Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025985
CDS Infomation

pacid=37424973 polypeptide=PGSC0003DMP400017727 locus=PGSC0003DMG400010028 ID=PGSC0003DMT400025985.v4.03 annot-version=v4.03
Sequence

ATGGGTGCTCGTGGGAGGAAAAGAGCTGCTCCGGTGAACATCGACGATGTCGCCGGCGAT
ACCCAGGAAAAATCTGAGTACGAACAGTTGAGGGAAAAAAGAATCAAGGAAAATCTTGAG
AGGATGCAAAAGTTGGGGATTTTTGACATATCACTCAAACTCAAGCCTGTTAGGACACCC
ATCGTTCGCAAAACCCCTCAGCGTCTCTCTCCTGTGCAGCGTTCTGGACCCACGCGCCGG
TCCTCCAGGCTGCAGAGTGCGACACCAATCAGCTATTCAGAGGTGCATCCGTCGAAGATT
GATAACTCCTTGGATGGTAAGCATCATTTGTTGAGGGAGGAAGGGGCAAAGCCAGAGATT
TACACGGAAGAACATGAGAAATTGTTGGGTACCACTGATTTGAGCTGGACTTTTTTTGTG
GATGGATATGGAAATGATGGGAAGAGAATCTATGATCCAGTCAAAGGAAAAACTTGTCAT
CAGTGCCGACAGAAAACTCTTGGTCATCGTACTCATTGTAGCAATTGCCAAATTGTTCAA
GGACAATTCTGTGGAGATTGCTTGTATATGAGATACGGAGAACATGTACTCGAAGCGAAC
AAGAATCCGAACTGGCTTTGCCCTGTTTGTCGAGGAATATGCAACTGCAGCTTGTGCCGG
CAAGCAAAAGGTTGGGCTCCTACTGGTGCTCTCTATAGGAAGATTGCTAAACTGGGTTAT
AAGTCAGTTGCACATTATCTTATTCAAACCCATCGAGCTACTGTCAGTACCGAGAACAAC
TTGACACCATTCTCTGCAAAAAGATCACTACCTTTCTCAGATATGGAAGGTACAACGAAA
GATGAGGGACTTTGTGAGGTGAAACCAGTGGCGTATGATGCCAATGAACCCAATTTAGCT
CCAGAAAGTAGTACAGAGCCTTTGCTGAAGTCCATTGTTGTTGAACCCTTATTACTACTG
AAACATGACCCTGAAAACAGTGGTACAGATCTTGTGCTCTTAAGCGATAATGTAGGAAAC
TTCTCAACAGACAACAAATCAGGAAATGAAAATGCTGTGCTGGTAGGCAACTCATTGACT
TCTCAAACAGAGGCGAAACCAGTGGACTATGATGGCCATGAGCCCAACTTAGCACCGGAA
AGTAGCACAGTGCCCTTGCTGAAGTCCATTGTTGAACCCTTGTTGCTAATGAAACATGGC
TCTGAAAACAGTGATAAAAATCGTGTGCTCTCATGCGACAATGCAGGAAATATCTCAGCA
GACAACAAATCAGGAAATGAAAATGTCGTGCTGGTAGGCAACTCATTGACTTCTCAAACA
GAGGTGAAACCAACCTTAGCACCAGAAAGTAGCACAGAGCCCTTGCTGAAGTCCATTGCT
GAACCCTTGTTACTACTGAAACATGACTCTGAAAGCAGTGGTAAAAATCTTGTGCTCTCA
TGCGACAATGCAGGAAACTTCTCAGCAGACAACAAATCAGGAAATGAAAATGCCGTGCTG
GTAGGCAGTGCATTGACTTCAAGTACGCCCGTGCTTACTGAATTGAATGATGTCTTCAAA
GGCGAGTCACAACTTGGTTATGAATTTGACGTTGGAAAAATGCAATCAAAAGAAGAAAAA
GAGGACAGCACTTGTGTCTTGGATGACAAAAACTGTCATGAGGTTGCACCAGAAGTAAGT
TCAAAGTCGAAGAAGAAGCCTTGTCGAGCTGCTGCACAAGTCTTTGATACTATTGCTGGA
AGATTAAGGCAGAGACGTGGAAGAAGCAATGTGGAAGCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400017727
PEP Infomation

pacid=37424973 transcript=PGSC0003DMT400025985 locus=PGSC0003DMG400010028 ID=PGSC0003DMT400025985.v4.03 annot-version=v4.03
Sequence

