Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025886
CDS Infomation

pacid=37472480 polypeptide=PGSC0003DMP400017656 locus=PGSC0003DMG400009994 ID=PGSC0003DMT400025886.v4.03 annot-version=v4.03
Sequence

ATGAATGGTGCTGTGTTAGTTGCGCTTGCCGCGACAATTGGAAACTTTTTGCAGGGTTGG
GATAATGCTACTATTGCTGGAGCTGTTGTTTACATAAAGAAGGAGCTTGCTTTGGATGCT
TCAGTGGAAGGACTTGTTGTTGCGATGTCACTCATTGGAGCCACACTTGTCACAACTTGT
TCTGGATCCATAGCTGACAGTATTGGTCGTCGCCCTATGCTTATTATGTCATCCATGCTT
TATTTCCTTAGTGGCTTAATAATGTTGTGGTCCCCTAATGTCTATGTCCTGCTTATAGCT
AGACTATTAGATGGATTTGGAATCGGCTTAGCGGTTACTCTGGTCCCCCTATATATATCT
GAGACTGCTCCATCAGAAATACGAGGGTCACTGAATACTCTTCCACAATTCACTGGTTCT
GGTGGAATGTTCTTGGCCTACTGCATGATTTTCGGAATGTCCTTAATGACAGCGCCGAGT
TGGCGATTGATGTTGGGTGTTCTTTCAATTCCTTCTCTTATCTATTTCGTATTAGTTGTA
CTTTATTTGCCTGAGTCTCCTCGATGGCTAGTGAGTAAAGGAAGAATGGTCGAGGCAAAA
CAAGTTTTGCAGAAATTGCGTGGCATAGAGGATGTTTCAGGGGAGATGGCATTGCTTGTT
GAGGGTTTGGCAGTTGGCATTGAACCATCAATAGAAGAGTATATCATTGGTCCAGCTAAT
GCGCTTACTGAGGATCAGGACCTGGCTACTGACAAAGATCATATCAAGTTGTACGGCCCA
GAGGAAGGCCTCTCGTGGGTGGCCAAGCCAGTTACTGGACAGAGTAGTCTAGCTCTTGTG
TCCAGGCAAGGGAGCATGGTGCAGCAGAGTGTGCCTCTTATGGATCCTCTTGTGACTCTA
TTTGGTAGTGTCCATGAGAATCTCCCTGATACAGGAAGTATGAGAAGCATGCTATTCCCC
AATTTCGGAAGCATGATCAGCACCATGGATCCTCATGTCAAAGATGATCACTGGGATGAG
GAGAGTCTGCAGAGAGAAGGTGATGATTATCCTTCGGATGGCGGTGCAGATTCTGATGAC
AATCTACAAAGTCCATTGATATCACGTCAAACAACCGCTGTGGAAACCGTAGTCCCTCAT
CCCCATGGCAGCACTCTGAGCGTGAGGCGGCATAGCAGCCTTATGCAAGGCAATGCTGGA
GAGGGTGTAGGCAGCATGGGCATTGGTGGTGGTTGGCAGTTGGCATGGAAATGGTCTGAA
AGGGAAGGTGAAGATGGAACTAAAGAAGGAGGCTTCAAAAGGATATATTTGCATCAGGAG
GCAGGCCCTGGCTCTCGACGTGGGTCTCTCGTTTCAGTCCCTGGTGGTGATATTCCTGAA
GATGGTGAATTCATACAAGCTGCGGCTTTGGTAAGTCAGCCTGCACTTTACTCAAAGGAA
CTTATGGATCAGCATCCTGTGGGACCAGCGATGGTCCATCCATCTGAAACTGCTTCAAAA
GGTCCGAGTTGGGCTGCTCTTCTTGAACCTGGAGTCAAGCGAGCGCTCATTGTTGGAATT
GGAATTCAAATATTGCAACAGTTTTCCGGTATAAATGGAGTCATGTACTACACTCCTCAA
ATCCTTGAGCAGGCAGGTGTAGGAGTTCTTCTTTCTAACTTTGGCATCGCATCAGACTCA
GCATCCTTCCTCATCAGTGCGTTAACAAACTTCCTGATGCTCCCTTCTGTAGCTATTGCA
ATGCGATTCATGGATGTGGCTGGCAGAAGGTCGCTGCTGCTGTACACTATTCCTGTTCTC
ATACTATCACTCATCTGTCTTGTCATTGGTAACACTATCAACCTCGGGAGTGTGGCTCAT
GCAGTCGTTTCTACTATTTGCGTGATTCTCTACTTTTGCTTCTTTGTAACGGGCTATGGA
CCAATCCCAAATATTCTCTGCTCAGAAATTTTCCCAACAAGGGTTCGTGGTTTGTGCATT
GCCATCTGTGCTCTCGTCTTCTGGATATGTGATGTCATTGTGACTTACACACTGCCTGTG
ATGCTCAACTCGATTGGCTTATCTGGAGTTTTTGGTATTTATGCCATTGTATGTGTCATT
TCTTGGATTTTCGTCTTCTTGAGGGTTCCCGAAACCAAAGGCATGCCCTTAGAAGTCATT
ACAGAGTTCTTTGCTGTTGGTGCAAGACAAGCTGCTATCGCGAAGCATGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400017656
PEP Infomation

