Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025919
CDS Infomation

pacid=37472183 polypeptide=PGSC0003DMP400017688 locus=PGSC0003DMG400010007 ID=PGSC0003DMT400025919.v4.03 annot-version=v4.03
Sequence

ATGGATGCAGATTACGGCATACCTCGAGAACTCTCTGATTTGCAGAAGCTTCGGTCTCAC
TACCACCCTGAACTTCCTCCTTGTCTTCAGGGTACTACTGTCCGGGTAGAACTCCGTGAT
GCAACCACTGCAGCAGATCCCTCTGGTGAACACACAATTAAACGGTTCTTCCCACACACT
TATGGTCAACCATTAGCCCATTTTCTTAGGGCAACTGCCAAGGTCCCTGATGCTCAGATA
ATTACTGAACATCCTGCAATTAGGGTTGGGGTGCTATTTTGTGGTAGACAATCTCCTGGA
GGACACAATGTCATATGGGGTCTTCATGATGCTCTTAAGGTTCACAACCCCAAAAATATC
TTGCTTGGGTTTTTAGGTGGTTCTGAAGGTTTATTTGCACAAAAAACTCTAGAGATCACT
GATGATGTTCTTGCTACCTATAAGAATCAAGGTGGATATGACATGCTGGGACGGACAAAA
GATCAGATTAGAACGACTGAGCAAGTAAATGCTGCAATGGCTGCATGCAAAGCTTTGAAA
TTGGATGGCCTTGTCATCATTGGAGGAGTGACATCAAACACCGATGCTGCTCATCTGGCA
GAAAAATTTGCAGAAACAAAATGCCTTACAAAAGTGGTTGGTGTTCCTGTTACATTAAAT
GGGGATCTCAAGAATCAGTTTGTTGAAGCGAACGTTGGTTTTGACACAATCTGCAAGGTT
AACTCCCAACTAATTAGCAATGTATGCACTGATGCACTCTCAGCTGAGAAGTATTACTAT
TTCATTAGACTCATGGGGCGAAAGGCATCACATGTTGCATTAGAGTGCACTCTGCAGTCA
CATCCTAATATGGTGATTCTTGGAGAGGAGGTAGCTGCATCAAAGCTTACTATTTTTGAC
ATCACACAACAAATTTGTGATGCGGTTCAGGCTAGGGCTGAACATGATAAAAATCATGGT
GTTATCCTGTTGCCTGAGGGCCTTATTGAAAGTATTCCTGAAGTATATGCTCTATTGCAG
GAAATTCATGGTTTACTCAGGCAAGGTGTTTCTGCTGATAAGATTTCCTCTCAACTATCA
CCATGGGCTTCTGCACTTTTCGAATTTTTGCCGCATTTTATCAGAAAGCAGCTTCTCCTA
CACCCAGAATCAGATGACTCTGCTCAGCTATCACAGATTGAGACCGAGAAACTTATAGCT
CATCTCGTGGAAACAGAAATGAACAAGCGATTGAAAGAAGGAACTTACAAAGGAAAGAAA
TTTAATGCTATTTGCCATTTCTTTGGTTATCAAGCACGGGGATCATTGCCATCAAAGTTT
GATTGTGACTATGCCTACGTTCTTGGTCATGTTTGCTACCATATTTTAGCTGCTGGTCTT
AATGGTTACATGGCTACTATTACCAACCTGAAGAATCCTGCCAACAAGTGGCATTGTGGT
GCTTCCCCTATATCTGCAATGATGACTGTTAAGCGTTACGGTCGTGGTCCCGGTAAAGCA
TCAATTGGGGTACCTGCTTTGCATCCTGCTACTGTGGATTTGAGGGGCAAATCATATGAG
CTGTTGAGTCAAAATGCAACAAAGTTTTTGTTGGATGATGTTTATAGAAACCCAGGTCCC
CTCCAGTTTGATGGCCCTGGTGCAGATGCCAAGGCCGTTAGCCTTTGTGTTGAAGACCAG
GATTACATTGGCCGTATTAAGAAATTGCAGGAATACCTAGACAAGGTGCGTACAATTGTG
AAGCCTGGTTGCTCACAAGACGTCCTGAAGGCTGCATTAAGTGCCATGGCTTCTGTGACT
GACATTCTTTCAGTGATATCGTCACCCTCAAGTGTGAGCACACCATTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400017688
PEP Infomation

pacid=37472183 transcript=PGSC0003DMT400025919 locus=PGSC0003DMG400010007 ID=PGSC0003DMT400025919.v4.03 annot-version=v4.03
Sequence

