Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025800
CDS Infomation

pacid=37475753 polypeptide=PGSC0003DMP400017589 locus=PGSC0003DMG400009963 ID=PGSC0003DMT400025800.v4.03 annot-version=v4.03
Sequence

ATGGAGAGTGCACCGTCGACCGACGATGAGTTCGATTTGCAGAGTGAGCGTTTTGACGAC
AGTTACAGTCTCAGTGCTGACATCAGCGAATCGGAAACTTGTAGTAGCACGAGTACTTTC
TCTTGCCGTCAACAGGACGCTTCCACTTCTCTATCCTCTACTTCTACGCTTCATTTCAAC
TCCAATTCCGGTTTCGCTGAACTGCCTACTGTTATGTTGCCGGTCGTCGGAGGTAGACAC
GTCATCATTCCGGGTGAGAAACCGGATAAGCCTGAGATCGAGTTAACAGAAGTTGAATTG
ATGAAAGAGCGGTTTGCTAAACTACTGCTTGGGGAAGATATGTCTGGAGGAGGAAAAGGG
GTCTGTACTGCTTTTGCCATCTCCAATGCCATCACTAATCTAGCTGCTACAGTCTTCGGG
GAACTATGGAAGTTGGAGTCATTAGCGCCGCAAAAGAAATCGATGTGGTGTCGAGAGATG
GATTGGCTTCTATCTGTGAGTGATTCAATAGTAGAACTTGTACCTTCTGAGCAAGAGTTT
CCTGGTGGTGGGACTTTTGAGGTTATGGTCACTCAACCACGGTCAGACCTCTATGTAAAT
CTTCCAGCACTCAAGAAGCTAGATGCAATGCTAATTGGCATGTTGGATGCCTTTTCTGGC
TGTGAATTTCATTATGTCGACCGAGGGATACTTGTCGCTGATGGAGAAGATGTTGAAGCG
TATCCTTGTTCCCCGTCCTCTCATAGACCTTCCAGTAGGCTTGAAGAGAAGTGGTGGCTA
CCATTCCCAAAGGTCCCACCAAAAGGTTTGTTAGAAGAGACAAGGAAACGATTGCGGCAG
TGTAGGGAATGCACAAATCAAATTTTCAAGGCAGCTCAGGCGATCAATGCCAGCACACTA
TCTGAAATGGAAGTACCAAAAGACTACCTGGAGGGATTGCCAAAGAGTGGGAAGGCATCC
TTGGGGGAAATTCTCCACCGATATATTACTGCTGATCACTTCTCTCCCGAGTGCCTCTTT
GATTACTTGGATCTCTCATCAGAGTATACGACTTTGGAGATTGCAAACAGAATTGAAGCT
GCTATGCATGTATGGAAGCAAAAATGTGAAAAGAAGAACTTGAACCGGTCAAAATCTGGA
AAATCATCATGGGGTGGAACGGTAAAGGGACTTGTTGGTCTTGTGGAAAGATATCAACTC
TTGTCACAGCGAGCTGAGAACCTACTGAGGAACTTAAAGCTAAATTTCCCCGGCCTTCCA
CAAACTGCATTGGACATGACCAAGATTCAGTATAACAAGGATGTGGGACATTCAATCCTT
GAGAGCTACTCTAGAGTGTTGGAGAGTTTGGCCTTTAACTTGATGGCAAGGATTGAAGAT
CTACTATATGTAGATGATGCCACAAGGCGGCGTGCAGCTGAAGAGTCAGCAGCAATGCTC
GACCAGCAAGGATTCTTTAACGCCCAGTCCCTACAGAATCAGGTTCCTTGTGCGTCTAAT
TTTGCCCGAAAGAAGTCTCTCCCCTTTTCCTCAAAAGCTTTCACTTCCTTGGATATAGTA
GCTGAAAGCCCAGAGAGAACAGCTCATTCAATTGGGCATACTGTTCTTAGCAGCCCACGA
GCTGAGAAACACAAAGCACTCAGTTTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017589
PEP Infomation

pacid=37475753 transcript=PGSC0003DMT400025800 locus=PGSC0003DMG400009963 ID=PGSC0003DMT400025800.v4.03 annot-version=v4.03
Sequence

