Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400026001
CDS Infomation

pacid=37426285 polypeptide=PGSC0003DMP400017741 locus=PGSC0003DMG400010032 ID=PGSC0003DMT400026001.v4.03 annot-version=v4.03
Sequence

ATGGGTTTTCATCAGATCATTATTATTAGATTCGTTTTCTCAATTTTATTGGGTTGGTTA
TCATCGTCAGTTGAGGCTACTAATTCAACTAAGTGCAATCAGTACTGTGGAGCTGCTGGT
TCTAATGGCCCGCGTGTTTCTTATCCATTTGGGTTCTCAGATGGTTGTGGGATTCGTTTA
GATTGTACTGAAAGTAGTGGAGAAATCAGAATTGGGGAATATATAATACAGAATGTGACT
TCAGAGACTCTGATGGTGAACTTCCCGATGAATTGCAGCCGTCCGATTGAGGATCTACAG
GAATTTGATCGAACCAACTTTGGTATGACTTGGAGAAATGGACTGCTTCTACACAATTGT
AAAGTCCCGAGGAGTGAGTGTACCATACCATCGGAAATTTTAAGCACGCGTTTGAATATA
CAGTCATGTGATTCGAAGAAAGAGAATGTCAGTTGTTATTCAGAGGCGAGGGCGGATTAT
TTAGATTACCAGAAACTGAAGAATACAGGGTGTGGAACTGTGGTTTCGTCCATCTTGATT
GGTATGGATAATGATACAATGAAGAGTTCTGCCATGTTCCTGGAGTTTCAGACGATGGAA
TTAGCGTGGGGATTGGTAGGGGATTGTGCATGTCATGACGATGCAAATTGTACCATCGTT
TCTCTTCCGGGGAACCGAAAAGGTTTCCGATGCCGGTGTAAAGATGGATTCGTCGGTGAT
GGCTTCCGCGACGGTGATGGGTGCCGTAAAGTTTCAAGATGCAATCCTTCCAGATACCTC
TCTGGCCGATGTGGTGGAACTACCAGAATTGGTGTGCTCGTTGGAGGGATTATTGCTGGA
GCTGGTTTAATGGCTGCTTTAGCTGTTCTTTGCTACTGCATTCGAAGACGTTCTACATCT
CTCAAGAAAAGAATGAGCGCAAGACGCCTTCTCTCTGAAGCTGCAGGCAGCAACAGTGTT
CATGTATTTCAATACAAAGAAATTGAGAGGGCAACAAATAGTTTCTCTGAGAAACAGAGG
CTGGGAATAGGGGCTTATGGCACAGTTTATGCTGGAAAGCTCCACAGTGATGAATGGGTT
GCAATTAAGAAACTAAGACACCGAGATCCGGATGGTGTTGAACAAGTGATGAATGAGGTT
AAGCTTTTGTCTTCTGTAAGTCATCCAAACTTAGTCCGCCTCTTAGGTTGTTGTATAGAA
AATGGTGAACAGATTCTTGTTTATGAATTTATGCCCAACGGAACTGTAGCTCAGCATCTA
CAGAGAGAAAGGGGTTCAGGACTTCCATGGACAATACGTCTCACTATCGCAACAGAAACT
GCTCATGCAATTGCTCACCTTCACTCAGCAATGAATCCACCAATATACCACAGGGATATC
AAATCAAGTAACATACTATTGGATTACAACTTCAACTCAAAGGTTGCAGACTTTGGTCTT
TCCAGATTTGGCATGACAGATGATTCCCACATTTCTACAGCACCACAAGGTACTCCAGGT
TATGTGGATCCTCAGTACCATCAGAATTACCATCTTTCCGATAAGAGTGATGTGTACAGC
TTCGGGGTGGTTCTTGTAGAAATCATCACAGCAATGAAAGTGGTTGATTTCTCTAGATCA
CACAGTGAGATTAATTTGGCTGCACTGGCAATAGACAGAATAGGTAAGGGTCGTGTGGAT
GAGATTATCGATCCATTTCTCGAGCCACACAGAGATGCATGGACTCTATCATCAGTTCAT
AGAGTTGCAGAGCTTGCTTTCAGATGCCTTGCATTTCACAAGGATATGAGGCCTTCAATG
ACAGAAGTGGCAGATGAGCTAGAACAGGTCAGGCTCAGCAGTTGGGCATCATTGGAGGAC
AATGTATGCATGACATCATCAGTGAATTCCTCTTGCTCATCTCCCCGTAGTATGAGTGAG
ACATCTTTTCGTAGTACAACAACTAAGAAAGGAGTAGGGAGTAGGAGGTTGATTGTTCCG
CAGAAGATAGCGAATTCACTGGCAATCATGGAGGAAATAAAAGACAGTTCCCCTGTTTCT
GTGCAGGATCCTTGGTTTAGTGAAGAGAGTCCCCCTTCAACTAACCGATTATTAGGTAAT
TCTGGTCGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400017741
PEP Infomation

