Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025819
CDS Infomation

pacid=37473105 polypeptide=PGSC0003DMP400017601 locus=PGSC0003DMG400009972 ID=PGSC0003DMT400025819.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTTGTCAATCTTCAATCTTGAAGGAGTTGAGCTCAGAGAAAGATCAGCGTCAT
GGGGTGGTTAACGCACGACCTTCTAACGGCACCGGCGCCGGAGCTGCTGTCGGAGATGGT
GGGGTTCCGGTGTTTTCTGAGTTTTCGCTTTCTGAGCTGAAAGCAGCTACTAATAACTTC
AGTTCGGAGTTTATTGTTTCTGAAAGTGGAGAAAAGGCCCCGAATATGGTTTACAAGGGG
CGGTTGCAGAATCGGCGGTGGATCGCTGTTAAGAAGTTTACTAAATCGGCATGGCCTGAT
CCTAAACAGTTTGCGGATGAAGCATCAGGTGTTGGGAATTTGAGGCATAAAAGGCTGGCA
AATTTGATTGGGTACTGCTCTGATGGGGATGAGAGGTTGCTTGTAGCTGAGTACATGCCA
AATGATACACTTGCAAAGCATCTGTTTCACTGGGAGAATCAAACCCTTGAGTGGGCTATG
CGTTTAAGAGTGGCTCTATATATTGCTGAAGCATTAGACTACTGTAGCAGTGAAGGTCGA
CCACTATACCATGACTTGAATGCATATAGAGTTCTCTTTGACGAGAGTGGTGATCCCCGT
CTTTCTTGTTTTGGGCTGATGAAAAATAGCAGGGATGGTAAAAGTTATAGCACGAACCTT
GCGTATACACCTCCTGAGTATTTAAGAAATGGAAGAGTCACTCAAGAAAGTGTTGTTTTC
AGCTATGGAACTGTCCTTTTGGACTTGCTAAGTGGAAAACATATTCCTCCTGGTCATGCA
CTCGATATGATACGGGGAAAAAACATTCTTCTATTAATGGATTCACATTTGGAGGGAAAT
TTCTCTACAGAAGAGGCAACTGTTGTATTTGATCTGGCTTCACGATGCTTACAGTATGAA
CCCAGGGAGCGACCAAATACCAAAGACCTCGTTTCAACACTTGGTCCATTGCAAAGTAAA
CCTGATGTTTCATCTCATGTAATGTTGGGTATTCCTAAGAGTGAGGAAGCTCCACCAACT
CCACAGCACCCTCTTTCTGCAATGGGTGATGCTTGTTCGAGAATGGATCTCACAGCTATT
CATCAGATTTTGGTAATGACACATTATAAAGACGATGAAGGGACAAATGAGTTGTCTTTC
CAAGAGTGGACTCAACAAATGAGGGATATGTTGGAGGCAAGAAAGCGTGGAGACTTGGCA
TTTCGGGACAAGGACTTTAAAACTGCCATAGATTGCTATTCTCAGTTTGTAGATGTGGGA
ACGATGGTGTCTCCAACTGTTTATGCACGAAGAAGCCTTTGTTATCTCATGTGTGATCAA
CCAGATGCTGCCCTTAGAGATGCAATGCAAGCACAATGTGTTTACCCAGACTGGTCAACT
GCATTTTACATGCAGGCAGTTGCCCTATCCAAGCTAGACATGCACAAAGATGCAGCTGAC
ATGTTGAATGAGGCTGCAATTCTAGAAGAGAAAAGACGCGGTGGACGTGCATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400017601
PEP Infomation

pacid=37473105 transcript=PGSC0003DMT400025819 locus=PGSC0003DMG400009972 ID=PGSC0003DMT400025819.v4.03 annot-version=v4.03
Sequence

