Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025822
CDS Infomation

pacid=37475376 polypeptide=PGSC0003DMP400017604 locus=PGSC0003DMG400009974 ID=PGSC0003DMT400025822.v4.03 annot-version=v4.03
Sequence

ATGATGAAAAAATGTTCAAAATGGGTTTCTTCAGATCTTCATTGGAAGCTTTTACTCTTG
ATTCTTCCTCTACTTTCTCTCCTTTTTTACTTTTCTCTTTCCTCCATTTCCGCCATAGCC
AGTAACACTTTTTCCACTTTTGCCCCTCTCAACTCTTTTTTCAACAATAACGCCCCTGTT
CCTCCGCATCCGCCGGTTTTTACGAATCAAACAGGCTTAGATCGGTCTGAGCCTCTGTTT
CCGCCGGTTTTTTTGAATCGATCGGTAACGAAGGAGGAGTTGAACCGGTCTAGAATTGCT
GTGTGTATAGTGGGTGGGGCTCGTAGGTTTGAACTAACTGGGCCTTCTGTAATACAGAAA
ATTCTGAAAGAGTATCCGAATTCTGATCTGTACCTTCATAGTCCGTTGGATTCTAATGCC
TACAAGCTTTCCTTGTTAAAAAATGCTCCTCGAATCTCCGCCATTAAAATTTTCAAGCCT
AAAACCATTAAAGAGACTGAGTTTCAGGTCCGAGTTCTCAGTGCTCGTGGCTCACCTAAT
GGTATTCAGGGCCTCCTGCAATATTTCAACCTGGTTGAGGGTTGCTTGACGATGATTCAA
GCCTACCAGCACAAGAACAACTTCACTTATGATTGGATAATCCGTACCCGAGTTGATGGA
TACTGGAACTCTCCACTATCACCCGAGGACTTCATTCCCGGCGCCTATTTAGTCCCTTCT
GGTTCATCCTACGGTGGCTTAAATGATCGCTTTGGCCTTGGTGACTACAACACTTCTGTA
GTAGCTCTTTCACGGCTCTCCTTGATTCCTGAGTTGGATGCAGCCAGATACCATCTCCTC
AACTCCGAGGGTGCATTCAAGGCCCAACTGACTATCCACAGAGTTCCCTGCATCTCTAAG
CGCCTCCCATTTTGTGTTGTATCAGATCGTAGCTATGATTTTCCACCACCCCGTTTTGGT
GTTCCAGTAGCAGCACTTTCTAGTCCAGGCCCATTAAGTGGTGCCAAGTGCCGGCCTTGC
ACACCTCCGTGCACTCACCACTGCGTTGGTCTTATGATGAACAAACTGTACAGAGGATGG
AGCTGGACCGACTGGGCCAATAACACCCTTCAGCTCTGTGATGCCCATGCCGAGTGGGAG
AGTGGTTGGCAGAAAATATTCGACCAAGTGGCAGGTAATAAACTAGCTGCAGCGAGACAA
CGAGTTGAAAATCTAAAAATGGAGCAGTGTGTGAAAGATTTCGCGGAATTAATGAAAAAA
ACTGCTTATTGGGAGGCTCCTCCAGTGTCTCAAATTTGTCGATTGGGTTTATCAGTGCCC
GTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017604
PEP Infomation

pacid=37475376 transcript=PGSC0003DMT400025822 locus=PGSC0003DMG400009974 ID=PGSC0003DMT400025822.v4.03 annot-version=v4.03
Sequence