pacid=37426285 transcript=PGSC0003DMT400026001 locus=PGSC0003DMG400010032 ID=PGSC0003DMT400026001.v4.03 annot-version=v4.03
Sequence

MGFHQIIIIRFVFSILLGWLSSSVEATNSTKCNQYCGAAGSNGPRVSYPFGFSDGCGIRL
DCTESSGEIRIGEYIIQNVTSETLMVNFPMNCSRPIEDLQEFDRTNFGMTWRNGLLLHNC
KVPRSECTIPSEILSTRLNIQSCDSKKENVSCYSEARADYLDYQKLKNTGCGTVVSSILI
GMDNDTMKSSAMFLEFQTMELAWGLVGDCACHDDANCTIVSLPGNRKGFRCRCKDGFVGD
GFRDGDGCRKVSRCNPSRYLSGRCGGTTRIGVLVGGIIAGAGLMAALAVLCYCIRRRSTS
LKKRMSARRLLSEAAGSNSVHVFQYKEIERATNSFSEKQRLGIGAYGTVYAGKLHSDEWV
AIKKLRHRDPDGVEQVMNEVKLLSSVSHPNLVRLLGCCIENGEQILVYEFMPNGTVAQHL
QRERGSGLPWTIRLTIATETAHAIAHLHSAMNPPIYHRDIKSSNILLDYNFNSKVADFGL
SRFGMTDDSHISTAPQGTPGYVDPQYHQNYHLSDKSDVYSFGVVLVEIITAMKVVDFSRS
HSEINLAALAIDRIGKGRVDEIIDPFLEPHRDAWTLSSVHRVAELAFRCLAFHKDMRPSM
TEVADELEQVRLSSWASLEDNVCMTSSVNSSCSSPRSMSETSFRSTTTKKGVGSRRLIVP
QKIANSLAIMEEIKDSSPVSVQDPWFSEESPPSTNRLLGNSGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400026001
Transcript Infomation

pacid=37426285 locus=PGSC0003DMG400010032 ID=PGSC0003DMT400026001.v4.03 annot-version=v4.03
Sequence

