Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025873
CDS Infomation

pacid=37474124 polypeptide=PGSC0003DMP400017646 locus=PGSC0003DMG400009989 ID=PGSC0003DMT400025873.v4.03 annot-version=v4.03
Sequence

ATGACATCAGAAAGATTAACAGGAGAAGAATCTCTTCAACAAGATCTGGAGTCTTTAAGC
GTGTCTAAAAGGTTAGTCAGAAGTGTGAGCCAAAAGTTGAAAAAGAAGAACCATAGAAGT
GGAGGAGAAGAAGAGGATGACAGCAAGGGTATTTCCTTGAGATGTCTAACGCTATATGGC
AGAGGGGGTGGTTGCAAAGTGGGTGCTGACACTGGTGACGACCTAGGGGATTCATGCGGT
AGAAGAAGATCAAATGCAAGTGAGGAAGGCAAAGGGTACAACCCGATATGTGGAAATGAA
GAAACGTCAGTAGATTGCTTCTCTTATGGGATGAGGGAAAAATTCTGGAGGAGGTCTAAT
AGGAAATCTCTAGAGCTTGAAGCAGCACTCCAGAACAAAAGCATGAATGTGTTTTTGCCA
GATGATATCCTCGAAATGTGCTTATTGAGGCTTCCATTTATAAGTCTCGTGAATGCTAGG
ATGGTCTGCAAGAAATGGAGAAACTTGACAATGACACCTCGTTTCTGGCGAATGAGGCAG
GAAGGTTCGTTCCAGAGTCCATGGTTGTTTCTTTTTGGGGTTGTAAAAGATGGCTGTTGT
TCCGCAGAAATACATGCATTTGATGTTTCCTTCAACCAATGGCACAAAATGAATTCTGAA
GTTCTGAAAGGGAGGTTTTTATTCTCTGTTGCTGGTATCCATGATGATGTTTACGTTGCT
GGAGGTTGTTCTAGCCTTGCTAACTTTGGGAAGGTTGATAAGAGCTCATTCAAGACACAT
AAAAGTGTGCTCGTTTTTAGTCCCTTGATGAGAACGTGGCGTAAAGCTGCACCGATGAAG
CATGCAAGATCATCCCCTATTTTAGGAACTTATGAGATCAGTTCAGATTGTTTAATTATT
AGGAATCAACAAACTCGAGGAGACAAAAGATTTTACCGTCCAAGAGTTGGTGGTGTATCT
GATGTTTATGAAGATCCTCATAGACTTTCAGTGAGACGCCAATTTCGACATTCTCTGGAT
GAGAACGAAGTTACATTCTTTCCCAATGTGAAACCATACAAGTTTGTCAAACAAAAAACC
GAACCTTCAAATAAAGATCAAAGACGCTTTCTCTTGATTGCTGTAGGAGGTCTCGGGTGC
TGGGATGAGCCTCTGGATTCTGGGGAAATTTATGATTCCATGTCAAATAAATGGACAGAG
ATCCAGAGGCTTCCTGTAGATTTCGGAATAGCTTGTTCAGGGGTTGTGTGCAATGGGTTG
TTTTATGTTTATTCAGAAACTGATAAGCTAGCTTCATATGACGTTGAGAAGGGCTATTGG
GTTAGAATCCAAACTAGTCCATTCCCTCCCCGAGTTCATGAATACCACCCTAAACTTATA
TGCTGCAATAGTCGGCTATTCATGCTCTCTGTCTCCTGGTGTGAAGGGGAAGGTCAGATT
GGCAGGAGAAACAAAGCAGTAAGGAAACTCTGGGAGCTAGATCTTATGCCTCTCACTTGG
AGAGAAGTTTCAATCCATCCAGATGCCCCAATGGATTGGAATGCTGCATTTATAGCTGAT
AAAAACTCTATATTTGGAGTCGAAATGTTCAAAATATTCGGGCAGGTGCTAGACTTCTTG
ACCGTTGGAGATGTAACCGATGCTGGAATAAACTGGAGCCATATCTCAAGGAATCGTCTT
GCGCAAGAATTGGATGCTGCTTCTTGCTTGACGAAATCCATGGCAGTACTGCATTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017646
PEP Infomation

pacid=37474124 transcript=PGSC0003DMT400025873 locus=PGSC0003DMG400009989 ID=PGSC0003DMT400025873.v4.03 annot-version=v4.03
Sequence