MESAPSTDDEFDLQSERFDDSYSLSADISESETCSSTSTFSCRQQDASTSLSSTSTLHFN
SNSGFAELPTVMLPVVGGRHVIIPGEKPDKPEIELTEVELMKERFAKLLLGEDMSGGGKG
VCTAFAISNAITNLAATVFGELWKLESLAPQKKSMWCREMDWLLSVSDSIVELVPSEQEF
PGGGTFEVMVTQPRSDLYVNLPALKKLDAMLIGMLDAFSGCEFHYVDRGILVADGEDVEA
YPCSPSSHRPSSRLEEKWWLPFPKVPPKGLLEETRKRLRQCRECTNQIFKAAQAINASTL
SEMEVPKDYLEGLPKSGKASLGEILHRYITADHFSPECLFDYLDLSSEYTTLEIANRIEA
AMHVWKQKCEKKNLNRSKSGKSSWGGTVKGLVGLVERYQLLSQRAENLLRNLKLNFPGLP
QTALDMTKIQYNKDVGHSILESYSRVLESLAFNLMARIEDLLYVDDATRRRAAEESAAML
DQQGFFNAQSLQNQVPCASNFARKKSLPFSSKAFTSLDIVAESPERTAHSIGHTVLSSPR
AEKHKALSF*

Transcript Sequence

Transcript ID

PGSC0003DMT400025800
Transcript Infomation

pacid=37475753 locus=PGSC0003DMG400009963 ID=PGSC0003DMT400025800.v4.03 annot-version=v4.03
Sequence

ATGGAGAGTGCACCGTCGACCGACGATGAGTTCGATTTGCAGAGTGAGCGTTTTGACGAC
AGTTACAGTCTCAGTGCTGACATCAGCGAATCGGAAACTTGTAGTAGCACGAGTACTTTC
TCTTGCCGTCAACAGGACGCTTCCACTTCTCTATCCTCTACTTCTACGCTTCATTTCAAC
TCCAATTCCGGTTTCGCTGAACTGCCTACTGTTATGTTGCCGGTCGTCGGAGGTAGACAC
GTCATCATTCCGGGTGAGAAACCGGATAAGCCTGAGATCGAGTTAACAGAAGTTGAATTG
ATGAAAGAGCGGTTTGCTAAACTACTGCTTGGGGAAGATATGTCTGGAGGAGGAAAAGGG
GTCTGTACTGCTTTTGCCATCTCCAATGCCATCACTAATCTAGCTGCTACAGTCTTCGGG
GAACTATGGAAGTTGGAGTCATTAGCGCCGCAAAAGAAATCGATGTGGTGTCGAGAGATG
GATTGGCTTCTATCTGTGAGTGATTCAATAGTAGAACTTGTACCTTCTGAGCAAGAGTTT
CCTGGTGGTGGGACTTTTGAGGTTATGGTCACTCAACCACGGTCAGACCTCTATGTAAAT
CTTCCAGCACTCAAGAAGCTAGATGCAATGCTAATTGGCATGTTGGATGCCTTTTCTGGC
TGTGAATTTCATTATGTCGACCGAGGGATACTTGTCGCTGATGGAGAAGATGTTGAAGCG
TATCCTTGTTCCCCGTCCTCTCATAGACCTTCCAGTAGGCTTGAAGAGAAGTGGTGGCTA
CCATTCCCAAAGGTCCCACCAAAAGGTTTGTTAGAAGAGACAAGGAAACGATTGCGGCAG
TGTAGGGAATGCACAAATCAAATTTTCAAGGCAGCTCAGGCGATCAATGCCAGCACACTA
TCTGAAATGGAAGTACCAAAAGACTACCTGGAGGGATTGCCAAAGAGTGGGAAGGCATCC
TTGGGGGAAATTCTCCACCGATATATTACTGCTGATCACTTCTCTCCCGAGTGCCTCTTT
GATTACTTGGATCTCTCATCAGAGTATACGACTTTGGAGATTGCAAACAGAATTGAAGCT
GCTATGCATGTATGGAAGCAAAAATGTGAAAAGAAGAACTTGAACCGGTCAAAATCTGGA
AAATCATCATGGGGTGGAACGGTAAAGGGACTTGTTGGTCTTGTGGAAAGATATCAACTC
TTGTCACAGCGAGCTGAGAACCTACTGAGGAACTTAAAGCTAAATTTCCCCGGCCTTCCA
CAAACTGCATTGGACATGACCAAGATTCAGTATAACAAGGATGTGGGACATTCAATCCTT
GAGAGCTACTCTAGAGTGTTGGAGAGTTTGGCCTTTAACTTGATGGCAAGGATTGAAGAT
CTACTATATGTAGATGATGCCACAAGGCGGCGTGCAGCTGAAGAGTCAGCAGCAATGCTC
GACCAGCAAGGATTCTTTAACGCCCAGTCCCTACAGAATCAGGTTCCTTGTGCGTCTAAT
TTTGCCCGAAAGAAGTCTCTCCCCTTTTCCTCAAAAGCTTTCACTTCCTTGGATATAGTA
GCTGAAAGCCCAGAGAGAACAGCTCATTCAATTGGGCATACTGTTCTTAGCAGCCCACGA
GCTGAGAAACACAAAGCACTCAGTTTTTAA