ATGGGTTTTCATCAGATCATTATTATTAGATTCGTTTTCTCAATTTTATTGGGTTGGTTA
TCATCGTCAGTTGAGGCTACTAATTCAACTAAGTGCAATCAGTACTGTGGAGCTGCTGGT
TCTAATGGCCCGCGTGTTTCTTATCCATTTGGGTTCTCAGATGGTTGTGGGATTCGTTTA
GATTGTACTGAAAGTAGTGGAGAAATCAGAATTGGGGAATATATAATACAGAATGTGACT
TCAGAGACTCTGATGGTGAACTTCCCGATGAATTGCAGCCGTCCGATTGAGGATCTACAG
GAATTTGATCGAACCAACTTTGGTATGACTTGGAGAAATGGACTGCTTCTACACAATTGT
AAAGTCCCGAGGAGTGAGTGTACCATACCATCGGAAATTTTAAGCACGCGTTTGAATATA
CAGTCATGTGATTCGAAGAAAGAGAATGTCAGTTGTTATTCAGAGGCGAGGGCGGATTAT
TTAGATTACCAGAAACTGAAGAATACAGGGTGTGGAACTGTGGTTTCGTCCATCTTGATT
GGTATGGATAATGATACAATGAAGAGTTCTGCCATGTTCCTGGAGTTTCAGACGATGGAA
TTAGCGTGGGGATTGGTAGGGGATTGTGCATGTCATGACGATGCAAATTGTACCATCGTT
TCTCTTCCGGGGAACCGAAAAGGTTTCCGATGCCGGTGTAAAGATGGATTCGTCGGTGAT
GGCTTCCGCGACGGTGATGGGTGCCGTAAAGTTTCAAGATGCAATCCTTCCAGATACCTC
TCTGGCCGATGTGGTGGAACTACCAGAATTGGTGTGCTCGTTGGAGGGATTATTGCTGGA
GCTGGTTTAATGGCTGCTTTAGCTGTTCTTTGCTACTGCATTCGAAGACGTTCTACATCT
CTCAAGAAAAGAATGAGCGCAAGACGCCTTCTCTCTGAAGCTGCAGGCAGCAACAGTGTT
CATGTATTTCAATACAAAGAAATTGAGAGGGCAACAAATAGTTTCTCTGAGAAACAGAGG
CTGGGAATAGGGGCTTATGGCACAGTTTATGCTGGAAAGCTCCACAGTGATGAATGGGTT
GCAATTAAGAAACTAAGACACCGAGATCCGGATGGTGTTGAACAAGTGATGAATGAGGTT
AAGCTTTTGTCTTCTGTAAGTCATCCAAACTTAGTCCGCCTCTTAGGTTGTTGTATAGAA
AATGGTGAACAGATTCTTGTTTATGAATTTATGCCCAACGGAACTGTAGCTCAGCATCTA
CAGAGAGAAAGGGGTTCAGGACTTCCATGGACAATACGTCTCACTATCGCAACAGAAACT
GCTCATGCAATTGCTCACCTTCACTCAGCAATGAATCCACCAATATACCACAGGGATATC
AAATCAAGTAACATACTATTGGATTACAACTTCAACTCAAAGGTTGCAGACTTTGGTCTT
TCCAGATTTGGCATGACAGATGATTCCCACATTTCTACAGCACCACAAGGTACTCCAGGT
TATGTGGATCCTCAGTACCATCAGAATTACCATCTTTCCGATAAGAGTGATGTGTACAGC
TTCGGGGTGGTTCTTGTAGAAATCATCACAGCAATGAAAGTGGTTGATTTCTCTAGATCA
CACAGTGAGATTAATTTGGCTGCACTGGCAATAGACAGAATAGGTAAGGGTCGTGTGGAT
GAGATTATCGATCCATTTCTCGAGCCACACAGAGATGCATGGACTCTATCATCAGTTCAT
AGAGTTGCAGAGCTTGCTTTCAGATGCCTTGCATTTCACAAGGATATGAGGCCTTCAATG
ACAGAAGTGGCAGATGAGCTAGAACAGGTCAGGCTCAGCAGTTGGGCATCATTGGAGGAC
AATGTATGCATGACATCATCAGTGAATTCCTCTTGCTCATCTCCCCGTAGTATGAGTGAG
ACATCTTTTCGTAGTACAACAACTAAGAAAGGAGTAGGGAGTAGGAGGTTGATTGTTCCG
CAGAAGATAGCGAATTCACTGGCAATCATGGAGGAAATAAAAGACAGTTCCCCTGTTTCT
GTGCAGGATCCTTGGTTTAGTGAAGAGAGTCCCCCTTCAACTAACCGATTATTAGGTAAT
TCTGGTCGATGA