MTSERLTGEESLQQDLESLSVSKRLVRSVSQKLKKKNHRSGGEEEDDSKGISLRCLTLYG
RGGGCKVGADTGDDLGDSCGRRRSNASEEGKGYNPICGNEETSVDCFSYGMREKFWRRSN
RKSLELEAALQNKSMNVFLPDDILEMCLLRLPFISLVNARMVCKKWRNLTMTPRFWRMRQ
EGSFQSPWLFLFGVVKDGCCSAEIHAFDVSFNQWHKMNSEVLKGRFLFSVAGIHDDVYVA
GGCSSLANFGKVDKSSFKTHKSVLVFSPLMRTWRKAAPMKHARSSPILGTYEISSDCLII
RNQQTRGDKRFYRPRVGGVSDVYEDPHRLSVRRQFRHSLDENEVTFFPNVKPYKFVKQKT
EPSNKDQRRFLLIAVGGLGCWDEPLDSGEIYDSMSNKWTEIQRLPVDFGIACSGVVCNGL
FYVYSETDKLASYDVEKGYWVRIQTSPFPPRVHEYHPKLICCNSRLFMLSVSWCEGEGQI
GRRNKAVRKLWELDLMPLTWREVSIHPDAPMDWNAAFIADKNSIFGVEMFKIFGQVLDFL
TVGDVTDAGINWSHISRNRLAQELDAASCLTKSMAVLHL*

Transcript Sequence

Transcript ID

PGSC0003DMT400025873
Transcript Infomation

pacid=37474124 locus=PGSC0003DMG400009989 ID=PGSC0003DMT400025873.v4.03 annot-version=v4.03
Sequence

ATGACATCAGAAAGATTAACAGGAGAAGAATCTCTTCAACAAGATCTGGAGTCTTTAAGC
GTGTCTAAAAGGTTAGTCAGAAGTGTGAGCCAAAAGTTGAAAAAGAAGAACCATAGAAGT
GGAGGAGAAGAAGAGGATGACAGCAAGGGTATTTCCTTGAGATGTCTAACGCTATATGGC
AGAGGGGGTGGTTGCAAAGTGGGTGCTGACACTGGTGACGACCTAGGGGATTCATGCGGT
AGAAGAAGATCAAATGCAAGTGAGGAAGGCAAAGGGTACAACCCGATATGTGGAAATGAA
GAAACGTCAGTAGATTGCTTCTCTTATGGGATGAGGGAAAAATTCTGGAGGAGGTCTAAT
AGGAAATCTCTAGAGCTTGAAGCAGCACTCCAGAACAAAAGCATGAATGTGTTTTTGCCA
GATGATATCCTCGAAATGTGCTTATTGAGGCTTCCATTTATAAGTCTCGTGAATGCTAGG
ATGGTCTGCAAGAAATGGAGAAACTTGACAATGACACCTCGTTTCTGGCGAATGAGGCAG
GAAGGTTCGTTCCAGAGTCCATGGTTGTTTCTTTTTGGGGTTGTAAAAGATGGCTGTTGT
TCCGCAGAAATACATGCATTTGATGTTTCCTTCAACCAATGGCACAAAATGAATTCTGAA
GTTCTGAAAGGGAGGTTTTTATTCTCTGTTGCTGGTATCCATGATGATGTTTACGTTGCT
GGAGGTTGTTCTAGCCTTGCTAACTTTGGGAAGGTTGATAAGAGCTCATTCAAGACACAT
AAAAGTGTGCTCGTTTTTAGTCCCTTGATGAGAACGTGGCGTAAAGCTGCACCGATGAAG
CATGCAAGATCATCCCCTATTTTAGGAACTTATGAGATCAGTTCAGATTGTTTAATTATT
AGGAATCAACAAACTCGAGGAGACAAAAGATTTTACCGTCCAAGAGTTGGTGGTGTATCT
GATGTTTATGAAGATCCTCATAGACTTTCAGTGAGACGCCAATTTCGACATTCTCTGGAT
GAGAACGAAGTTACATTCTTTCCCAATGTGAAACCATACAAGTTTGTCAAACAAAAAACC
GAACCTTCAAATAAAGATCAAAGACGCTTTCTCTTGATTGCTGTAGGAGGTCTCGGGTGC
TGGGATGAGCCTCTGGATTCTGGGGAAATTTATGATTCCATGTCAAATAAATGGACAGAG
ATCCAGAGGCTTCCTGTAGATTTCGGAATAGCTTGTTCAGGGGTTGTGTGCAATGGGTTG
TTTTATGTTTATTCAGAAACTGATAAGCTAGCTTCATATGACGTTGAGAAGGGCTATTGG
GTTAGAATCCAAACTAGTCCATTCCCTCCCCGAGTTCATGAATACCACCCTAAACTTATA
TGCTGCAATAGTCGGCTATTCATGCTCTCTGTCTCCTGGTGTGAAGGGGAAGGTCAGATT
GGCAGGAGAAACAAAGCAGTAAGGAAACTCTGGGAGCTAGATCTTATGCCTCTCACTTGG
AGAGAAGTTTCAATCCATCCAGATGCCCCAATGGATTGGAATGCTGCATTTATAGCTGAT
AAAAACTCTATATTTGGAGTCGAAATGTTCAAAATATTCGGGCAGGTGCTAGACTTCTTG
ACCGTTGGAGATGTAACCGATGCTGGAATAAACTGGAGCCATATCTCAAGGAATCGTCTT
GCGCAAGAATTGGATGCTGCTTCTTGCTTGACGAAATCCATGGCAGTACTGCATTTGTAA