Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025974
CDS Infomation

pacid=37428955 polypeptide=PGSC0003DMP400017719 locus=PGSC0003DMG400010025 ID=PGSC0003DMT400025974.v4.03 annot-version=v4.03
Sequence

ATGGGGAATGTTGCACTTTTTCATTTGATTTGTGGAATCTTCATATTTTGGAGTGTTTCT
GTGGTGAAAGCAGAGGATACTTATAAATATTTCACATGGACTGCTACTTATGGAACTCTT
TCTCCTCTTGGTGTTCCTCAACAGGTGATCCTCATTAATGGACAATTTCCTGGTCCAAGA
CTCGACCTCGTCACAAATGACAATGTAATCCTCAATCTGATTAATAAGTTGGATGAGCCT
CTTCTGTTGACATGGAATGGAATCAAACAAAGAAAGAATTCTTGGCAAGATGGAGTTTTG
GGAACAAATTGTCCCATTCCTATAAATTCAAATTACACTTACAAGTTCCAAACAAAAGAC
CAGATTGGAAGTTACACATACTTCCCTTCAACTCAATTGCATAGAGCTGTTGGAGGTTTC
GGAGCACTTAACGTGTATGCGAGATCTGTGATCTCCGTTCCATATGCTAAACCTGCTGGA
GATTTCAGTTTACTTATTGGTGATTGGTACAAGAGCAGCCATAAGGTATTGAGGCAAATA
TTGGACTCAGGGAGGTCTCTTCCTTATCCAAATGGCCTCCTAATAAATGGACAGAAGCAG
TCTACCTTCAGTGGTGATCAAGGAAAGACATATATGTTCAGGATTTCAAATGTAGGCTTG
AAAAATTCCATCAACTTCAGAATTCAGGGCCATAAGATGAGGGTTGTCGAGGTTGAAGGA
TCCCACGTCTTGCAGAACTTCTATGATTCTCTTGATGTCCATGTTGGTCAATCTATGTCT
GTCCTTGTCACGTTGGATCAGCCTCCGAAGGACTACTACATTGTTGCTTCTACAAGGTTC
TCCAGGATAAATTTTACTGCCACTTCAGTTCTCCACTACACTAATTCTCAGACACCCGTT
TCTGGACCCATGCCACCTGCTCCAGCTGGCCAAATGCATTGGTCTATGTTGCAAGCCAGA
ACATTTAGGTGGAATCTGACATCAAATGCAGCTAGGCCAAATCCTCAGGGTTCATTCCAT
TATGGAAAAATTACAATATCAAGGACTTTTGTTATGGCTAATTCAGCACCTCTTATCAAT
GGAAAGCTGAGATATGCTGTCAATAGTGTCTCTTATGTTAATCCTGATACTCCACTAAAG
CTTGCTGATCACTTCAACATCCCCGGAGTGTTCAACTTGAACTCCATTCAAGCTTATCCC
TCTGGTGGTTCGCCTTACTTAGGCACAGCTGTATTTCCAACTTCTCACCATGATTTCATC
GAAATTGTTTTCCAAAACGATGAGGCCACCATGCAATCCTGGCATCTTGATGGCTATGAT
TTCTGGGTTGTAGGTTTCGGATCTGACAAATGGACACAAGCAAGTAGAAATAAGTACAAT
CTTGTTGATGCTCTGACTAGACATACTACACAGGTATATCCCAAATCCTGGACTGCCATA
TTGGTGTCCTTGGACAACCAAGGAATGTGGAATTTGAGATCAGCTATGTGGGATAGACAA
TATCTTGGACAACAAGTGTACCTCAGAGTGTACGACCCAACCCCAAGTCTAGCTAATGAA
TATGACATACCAACTAATGCTCTTCTTTGTGGCAAAGCTGCTGGTAGACATACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017719
PEP Infomation

pacid=37428955 transcript=PGSC0003DMT400025974 locus=PGSC0003DMG400010025 ID=PGSC0003DMT400025974.v4.03 annot-version=v4.03
Sequence