pacid=37472480 transcript=PGSC0003DMT400025886 locus=PGSC0003DMG400009994 ID=PGSC0003DMT400025886.v4.03 annot-version=v4.03
Sequence

MNGAVLVALAATIGNFLQGWDNATIAGAVVYIKKELALDASVEGLVVAMSLIGATLVTTC
SGSIADSIGRRPMLIMSSMLYFLSGLIMLWSPNVYVLLIARLLDGFGIGLAVTLVPLYIS
ETAPSEIRGSLNTLPQFTGSGGMFLAYCMIFGMSLMTAPSWRLMLGVLSIPSLIYFVLVV
LYLPESPRWLVSKGRMVEAKQVLQKLRGIEDVSGEMALLVEGLAVGIEPSIEEYIIGPAN
ALTEDQDLATDKDHIKLYGPEEGLSWVAKPVTGQSSLALVSRQGSMVQQSVPLMDPLVTL
FGSVHENLPDTGSMRSMLFPNFGSMISTMDPHVKDDHWDEESLQREGDDYPSDGGADSDD
NLQSPLISRQTTAVETVVPHPHGSTLSVRRHSSLMQGNAGEGVGSMGIGGGWQLAWKWSE
REGEDGTKEGGFKRIYLHQEAGPGSRRGSLVSVPGGDIPEDGEFIQAAALVSQPALYSKE
LMDQHPVGPAMVHPSETASKGPSWAALLEPGVKRALIVGIGIQILQQFSGINGVMYYTPQ
ILEQAGVGVLLSNFGIASDSASFLISALTNFLMLPSVAIAMRFMDVAGRRSLLLYTIPVL
ILSLICLVIGNTINLGSVAHAVVSTICVILYFCFFVTGYGPIPNILCSEIFPTRVRGLCI
AICALVFWICDVIVTYTLPVMLNSIGLSGVFGIYAIVCVISWIFVFLRVPETKGMPLEVI
TEFFAVGARQAAIAKHE*

Transcript Sequence

Transcript ID

PGSC0003DMT400025886
Transcript Infomation

pacid=37472480 locus=PGSC0003DMG400009994 ID=PGSC0003DMT400025886.v4.03 annot-version=v4.03
Sequence

