Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025830
CDS Infomation

pacid=37474588 polypeptide=PGSC0003DMP400017612 locus=PGSC0003DMG400009976 ID=PGSC0003DMT400025830.v4.03 annot-version=v4.03
Sequence

ATGCAAGGAGGATCAAATGGAATCGGTTATGGTCTCAAATATCAGGCACGATGCATTGCC
GATGTGAAAGCTGATACGGATCACACCAGTTTCCTCACCGGAACTCTCAGCCTGAAAGAA
GAAAATGAGGTACATTTGATCCGGATTTCTTCAGCTGGTACTGAATTGCTCTGCGAAGGT
CTTTTTTCTCATCCTAATGAGATCTGGGACCTTGCGTCGTGCCCCTTCGATCAACGGATT
TTCTCTACTGTTTTTTCTTCCGGTGAAACATATGGGGCAGCAATATGGCAGATCCCTGAG
TTGTATGGCCAGTCGAATTCTCCACAACTAGAGAGGATTGCATCTCTTGATGCTCATAAT
TCGAAGATAAAGTGCACACTTTGGTGGCCAACAGGAAGGCATGACAAGTTGGTTAGCATT
GATGAACAGAATCTTTTCCTCTGGAGCTTTGATACTTCAAAGAAGAATGCACAGGTACAA
TCACAAGAATCAGCAGGTGTGCTACATTCTTTAACTGGGGGCGCCTGGGATCCCCATGAT
TATAATGCTCTAGCACTAACAAGTGAATCATCAGTCCAACTTTGGGATCTACGGACAATG
AAGAAAACAAATTCAATCGATCATCCTCATGTCCGTAATTTGGATTACAATGTGAAGAGA
GAGTATACACTTGTAACGGCTGAAGATGAATCTGGGATACATATATGGGATCTTAGAATG
CTGAAGTTTCCAGTCCTTGATCTCCCTGGACATACTCACTGGACATGGACTGTCAAGTGC
AATCCCGAATATGAAGACTTAATTCTGAGTGCTGGAACTGATTCTGCGGTCAATCTGTGG
CTGGCTTCTCCTCCTAGTAGTGACGAACCAACTTCAGAGAGGTCCTTTCCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017612
PEP Infomation

pacid=37474588 transcript=PGSC0003DMT400025830 locus=PGSC0003DMG400009976 ID=PGSC0003DMT400025830.v4.03 annot-version=v4.03
Sequence

MQGGSNGIGYGLKYQARCIADVKADTDHTSFLTGTLSLKEENEVHLIRISSAGTELLCEG
LFSHPNEIWDLASCPFDQRIFSTVFSSGETYGAAIWQIPELYGQSNSPQLERIASLDAHN
SKIKCTLWWPTGRHDKLVSIDEQNLFLWSFDTSKKNAQVQSQESAGVLHSLTGGAWDPHD
YNALALTSESSVQLWDLRTMKKTNSIDHPHVRNLDYNVKREYTLVTAEDESGIHIWDLRM
LKFPVLDLPGHTHWTWTVKCNPEYEDLILSAGTDSAVNLWLASPPSSDEPTSERSFP*

Transcript Sequence

Transcript ID

PGSC0003DMT400025830
Transcript Infomation

pacid=37474588 locus=PGSC0003DMG400009976 ID=PGSC0003DMT400025830.v4.03 annot-version=v4.03
Sequence

ATGCAAGGAGGATCAAATGGAATCGGTTATGGTCTCAAATATCAGGCACGATGCATTGCC
GATGTGAAAGCTGATACGGATCACACCAGTTTCCTCACCGGAACTCTCAGCCTGAAAGAA
GAAAATGAGGTACATTTGATCCGGATTTCTTCAGCTGGTACTGAATTGCTCTGCGAAGGT
CTTTTTTCTCATCCTAATGAGATCTGGGACCTTGCGTCGTGCCCCTTCGATCAACGGATT
TTCTCTACTGTTTTTTCTTCCGGTGAAACATATGGGGCAGCAATATGGCAGATCCCTGAG
TTGTATGGCCAGTCGAATTCTCCACAACTAGAGAGGATTGCATCTCTTGATGCTCATAAT
TCGAAGATAAAGTGCACACTTTGGTGGCCAACAGGAAGGCATGACAAGTTGGTTAGCATT
GATGAACAGAATCTTTTCCTCTGGAGCTTTGATACTTCAAAGAAGAATGCACAGGTACAA
TCACAAGAATCAGCAGGTGTGCTACATTCTTTAACTGGGGGCGCCTGGGATCCCCATGAT
TATAATGCTCTAGCACTAACAAGTGAATCATCAGTCCAACTTTGGGATCTACGGACAATG
AAGAAAACAAATTCAATCGATCATCCTCATGTCCGTAATTTGGATTACAATGTGAAGAGA
GAGTATACACTTGTAACGGCTGAAGATGAATCTGGGATACATATATGGGATCTTAGAATG
CTGAAGTTTCCAGTCCTTGATCTCCCTGGACATACTCACTGGACATGGACTGTCAAGTGC
AATCCCGAATATGAAGACTTAATTCTGAGTGCTGGAACTGATTCTGCGGTCAATCTGTGG
CTGGCTTCTCCTCCTAGTAGTGACGAACCAACTTCAGAGAGGTCCTTTCCGTAA