGAGGACGCGAGTACAAGAACTGGAACGCGAATGCTCCTCAATGAAG
AAAGTAATCCAGAAGATAGATAAGGTAGGCAAACACGGCAGCAACGGCGGCAGAGAAGGA
GGAGGAGGAGGGTGGAGAAAGAAGTTGGGATGTAAATTCAAGACGCAAGTGTGTGACTCG
CATGAGCCAACGGTTGTGGAGGCCAAGAAAGGACGGGGCCATCGTCATCAACATCAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400017745
PEP Infomation

pacid=37429116 transcript=PGSC0003DMT400026008 locus=PGSC0003DMG400010034 ID=PGSC0003DMT400026008.v4.03 annot-version=v4.03
Sequence

MPHSDHPTTKGQAWFCTTGLPSDIIIEVEDMTFHLHKFPLMSKSRKLHEMITEQETNASS
SKIQKPAERDNDCDGDEEIEEEEDNEEDQQYCISFPDFPGGSETFETAAKFCYGVKIELS
ASNVAPLRCAGEYLEMTEEYSEDNLISKTERFLSQTVLKSIKDSIRTLNSCKNMLPLAET
LGIVQRCIDAVAVRASTADPSLFGWPVNDHGPGNGVEANTRRKGANRGGGMDSWFEELGY
LSLPLFKRLISAMKSRDLSSEVIESCLMYYAKKYIPGISRSSRNASSSSIPSENEQRELL
ETIITNLPEETSSRTSTTTRILFGLLRTANILNASEAARASLERKIGSQLEQATLDDLLI
PSYSYLNETLYDVACVERILGYFLNGLEERSTVRIQGEEENISVRSTALMLVGKLIDGYL
SEIASDNNLLPEKFCELAVALPDQARLFDDGLYRAVDVYLKAHPWISEAEREQICGVMDC
QKLTLEACTHAAQNERLPLRAVVQVLFFEQLQLRQAIAGTLMVADVNPEEIPRLSIMDGR
EGEGEGGEQEETTGVVGMARAQEGSSTWRKTVRENQVLRLDMDSMRTRVQELERECSSMK
KVIQKIDKVGKHGSNGGREGGGGGWRKKLGCKFKTQVCDSHEPTVVEAKKGRGHRHQHQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400026008
Transcript Infomation

pacid=37429116 locus=PGSC0003DMG400010034 ID=PGSC0003DMT400026008.v4.03 annot-version=v4.03
Sequence

ATGCCGCACTCTGACCACCCCACCACCAAAGGCCAAGCATGGTTTTGTACTACAGGATTA
CCCAGTGATATCATCATCGAAGTTGAAGATATGACCTTCCATCTTCACAAGTTTCCCCTG
ATGTCAAAAAGTAGAAAGCTTCATGAAATGATAACAGAGCAAGAGACAAATGCAAGTAGC
AGTAAAATCCAAAAACCGGCTGAACGAGACAACGATTGTGATGGTGATGAGGAGATTGAA
GAAGAAGAGGATAATGAGGAGGACCAGCAATACTGTATTTCGTTCCCTGATTTCCCGGGC
GGTTCAGAGACATTTGAGACGGCTGCCAAGTTCTGTTATGGTGTGAAAATCGAGTTGTCT
GCATCGAACGTTGCTCCACTGCGCTGTGCGGGTGAGTACCTGGAGATGACTGAAGAGTAC
TCCGAGGATAACCTCATTTCCAAGACGGAGAGGTTTCTTTCACAGACAGTGCTAAAGAGT
ATTAAGGACTCCATTAGAACCCTAAACTCGTGCAAGAACATGTTGCCGTTAGCAGAAACA
CTCGGCATTGTTCAGAGATGCATTGATGCCGTTGCTGTTAGAGCTTCAACTGCTGATCCG
TCTCTCTTTGGCTGGCCGGTGAATGATCACGGCCCTGGAAATGGAGTTGAAGCAAATACT
CGCCGTAAAGGTGCCAACAGAGGAGGTGGTATGGATTCGTGGTTCGAAGAGCTAGGGTAC
TTGAGCTTGCCTTTGTTCAAGCGTTTGATTTCTGCAATGAAAAGTAGAGATTTGAGTTCA
GAAGTTATCGAGAGCTGTCTAATGTATTATGCGAAGAAGTACATTCCAGGAATTTCACGC
TCAAGTAGGAATGCATCTTCGTCTTCGATACCATCGGAGAACGAACAGAGAGAGCTTTTG
GAGACTATAATTACTAACCTTCCTGAAGAAACTAGCTCAAGAACTTCAACAACCACAAGG
ATTCTCTTCGGTTTATTGAGAACAGCGAACATACTAAATGCTTCGGAAGCTGCTCGAGCT
TCACTGGAGAGGAAAATCGGATCTCAACTGGAGCAAGCCACATTAGACGATCTTCTCATT
CCGAGCTACTCTTATCTGAATGAAACGTTATATGATGTCGCTTGTGTGGAAAGAATATTA
GGATATTTTTTAAACGGATTGGAAGAGAGATCTACCGTTAGAATTCAAGGCGAAGAAGAG
AACATCAGTGTCAGATCCACGGCATTAATGTTAGTCGGAAAGTTAATCGACGGTTACTTA
TCAGAAATAGCTTCTGATAATAATTTATTACCGGAAAAATTCTGCGAATTAGCTGTTGCA
TTGCCGGACCAAGCAAGACTCTTTGATGATGGCCTTTACAGAGCTGTCGATGTGTATCTC
AAGGCGCATCCATGGATATCGGAAGCGGAGAGGGAGCAAATATGCGGTGTAATGGATTGT
CAAAAGCTAACATTAGAGGCGTGTACACACGCAGCTCAGAATGAACGGCTTCCACTTAGA
GCCGTAGTTCAGGTACTATTCTTCGAACAACTCCAACTCCGGCAAGCAATTGCCGGAACT
CTTATGGTCGCCGATGTGAATCCAGAAGAAATCCCGCGGCTGTCAATCATGGACGGCAGG
GAAGGGGAGGGTGAAGGTGGAGAGCAAGAGGAAACGACAGGAGTAGTTGGAATGGCACGT
GCACAGGAAGGGAGTAGCACGTGGAGGAAAACAGTGAGGGAGAATCAAGTGCTACGCTTG
GATATGGATAGCATGAGGACGCGAGTACAAGAACTGGAACGCGAATGCTCCTCAATGAAG
AAAGTAATCCAGAAGATAGATAAGGTAGGCAAACACGGCAGCAACGGCGGCAGAGAAGGA
GGAGGAGGAGGGTGGAGAAAGAAGTTGGGATGTAAATTCAAGACGCAAGTGTGTGACTCG
CATGAGCCAACGGTTGTGGAGGCCAAGAAAGGACGGGGCCATCGTCATCAACATCAATAA