MGARGRKRAAPVNIDDVAGDTQEKSEYEQLREKRIKENLERMQKLGIFDISLKLKPVRTP
IVRKTPQRLSPVQRSGPTRRSSRLQSATPISYSEVHPSKIDNSLDGKHHLLREEGAKPEI
YTEEHEKLLGTTDLSWTFFVDGYGNDGKRIYDPVKGKTCHQCRQKTLGHRTHCSNCQIVQ
GQFCGDCLYMRYGEHVLEANKNPNWLCPVCRGICNCSLCRQAKGWAPTGALYRKIAKLGY
KSVAHYLIQTHRATVSTENNLTPFSAKRSLPFSDMEGTTKDEGLCEVKPVAYDANEPNLA
PESSTEPLLKSIVVEPLLLLKHDPENSGTDLVLLSDNVGNFSTDNKSGNENAVLVGNSLT
SQTEAKPVDYDGHEPNLAPESSTVPLLKSIVEPLLLMKHGSENSDKNRVLSCDNAGNISA
DNKSGNENVVLVGNSLTSQTEVKPTLAPESSTEPLLKSIAEPLLLLKHDSESSGKNLVLS
CDNAGNFSADNKSGNENAVLVGSALTSSTPVLTELNDVFKGESQLGYEFDVGKMQSKEEK
EDSTCVLDDKNCHEVAPEVSSKSKKKPCRAAAQVFDTIAGRLRQRRGRSNVEA*

Transcript Sequence

Transcript ID

PGSC0003DMT400025985
Transcript Infomation

pacid=37424973 locus=PGSC0003DMG400010028 ID=PGSC0003DMT400025985.v4.03 annot-version=v4.03
Sequence

ATGGGTGCTCGTGGGAGGAAAAGAGCTGCTCCGGTGAACATCGACGATGTCGCCGGCGAT
ACCCAGGAAAAATCTGAGTACGAACAGTTGAGGGAAAAAAGAATCAAGGAAAATCTTGAG
AGGATGCAAAAGTTGGGGATTTTTGACATATCACTCAAACTCAAGCCTGTTAGGACACCC
ATCGTTCGCAAAACCCCTCAGCGTCTCTCTCCTGTGCAGCGTTCTGGACCCACGCGCCGG
TCCTCCAGGCTGCAGAGTGCGACACCAATCAGCTATTCAGAGGTGCATCCGTCGAAGATT
GATAACTCCTTGGATGGTAAGCATCATTTGTTGAGGGAGGAAGGGGCAAAGCCAGAGATT
TACACGGAAGAACATGAGAAATTGTTGGGTACCACTGATTTGAGCTGGACTTTTTTTGTG
GATGGATATGGAAATGATGGGAAGAGAATCTATGATCCAGTCAAAGGAAAAACTTGTCAT
CAGTGCCGACAGAAAACTCTTGGTCATCGTACTCATTGTAGCAATTGCCAAATTGTTCAA
GGACAATTCTGTGGAGATTGCTTGTATATGAGATACGGAGAACATGTACTCGAAGCGAAC
AAGAATCCGAACTGGCTTTGCCCTGTTTGTCGAGGAATATGCAACTGCAGCTTGTGCCGG
CAAGCAAAAGGTTGGGCTCCTACTGGTGCTCTCTATAGGAAGATTGCTAAACTGGGTTAT
AAGTCAGTTGCACATTATCTTATTCAAACCCATCGAGCTACTGTCAGTACCGAGAACAAC
TTGACACCATTCTCTGCAAAAAGATCACTACCTTTCTCAGATATGGAAGGTACAACGAAA
GATGAGGGACTTTGTGAGGTGAAACCAGTGGCGTATGATGCCAATGAACCCAATTTAGCT
CCAGAAAGTAGTACAGAGCCTTTGCTGAAGTCCATTGTTGTTGAACCCTTATTACTACTG
AAACATGACCCTGAAAACAGTGGTACAGATCTTGTGCTCTTAAGCGATAATGTAGGAAAC
TTCTCAACAGACAACAAATCAGGAAATGAAAATGCTGTGCTGGTAGGCAACTCATTGACT
TCTCAAACAGAGGCGAAACCAGTGGACTATGATGGCCATGAGCCCAACTTAGCACCGGAA
AGTAGCACAGTGCCCTTGCTGAAGTCCATTGTTGAACCCTTGTTGCTAATGAAACATGGC
TCTGAAAACAGTGATAAAAATCGTGTGCTCTCATGCGACAATGCAGGAAATATCTCAGCA
GACAACAAATCAGGAAATGAAAATGTCGTGCTGGTAGGCAACTCATTGACTTCTCAAACA
GAGGTGAAACCAACCTTAGCACCAGAAAGTAGCACAGAGCCCTTGCTGAAGTCCATTGCT
GAACCCTTGTTACTACTGAAACATGACTCTGAAAGCAGTGGTAAAAATCTTGTGCTCTCA
TGCGACAATGCAGGAAACTTCTCAGCAGACAACAAATCAGGAAATGAAAATGCCGTGCTG
GTAGGCAGTGCATTGACTTCAAGTACGCCCGTGCTTACTGAATTGAATGATGTCTTCAAA
GGCGAGTCACAACTTGGTTATGAATTTGACGTTGGAAAAATGCAATCAAAAGAAGAAAAA
GAGGACAGCACTTGTGTCTTGGATGACAAAAACTGTCATGAGGTTGCACCAGAAGTAAGT
TCAAAGTCGAAGAAGAAGCCTTGTCGAGCTGCTGCACAAGTCTTTGATACTATTGCTGGA
AGATTAAGGCAGAGACGTGGAAGAAGCAATGTGGAAGCATAA