MDADYGIPRELSDLQKLRSHYHPELPPCLQGTTVRVELRDATTAADPSGEHTIKRFFPHT
YGQPLAHFLRATAKVPDAQIITEHPAIRVGVLFCGRQSPGGHNVIWGLHDALKVHNPKNI
LLGFLGGSEGLFAQKTLEITDDVLATYKNQGGYDMLGRTKDQIRTTEQVNAAMAACKALK
LDGLVIIGGVTSNTDAAHLAEKFAETKCLTKVVGVPVTLNGDLKNQFVEANVGFDTICKV
NSQLISNVCTDALSAEKYYYFIRLMGRKASHVALECTLQSHPNMVILGEEVAASKLTIFD
ITQQICDAVQARAEHDKNHGVILLPEGLIESIPEVYALLQEIHGLLRQGVSADKISSQLS
PWASALFEFLPHFIRKQLLLHPESDDSAQLSQIETEKLIAHLVETEMNKRLKEGTYKGKK
FNAICHFFGYQARGSLPSKFDCDYAYVLGHVCYHILAAGLNGYMATITNLKNPANKWHCG
ASPISAMMTVKRYGRGPGKASIGVPALHPATVDLRGKSYELLSQNATKFLLDDVYRNPGP
LQFDGPGADAKAVSLCVEDQDYIGRIKKLQEYLDKVRTIVKPGCSQDVLKAALSAMASVT
DILSVISSPSSVSTPF*

Transcript Sequence

Transcript ID

PGSC0003DMT400025919
Transcript Infomation

pacid=37472183 locus=PGSC0003DMG400010007 ID=PGSC0003DMT400025919.v4.03 annot-version=v4.03
Sequence

ATGGATGCAGATTACGGCATACCTCGAGAACTCTCTGATTTGCAGAAGCTTCGGTCTCAC
TACCACCCTGAACTTCCTCCTTGTCTTCAGGGTACTACTGTCCGGGTAGAACTCCGTGAT
GCAACCACTGCAGCAGATCCCTCTGGTGAACACACAATTAAACGGTTCTTCCCACACACT
TATGGTCAACCATTAGCCCATTTTCTTAGGGCAACTGCCAAGGTCCCTGATGCTCAGATA
ATTACTGAACATCCTGCAATTAGGGTTGGGGTGCTATTTTGTGGTAGACAATCTCCTGGA
GGACACAATGTCATATGGGGTCTTCATGATGCTCTTAAGGTTCACAACCCCAAAAATATC
TTGCTTGGGTTTTTAGGTGGTTCTGAAGGTTTATTTGCACAAAAAACTCTAGAGATCACT
GATGATGTTCTTGCTACCTATAAGAATCAAGGTGGATATGACATGCTGGGACGGACAAAA
GATCAGATTAGAACGACTGAGCAAGTAAATGCTGCAATGGCTGCATGCAAAGCTTTGAAA
TTGGATGGCCTTGTCATCATTGGAGGAGTGACATCAAACACCGATGCTGCTCATCTGGCA
GAAAAATTTGCAGAAACAAAATGCCTTACAAAAGTGGTTGGTGTTCCTGTTACATTAAAT
GGGGATCTCAAGAATCAGTTTGTTGAAGCGAACGTTGGTTTTGACACAATCTGCAAGGTT
AACTCCCAACTAATTAGCAATGTATGCACTGATGCACTCTCAGCTGAGAAGTATTACTAT
TTCATTAGACTCATGGGGCGAAAGGCATCACATGTTGCATTAGAGTGCACTCTGCAGTCA
CATCCTAATATGGTGATTCTTGGAGAGGAGGTAGCTGCATCAAAGCTTACTATTTTTGAC
ATCACACAACAAATTTGTGATGCGGTTCAGGCTAGGGCTGAACATGATAAAAATCATGGT
GTTATCCTGTTGCCTGAGGGCCTTATTGAAAGTATTCCTGAAGTATATGCTCTATTGCAG
GAAATTCATGGTTTACTCAGGCAAGGTGTTTCTGCTGATAAGATTTCCTCTCAACTATCA
CCATGGGCTTCTGCACTTTTCGAATTTTTGCCGCATTTTATCAGAAAGCAGCTTCTCCTA
CACCCAGAATCAGATGACTCTGCTCAGCTATCACAGATTGAGACCGAGAAACTTATAGCT
CATCTCGTGGAAACAGAAATGAACAAGCGATTGAAAGAAGGAACTTACAAAGGAAAGAAA
TTTAATGCTATTTGCCATTTCTTTGGTTATCAAGCACGGGGATCATTGCCATCAAAGTTT
GATTGTGACTATGCCTACGTTCTTGGTCATGTTTGCTACCATATTTTAGCTGCTGGTCTT
AATGGTTACATGGCTACTATTACCAACCTGAAGAATCCTGCCAACAAGTGGCATTGTGGT
GCTTCCCCTATATCTGCAATGATGACTGTTAAGCGTTACGGTCGTGGTCCCGGTAAAGCA
TCAATTGGGGTACCTGCTTTGCATCCTGCTACTGTGGATTTGAGGGGCAAATCATATGAG
CTGTTGAGTCAAAATGCAACAAAGTTTTTGTTGGATGATGTTTATAGAAACCCAGGTCCC
CTCCAGTTTGATGGCCCTGGTGCAGATGCCAAGGCCGTTAGCCTTTGTGTTGAAGACCAG
GATTACATTGGCCGTATTAAGAAATTGCAGGAATACCTAGACAAGGTGCGTACAATTGTG
AAGCCTGGTTGCTCACAAGACGTCCTGAAGGCTGCATTAAGTGCCATGGCTTCTGTGACT
GACATTCTTTCAGTGATATCGTCACCCTCAAGTGTGAGCACACCATTTTAG