MGCCQSSILKELSSEKDQRHGVVNARPSNGTGAGAAVGDGGVPVFSEFSLSELKAATNNF
SSEFIVSESGEKAPNMVYKGRLQNRRWIAVKKFTKSAWPDPKQFADEASGVGNLRHKRLA
NLIGYCSDGDERLLVAEYMPNDTLAKHLFHWENQTLEWAMRLRVALYIAEALDYCSSEGR
PLYHDLNAYRVLFDESGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTQESVVF
SYGTVLLDLLSGKHIPPGHALDMIRGKNILLLMDSHLEGNFSTEEATVVFDLASRCLQYE
PRERPNTKDLVSTLGPLQSKPDVSSHVMLGIPKSEEAPPTPQHPLSAMGDACSRMDLTAI
HQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTAIDCYSQFVDVG
TMVSPTVYARRSLCYLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALSKLDMHKDAAD
MLNEAAILEEKRRGGRAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400025819
Transcript Infomation

pacid=37473105 locus=PGSC0003DMG400009972 ID=PGSC0003DMT400025819.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTTGTCAATCTTCAATCTTGAAGGAGTTGAGCTCAGAGAAAGATCAGCGTCAT
GGGGTGGTTAACGCACGACCTTCTAACGGCACCGGCGCCGGAGCTGCTGTCGGAGATGGT
GGGGTTCCGGTGTTTTCTGAGTTTTCGCTTTCTGAGCTGAAAGCAGCTACTAATAACTTC
AGTTCGGAGTTTATTGTTTCTGAAAGTGGAGAAAAGGCCCCGAATATGGTTTACAAGGGG
CGGTTGCAGAATCGGCGGTGGATCGCTGTTAAGAAGTTTACTAAATCGGCATGGCCTGAT
CCTAAACAGTTTGCGGATGAAGCATCAGGTGTTGGGAATTTGAGGCATAAAAGGCTGGCA
AATTTGATTGGGTACTGCTCTGATGGGGATGAGAGGTTGCTTGTAGCTGAGTACATGCCA
AATGATACACTTGCAAAGCATCTGTTTCACTGGGAGAATCAAACCCTTGAGTGGGCTATG
CGTTTAAGAGTGGCTCTATATATTGCTGAAGCATTAGACTACTGTAGCAGTGAAGGTCGA
CCACTATACCATGACTTGAATGCATATAGAGTTCTCTTTGACGAGAGTGGTGATCCCCGT
CTTTCTTGTTTTGGGCTGATGAAAAATAGCAGGGATGGTAAAAGTTATAGCACGAACCTT
GCGTATACACCTCCTGAGTATTTAAGAAATGGAAGAGTCACTCAAGAAAGTGTTGTTTTC
AGCTATGGAACTGTCCTTTTGGACTTGCTAAGTGGAAAACATATTCCTCCTGGTCATGCA
CTCGATATGATACGGGGAAAAAACATTCTTCTATTAATGGATTCACATTTGGAGGGAAAT
TTCTCTACAGAAGAGGCAACTGTTGTATTTGATCTGGCTTCACGATGCTTACAGTATGAA
CCCAGGGAGCGACCAAATACCAAAGACCTCGTTTCAACACTTGGTCCATTGCAAAGTAAA
CCTGATGTTTCATCTCATGTAATGTTGGGTATTCCTAAGAGTGAGGAAGCTCCACCAACT
CCACAGCACCCTCTTTCTGCAATGGGTGATGCTTGTTCGAGAATGGATCTCACAGCTATT
CATCAGATTTTGGTAATGACACATTATAAAGACGATGAAGGGACAAATGAGTTGTCTTTC
CAAGAGTGGACTCAACAAATGAGGGATATGTTGGAGGCAAGAAAGCGTGGAGACTTGGCA
TTTCGGGACAAGGACTTTAAAACTGCCATAGATTGCTATTCTCAGTTTGTAGATGTGGGA
ACGATGGTGTCTCCAACTGTTTATGCACGAAGAAGCCTTTGTTATCTCATGTGTGATCAA
CCAGATGCTGCCCTTAGAGATGCAATGCAAGCACAATGTGTTTACCCAGACTGGTCAACT
GCATTTTACATGCAGGCAGTTGCCCTATCCAAGCTAGACATGCACAAAGATGCAGCTGAC
ATGTTGAATGAGGCTGCAATTCTAGAAGAGAAAAGACGCGGTGGACGTGCATCTTGA