MMKKCSKWVSSDLHWKLLLLILPLLSLLFYFSLSSISAIASNTFSTFAPLNSFFNNNAPV
PPHPPVFTNQTGLDRSEPLFPPVFLNRSVTKEELNRSRIAVCIVGGARRFELTGPSVIQK
ILKEYPNSDLYLHSPLDSNAYKLSLLKNAPRISAIKIFKPKTIKETEFQVRVLSARGSPN
GIQGLLQYFNLVEGCLTMIQAYQHKNNFTYDWIIRTRVDGYWNSPLSPEDFIPGAYLVPS
GSSYGGLNDRFGLGDYNTSVVALSRLSLIPELDAARYHLLNSEGAFKAQLTIHRVPCISK
RLPFCVVSDRSYDFPPPRFGVPVAALSSPGPLSGAKCRPCTPPCTHHCVGLMMNKLYRGW
SWTDWANNTLQLCDAHAEWESGWQKIFDQVAGNKLAAARQRVENLKMEQCVKDFAELMKK
TAYWEAPPVSQICRLGLSVPV*

Transcript Sequence

Transcript ID

PGSC0003DMT400025822
Transcript Infomation

pacid=37475376 locus=PGSC0003DMG400009974 ID=PGSC0003DMT400025822.v4.03 annot-version=v4.03
Sequence

ATGATGAAAAAATGTTCAAAATGGGTTTCTTCAGATCTTCATTGGAAGCTTTTACTCTTG
ATTCTTCCTCTACTTTCTCTCCTTTTTTACTTTTCTCTTTCCTCCATTTCCGCCATAGCC
AGTAACACTTTTTCCACTTTTGCCCCTCTCAACTCTTTTTTCAACAATAACGCCCCTGTT
CCTCCGCATCCGCCGGTTTTTACGAATCAAACAGGCTTAGATCGGTCTGAGCCTCTGTTT
CCGCCGGTTTTTTTGAATCGATCGGTAACGAAGGAGGAGTTGAACCGGTCTAGAATTGCT
GTGTGTATAGTGGGTGGGGCTCGTAGGTTTGAACTAACTGGGCCTTCTGTAATACAGAAA
ATTCTGAAAGAGTATCCGAATTCTGATCTGTACCTTCATAGTCCGTTGGATTCTAATGCC
TACAAGCTTTCCTTGTTAAAAAATGCTCCTCGAATCTCCGCCATTAAAATTTTCAAGCCT
AAAACCATTAAAGAGACTGAGTTTCAGGTCCGAGTTCTCAGTGCTCGTGGCTCACCTAAT
GGTATTCAGGGCCTCCTGCAATATTTCAACCTGGTTGAGGGTTGCTTGACGATGATTCAA
GCCTACCAGCACAAGAACAACTTCACTTATGATTGGATAATCCGTACCCGAGTTGATGGA
TACTGGAACTCTCCACTATCACCCGAGGACTTCATTCCCGGCGCCTATTTAGTCCCTTCT
GGTTCATCCTACGGTGGCTTAAATGATCGCTTTGGCCTTGGTGACTACAACACTTCTGTA
GTAGCTCTTTCACGGCTCTCCTTGATTCCTGAGTTGGATGCAGCCAGATACCATCTCCTC
AACTCCGAGGGTGCATTCAAGGCCCAACTGACTATCCACAGAGTTCCCTGCATCTCTAAG
CGCCTCCCATTTTGTGTTGTATCAGATCGTAGCTATGATTTTCCACCACCCCGTTTTGGT
GTTCCAGTAGCAGCACTTTCTAGTCCAGGCCCATTAAGTGGTGCCAAGTGCCGGCCTTGC
ACACCTCCGTGCACTCACCACTGCGTTGGTCTTATGATGAACAAACTGTACAGAGGATGG
AGCTGGACCGACTGGGCCAATAACACCCTTCAGCTCTGTGATGCCCATGCCGAGTGGGAG
AGTGGTTGGCAGAAAATATTCGACCAAGTGGCAGGTAATAAACTAGCTGCAGCGAGACAA
CGAGTTGAAAATCTAAAAATGGAGCAGTGTGTGAAAGATTTCGCGGAATTAATGAAAAAA
ACTGCTTATTGGGAGGCTCCTCCAGTGTCTCAAATTTGTCGATTGGGTTTATCAGTGCCC
GTCTAA