Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025933
CDS Infomation

pacid=37428522 polypeptide=PGSC0003DMP400017699 locus=PGSC0003DMG400010017 ID=PGSC0003DMT400025933.v4.03 annot-version=v4.03
Sequence

ATGAACAATAGATTCCGACCATCTCTACACCCCAAAAAAGTTCCTTTGAATCCTCAAAAG
GAGAAGAAGATGGAAATACAGCAAAACAAATTCTTGTCTGTAGAGAAGCCCAGAGTTAAT
CGGCGTCAAGCTGCTAAAGAGAGAAAATTAGCCTTACTTCAAGATGTTGATAAGCTAAAG
AAGAAGCTGAGGCATGAAGAAAATATCCACAGAGCATTGGAAAGAGCTTTTTACAGACCT
TTAGGAACTCTACCTCGCCTTCCTCCTTATCTTCCCAAATATACATTAGAGCTTCTTGCT
GAAGTAGCTGTTTTGGAAGAAGAAGTGGTCCGGCTTGAGGAACAGGTTGTTAATTATAGA
CAAGGTCTCTATCAAGAAGCAGTTTCCACATGCTCAAGGCTAAATACGGACGATAATCAT
TTGTCTGATTCATGCCCTCAGAGACATGGTAAAATTTCTAAGCAAAGACATTCAAGATCA
TTTTCCATGAGTGAAGTCAATCTCGGATCATCCGTGCCACAGTCTTCTCTTTCTCTAGAT
AGGAGTGCTTCAAGTAGAAAGTTGTTTTTAAAAGAATCAGTGTTTGGTAGCTCGAGAATT
AGCTATGATGTAACATCAAATAGCAGACAAGCTGTCATGAAGAATTGCAATGACTCATTG
ATAGATGGCCTACGAAAAGAGAATCACTCGGCTGATAGTTGTACTAAGGATAAACCATCT
CCACAGAAGCAAGTCAGCACGATAAAAACTTTGTTAGTAAGGCCTCCTGTTAAGCCTGAA
TCAATCAGCAAAATAGCAGATGTTAGGGTTCAGTGCAGGGTTGTAGAACAAGCACAAGAG
AGTTATTTAGCTTCTTCAGATGAACGGGAATTGGAAGCTGAAAGCACAGAAAACAAAATA
TCTGAAGACATTTTAAAGTGCTTGTCTAGCATCTTATTAAGGTTGAGCACATCTAAAGGG
AAGATAGCTAATACAGAATCTTTTCGCTCTTTAGGAGCAAAAGTCTTGAATGAAAGGGAG
TTGCAAGATCCGTATTGCATCTGCTCAGAACAAAGGAAGCAAGATATTGGCGAATACGGA
TATATACTCACTATAGATGCTAACTCTGTTAATCTAAACCGGAAAATGAATGCTTCGTTT
CTGATTCACAGACTTAAGATTCTCCTTGGCAAGCTATCATCTGTGAAATTAGAGGGTTTG
ACTCATCAACAGAAGTTAGCATTCTGGATAAACACATACAATTCATGTGTGATGAATGCA
TTTATAGAGCATGGTATTCCAGAGACTGCTGAACAAGTTGTATCACTAATGCAAAAGGCA
ACAATTAATGTGGGAGGGCATTTTCTAAATGCAATCATGATTGAGCACTTTATCTTGAGG
CTACCGTACCACTTAAAATATACCTGTTCAAAGTCGGCAAAAGACACTGAGCTGAAGGTT
CGGAGCGTTTTTGGCTTGGAGTGGTCTGAACCTCTCGTCACATTTGCACTCTCCTGTGGA
AGTTGGTCCTCCCCTGCAGTGAGGGTTTACACTGCATCTCAAGTTGAAACTCAGTTGGAA
ACAGCAAAAAGAGATTACTTACAAGCAGCAGTTGGTATTTCAGCAACAAATAAGCTCATT
ATCCCCAAGTTGTTGGATTGGTATCTTCTTGATTTTGCAAAGGACTTGGATGCATTACTT
GATTGGGTGTGCCTCCAGCTACCAGATGAACTTAGAAATCAAACTATGAAATGCCTTGAG
AGACGAGGAAGAGAACCCCTTTCACAATTAGTTCAAGTAATGCCTTACAATTTCAGCTTC
AGGTACCTCATACACCAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400017699
PEP Infomation

pacid=37428522 transcript=PGSC0003DMT400025933 locus=PGSC0003DMG400010017 ID=PGSC0003DMT400025933.v4.03 annot-version=v4.03
Sequence