MGNVALFHLICGIFIFWSVSVVKAEDTYKYFTWTATYGTLSPLGVPQQVILINGQFPGPR
LDLVTNDNVILNLINKLDEPLLLTWNGIKQRKNSWQDGVLGTNCPIPINSNYTYKFQTKD
QIGSYTYFPSTQLHRAVGGFGALNVYARSVISVPYAKPAGDFSLLIGDWYKSSHKVLRQI
LDSGRSLPYPNGLLINGQKQSTFSGDQGKTYMFRISNVGLKNSINFRIQGHKMRVVEVEG
SHVLQNFYDSLDVHVGQSMSVLVTLDQPPKDYYIVASTRFSRINFTATSVLHYTNSQTPV
SGPMPPAPAGQMHWSMLQARTFRWNLTSNAARPNPQGSFHYGKITISRTFVMANSAPLIN
GKLRYAVNSVSYVNPDTPLKLADHFNIPGVFNLNSIQAYPSGGSPYLGTAVFPTSHHDFI
EIVFQNDEATMQSWHLDGYDFWVVGFGSDKWTQASRNKYNLVDALTRHTTQVYPKSWTAI
LVSLDNQGMWNLRSAMWDRQYLGQQVYLRVYDPTPSLANEYDIPTNALLCGKAAGRHT*

Transcript Sequence

Transcript ID

PGSC0003DMT400025974
Transcript Infomation

pacid=37428955 locus=PGSC0003DMG400010025 ID=PGSC0003DMT400025974.v4.03 annot-version=v4.03
Sequence

ATGGGGAATGTTGCACTTTTTCATTTGATTTGTGGAATCTTCATATTTTGGAGTGTTTCT
GTGGTGAAAGCAGAGGATACTTATAAATATTTCACATGGACTGCTACTTATGGAACTCTT
TCTCCTCTTGGTGTTCCTCAACAGGTGATCCTCATTAATGGACAATTTCCTGGTCCAAGA
CTCGACCTCGTCACAAATGACAATGTAATCCTCAATCTGATTAATAAGTTGGATGAGCCT
CTTCTGTTGACATGGAATGGAATCAAACAAAGAAAGAATTCTTGGCAAGATGGAGTTTTG
GGAACAAATTGTCCCATTCCTATAAATTCAAATTACACTTACAAGTTCCAAACAAAAGAC
CAGATTGGAAGTTACACATACTTCCCTTCAACTCAATTGCATAGAGCTGTTGGAGGTTTC
GGAGCACTTAACGTGTATGCGAGATCTGTGATCTCCGTTCCATATGCTAAACCTGCTGGA
GATTTCAGTTTACTTATTGGTGATTGGTACAAGAGCAGCCATAAGGTATTGAGGCAAATA
TTGGACTCAGGGAGGTCTCTTCCTTATCCAAATGGCCTCCTAATAAATGGACAGAAGCAG
TCTACCTTCAGTGGTGATCAAGGAAAGACATATATGTTCAGGATTTCAAATGTAGGCTTG
AAAAATTCCATCAACTTCAGAATTCAGGGCCATAAGATGAGGGTTGTCGAGGTTGAAGGA
TCCCACGTCTTGCAGAACTTCTATGATTCTCTTGATGTCCATGTTGGTCAATCTATGTCT
GTCCTTGTCACGTTGGATCAGCCTCCGAAGGACTACTACATTGTTGCTTCTACAAGGTTC
TCCAGGATAAATTTTACTGCCACTTCAGTTCTCCACTACACTAATTCTCAGACACCCGTT
TCTGGACCCATGCCACCTGCTCCAGCTGGCCAAATGCATTGGTCTATGTTGCAAGCCAGA
ACATTTAGGTGGAATCTGACATCAAATGCAGCTAGGCCAAATCCTCAGGGTTCATTCCAT
TATGGAAAAATTACAATATCAAGGACTTTTGTTATGGCTAATTCAGCACCTCTTATCAAT
GGAAAGCTGAGATATGCTGTCAATAGTGTCTCTTATGTTAATCCTGATACTCCACTAAAG
CTTGCTGATCACTTCAACATCCCCGGAGTGTTCAACTTGAACTCCATTCAAGCTTATCCC
TCTGGTGGTTCGCCTTACTTAGGCACAGCTGTATTTCCAACTTCTCACCATGATTTCATC
GAAATTGTTTTCCAAAACGATGAGGCCACCATGCAATCCTGGCATCTTGATGGCTATGAT
TTCTGGGTTGTAGGTTTCGGATCTGACAAATGGACACAAGCAAGTAGAAATAAGTACAAT
CTTGTTGATGCTCTGACTAGACATACTACACAGGTATATCCCAAATCCTGGACTGCCATA
TTGGTGTCCTTGGACAACCAAGGAATGTGGAATTTGAGATCAGCTATGTGGGATAGACAA
TATCTTGGACAACAAGTGTACCTCAGAGTGTACGACCCAACCCCAAGTCTAGCTAATGAA
TATGACATACCAACTAATGCTCTTCTTTGTGGCAAAGCTGCTGGTAGACATACTTAA