Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025836
CDS Infomation

pacid=37473876 polypeptide=PGSC0003DMP400017617 locus=PGSC0003DMG400009977 ID=PGSC0003DMT400025836.v4.03 annot-version=v4.03
Sequence

ATGAAAAGGTTGAATCTTCAGCCAAATATCAGGACATATGAGTTGCTATTCTCACTGTTT
GGTAATGTGAATGCACCTTATGAAGAGGGCAACATGCTGTCACAAGTGGATGTTGCTAAA
AGGATAAATACTATAGAAACGGACATGATGAAGAATGGCATTCAGCACAGTCATTTGTCG
TTGAGGAATGTGTTGAAAGCGCTTGGAACAGAAGGGATGGTAAAGGAGCTGATTCAATAT
TTACGTGCTGCAGAGAATCGGTTTTCTCGTTACGACACTTATATGATAACACCTGTCTAT
AATACAGTTTTACACTCCCTTGTTGAGGCTAAAGAGAGTCGAATGGCAACACAGATATTC
AAGTCAATGGTGTCTTCTGGAGTTCCACCTGATGCTGCAACGTATAATATCATGATTGAT
GGGTGTAGCATTGTTGGATGTTTCAGATCTGCACTTGCCCTGATCTCTATGATGTTCCGC
AGTGGTTTCAATCCTCAAGCAGTGACTTTAACTGGCCTGTTAAAGATATTGTTGAGATCT
GAGGACTTTGATGGAGCATTAGAATTGTTGAATCAAGGTATTTCAGAAGGGATCCAGCTT
GATGTACTTCTATATAACACCATTTTTCAAGTGGCAGCTGAGAAGGGAAGAATAGATGTC
ATCGAGCTCATTGTGGAGCATATGCACCTCCAAGGAGTTCTGCCAGACCCATCAACTTGC
AGTCATGTTTTCGCTGCATATGTAGACCATGGATTCTATAACACTGCTATGGAAGCTTTG
CAAGTTTTGAGTGTGCGAATGATTGCTGGGGTTGACAAAGATACAGATGAAAAACGAACT
GAACTTGAAAATCTAATTCTTGGTGAAGACTCGGAAGATGAGCCCCAGATTCTTGAGACT
TTTAAAGACTCAAAAGAATATCTTACTGTTGCCTTACTGCAACTAAGATGGTGTGCCATA
CTTGGATATCCAGTATCTTGGTCACCTTCGGACAGTCAATGGGCTAGGAGACTTTCAAGT
AATCTTGCTTCAACAAACGGTCTTCTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400017617
PEP Infomation

pacid=37473876 transcript=PGSC0003DMT400025836 locus=PGSC0003DMG400009977 ID=PGSC0003DMT400025836.v4.03 annot-version=v4.03
Sequence

MKRLNLQPNIRTYELLFSLFGNVNAPYEEGNMLSQVDVAKRINTIETDMMKNGIQHSHLS
LRNVLKALGTEGMVKELIQYLRAAENRFSRYDTYMITPVYNTVLHSLVEAKESRMATQIF
KSMVSSGVPPDAATYNIMIDGCSIVGCFRSALALISMMFRSGFNPQAVTLTGLLKILLRS
EDFDGALELLNQGISEGIQLDVLLYNTIFQVAAEKGRIDVIELIVEHMHLQGVLPDPSTC
SHVFAAYVDHGFYNTAMEALQVLSVRMIAGVDKDTDEKRTELENLILGEDSEDEPQILET
FKDSKEYLTVALLQLRWCAILGYPVSWSPSDSQWARRLSSNLASTNGLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400025836
Transcript Infomation

pacid=37473876 locus=PGSC0003DMG400009977 ID=PGSC0003DMT400025836.v4.03 annot-version=v4.03
Sequence

ATGAAAAGGTTGAATCTTCAGCCAAATATCAGGACATATGAGTTGCTATTCTCACTGTTT
GGTAATGTGAATGCACCTTATGAAGAGGGCAACATGCTGTCACAAGTGGATGTTGCTAAA
AGGATAAATACTATAGAAACGGACATGATGAAGAATGGCATTCAGCACAGTCATTTGTCG
TTGAGGAATGTGTTGAAAGCGCTTGGAACAGAAGGGATGGTAAAGGAGCTGATTCAATAT
TTACGTGCTGCAGAGAATCGGTTTTCTCGTTACGACACTTATATGATAACACCTGTCTAT
AATACAGTTTTACACTCCCTTGTTGAGGCTAAAGAGAGTCGAATGGCAACACAGATATTC
AAGTCAATGGTGTCTTCTGGAGTTCCACCTGATGCTGCAACGTATAATATCATGATTGAT
GGGTGTAGCATTGTTGGATGTTTCAGATCTGCACTTGCCCTGATCTCTATGATGTTCCGC
AGTGGTTTCAATCCTCAAGCAGTGACTTTAACTGGCCTGTTAAAGATATTGTTGAGATCT
GAGGACTTTGATGGAGCATTAGAATTGTTGAATCAAGGTATTTCAGAAGGGATCCAGCTT
GATGTACTTCTATATAACACCATTTTTCAAGTGGCAGCTGAGAAGGGAAGAATAGATGTC
ATCGAGCTCATTGTGGAGCATATGCACCTCCAAGGAGTTCTGCCAGACCCATCAACTTGC
AGTCATGTTTTCGCTGCATATGTAGACCATGGATTCTATAACACTGCTATGGAAGCTTTG
CAAGTTTTGAGTGTGCGAATGATTGCTGGGGTTGACAAAGATACAGATGAAAAACGAACT
GAACTTGAAAATCTAATTCTTGGTGAAGACTCGGAAGATGAGCCCCAGATTCTTGAGACT
TTTAAAGACTCAAAAGAATATCTTACTGTTGCCTTACTGCAACTAAGATGGTGTGCCATA
CTTGGATATCCAGTATCTTGGTCACCTTCGGACAGTCAATGGGCTAGGAGACTTTCAAGT
AATCTTGCTTCAACAAACGGTCTTCTATGA