MNNRFRPSLHPKKVPLNPQKEKKMEIQQNKFLSVEKPRVNRRQAAKERKLALLQDVDKLK
KKLRHEENIHRALERAFYRPLGTLPRLPPYLPKYTLELLAEVAVLEEEVVRLEEQVVNYR
QGLYQEAVSTCSRLNTDDNHLSDSCPQRHGKISKQRHSRSFSMSEVNLGSSVPQSSLSLD
RSASSRKLFLKESVFGSSRISYDVTSNSRQAVMKNCNDSLIDGLRKENHSADSCTKDKPS
PQKQVSTIKTLLVRPPVKPESISKIADVRVQCRVVEQAQESYLASSDERELEAESTENKI
SEDILKCLSSILLRLSTSKGKIANTESFRSLGAKVLNERELQDPYCICSEQRKQDIGEYG
YILTIDANSVNLNRKMNASFLIHRLKILLGKLSSVKLEGLTHQQKLAFWINTYNSCVMNA
FIEHGIPETAEQVVSLMQKATINVGGHFLNAIMIEHFILRLPYHLKYTCSKSAKDTELKV
RSVFGLEWSEPLVTFALSCGSWSSPAVRVYTASQVETQLETAKRDYLQAAVGISATNKLI
IPKLLDWYLLDFAKDLDALLDWVCLQLPDELRNQTMKCLERRGREPLSQLVQVMPYNFSF
RYLIHQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400025933
Transcript Infomation

pacid=37428522 locus=PGSC0003DMG400010017 ID=PGSC0003DMT400025933.v4.03 annot-version=v4.03
Sequence

ATGAACAATAGATTCCGACCATCTCTACACCCCAAAAAAGTTCCTTTGAATCCTCAAAAG
GAGAAGAAGATGGAAATACAGCAAAACAAATTCTTGTCTGTAGAGAAGCCCAGAGTTAAT
CGGCGTCAAGCTGCTAAAGAGAGAAAATTAGCCTTACTTCAAGATGTTGATAAGCTAAAG
AAGAAGCTGAGGCATGAAGAAAATATCCACAGAGCATTGGAAAGAGCTTTTTACAGACCT
TTAGGAACTCTACCTCGCCTTCCTCCTTATCTTCCCAAATATACATTAGAGCTTCTTGCT
GAAGTAGCTGTTTTGGAAGAAGAAGTGGTCCGGCTTGAGGAACAGGTTGTTAATTATAGA
CAAGGTCTCTATCAAGAAGCAGTTTCCACATGCTCAAGGCTAAATACGGACGATAATCAT
TTGTCTGATTCATGCCCTCAGAGACATGGTAAAATTTCTAAGCAAAGACATTCAAGATCA
TTTTCCATGAGTGAAGTCAATCTCGGATCATCCGTGCCACAGTCTTCTCTTTCTCTAGAT
AGGAGTGCTTCAAGTAGAAAGTTGTTTTTAAAAGAATCAGTGTTTGGTAGCTCGAGAATT
AGCTATGATGTAACATCAAATAGCAGACAAGCTGTCATGAAGAATTGCAATGACTCATTG
ATAGATGGCCTACGAAAAGAGAATCACTCGGCTGATAGTTGTACTAAGGATAAACCATCT
CCACAGAAGCAAGTCAGCACGATAAAAACTTTGTTAGTAAGGCCTCCTGTTAAGCCTGAA
TCAATCAGCAAAATAGCAGATGTTAGGGTTCAGTGCAGGGTTGTAGAACAAGCACAAGAG
AGTTATTTAGCTTCTTCAGATGAACGGGAATTGGAAGCTGAAAGCACAGAAAACAAAATA
TCTGAAGACATTTTAAAGTGCTTGTCTAGCATCTTATTAAGGTTGAGCACATCTAAAGGG
AAGATAGCTAATACAGAATCTTTTCGCTCTTTAGGAGCAAAAGTCTTGAATGAAAGGGAG
TTGCAAGATCCGTATTGCATCTGCTCAGAACAAAGGAAGCAAGATATTGGCGAATACGGA
TATATACTCACTATAGATGCTAACTCTGTTAATCTAAACCGGAAAATGAATGCTTCGTTT
CTGATTCACAGACTTAAGATTCTCCTTGGCAAGCTATCATCTGTGAAATTAGAGGGTTTG
ACTCATCAACAGAAGTTAGCATTCTGGATAAACACATACAATTCATGTGTGATGAATGCA
TTTATAGAGCATGGTATTCCAGAGACTGCTGAACAAGTTGTATCACTAATGCAAAAGGCA
ACAATTAATGTGGGAGGGCATTTTCTAAATGCAATCATGATTGAGCACTTTATCTTGAGG
CTACCGTACCACTTAAAATATACCTGTTCAAAGTCGGCAAAAGACACTGAGCTGAAGGTT
CGGAGCGTTTTTGGCTTGGAGTGGTCTGAACCTCTCGTCACATTTGCACTCTCCTGTGGA
AGTTGGTCCTCCCCTGCAGTGAGGGTTTACACTGCATCTCAAGTTGAAACTCAGTTGGAA
ACAGCAAAAAGAGATTACTTACAAGCAGCAGTTGGTATTTCAGCAACAAATAAGCTCATT
ATCCCCAAGTTGTTGGATTGGTATCTTCTTGATTTTGCAAAGGACTTGGATGCATTACTT
GATTGGGTGTGCCTCCAGCTACCAGATGAACTTAGAAATCAAACTATGAAATGCCTTGAG
AGACGAGGAAGAGAACCCCTTTCACAATTAGTTCAAGTAATGCCTTACAATTTCAGCTTC
AGGTACCTCATACACCAATAA