ATGAATGGTGCTGTGTTAGTTGCGCTTGCCGCGACAATTGGAAACTTTTTGCAGGGTTGG
GATAATGCTACTATTGCTGGAGCTGTTGTTTACATAAAGAAGGAGCTTGCTTTGGATGCT
TCAGTGGAAGGACTTGTTGTTGCGATGTCACTCATTGGAGCCACACTTGTCACAACTTGT
TCTGGATCCATAGCTGACAGTATTGGTCGTCGCCCTATGCTTATTATGTCATCCATGCTT
TATTTCCTTAGTGGCTTAATAATGTTGTGGTCCCCTAATGTCTATGTCCTGCTTATAGCT
AGACTATTAGATGGATTTGGAATCGGCTTAGCGGTTACTCTGGTCCCCCTATATATATCT
GAGACTGCTCCATCAGAAATACGAGGGTCACTGAATACTCTTCCACAATTCACTGGTTCT
GGTGGAATGTTCTTGGCCTACTGCATGATTTTCGGAATGTCCTTAATGACAGCGCCGAGT
TGGCGATTGATGTTGGGTGTTCTTTCAATTCCTTCTCTTATCTATTTCGTATTAGTTGTA
CTTTATTTGCCTGAGTCTCCTCGATGGCTAGTGAGTAAAGGAAGAATGGTCGAGGCAAAA
CAAGTTTTGCAGAAATTGCGTGGCATAGAGGATGTTTCAGGGGAGATGGCATTGCTTGTT
GAGGGTTTGGCAGTTGGCATTGAACCATCAATAGAAGAGTATATCATTGGTCCAGCTAAT
GCGCTTACTGAGGATCAGGACCTGGCTACTGACAAAGATCATATCAAGTTGTACGGCCCA
GAGGAAGGCCTCTCGTGGGTGGCCAAGCCAGTTACTGGACAGAGTAGTCTAGCTCTTGTG
TCCAGGCAAGGGAGCATGGTGCAGCAGAGTGTGCCTCTTATGGATCCTCTTGTGACTCTA
TTTGGTAGTGTCCATGAGAATCTCCCTGATACAGGAAGTATGAGAAGCATGCTATTCCCC
AATTTCGGAAGCATGATCAGCACCATGGATCCTCATGTCAAAGATGATCACTGGGATGAG
GAGAGTCTGCAGAGAGAAGGTGATGATTATCCTTCGGATGGCGGTGCAGATTCTGATGAC
AATCTACAAAGTCCATTGATATCACGTCAAACAACCGCTGTGGAAACCGTAGTCCCTCAT
CCCCATGGCAGCACTCTGAGCGTGAGGCGGCATAGCAGCCTTATGCAAGGCAATGCTGGA
GAGGGTGTAGGCAGCATGGGCATTGGTGGTGGTTGGCAGTTGGCATGGAAATGGTCTGAA
AGGGAAGGTGAAGATGGAACTAAAGAAGGAGGCTTCAAAAGGATATATTTGCATCAGGAG
GCAGGCCCTGGCTCTCGACGTGGGTCTCTCGTTTCAGTCCCTGGTGGTGATATTCCTGAA
GATGGTGAATTCATACAAGCTGCGGCTTTGGTAAGTCAGCCTGCACTTTACTCAAAGGAA
CTTATGGATCAGCATCCTGTGGGACCAGCGATGGTCCATCCATCTGAAACTGCTTCAAAA
GGTCCGAGTTGGGCTGCTCTTCTTGAACCTGGAGTCAAGCGAGCGCTCATTGTTGGAATT
GGAATTCAAATATTGCAACAGTTTTCCGGTATAAATGGAGTCATGTACTACACTCCTCAA
ATCCTTGAGCAGGCAGGTGTAGGAGTTCTTCTTTCTAACTTTGGCATCGCATCAGACTCA
GCATCCTTCCTCATCAGTGCGTTAACAAACTTCCTGATGCTCCCTTCTGTAGCTATTGCA
ATGCGATTCATGGATGTGGCTGGCAGAAGGTCGCTGCTGCTGTACACTATTCCTGTTCTC
ATACTATCACTCATCTGTCTTGTCATTGGTAACACTATCAACCTCGGGAGTGTGGCTCAT
GCAGTCGTTTCTACTATTTGCGTGATTCTCTACTTTTGCTTCTTTGTAACGGGCTATGGA
CCAATCCCAAATATTCTCTGCTCAGAAATTTTCCCAACAAGGGTTCGTGGTTTGTGCATT
GCCATCTGTGCTCTCGTCTTCTGGATATGTGATGTCATTGTGACTTACACACTGCCTGTG
ATGCTCAACTCGATTGGCTTATCTGGAGTTTTTGGTATTTATGCCATTGTATGTGTCATT
TCTTGGATTTTCGTCTTCTTGAGGGTTCCCGAAACCAAAGGCATGCCCTTAGAAGTCATT
ACAGAGTTCTTTGCTGTTGGTGCAAGACAAGCTGCTATCGCGAAGCATGAGTAG