Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025715
CDS Infomation

pacid=37472446 polypeptide=PGSC0003DMP400017529 locus=PGSC0003DMG401009929 ID=PGSC0003DMT400025715.v4.03 annot-version=v4.03
Sequence

ATGACACTGCTTCAGCTTCCCCATCCATCGTCCTCCGTCCCTAAAGACCAAAGGTTGTAT
CGCAATGCAAGTGCACTCGATCCTTTTTCGCGTCACAGGGCTTCATGGCAAGAGCTTGCC
GGCGTTCTGGTATTCTCAGCGATTCCTTTCACTGCTGTCAAAGCTATTGCCAACAGTACC
TTCGGCGAAACACTCCGTAAACGATTGGAAGAGAGAAAGAAGGTTGCTGTAGAGAATTCT
GCAAAGTTCAAAGCACTTGCACAAATGGCAAGAAACGATAGTATCTGGTATGGAGAAGAT
CGCCCCCGCTGGCTTGGTCCAATTTCTTATGACTATCCGGCTTATCTTAATGGGGAGCTA
CCCGGGGACTATGGATTTGATATCTGCGGGTTGAGCAAGGATCCCGTGGCCCTTCAAAAC
TACTTTAATTATGAAATATTGCATGGACGTTGGGCTATGCTGGCTGCTCTTGGTGCTTTG
ATTCCAGAACTGTTAAACCTGACAGGACTTTTCCAGTTTGTGGAACCTGTTTGGTGGCGA
GTGGGCTACTCAAAGCTTAAGGGAGATACACTTGACTATTTAGGGATCCCTGGACTCCAT
TTAGCTGGAAGTCAAGGAGTCATTGTCATAGCCATTTGCCAAGTCCTTTTGATGGTTGGA
CCAGAATATGCAAGGTATTGTGGGATTGAGGCTTTGGAACCATTAGGACTTTACTTGCCT
GGTGACATCAATTATCCTGGAGGTGTTCTTTTTGATCCACTGAATCTCTCTAAAGATCCA
ATGGCTTTTGAAGAGCTAAAGGTGAAAGAAATAAAAAATGGGCGCCTTGCTATGGTTGCC
TGGTTAGGCTTTTATGTCCAAGCCGCTCTTACAGGTAAAGGCCCTGTGCAAAACCTTCTG
GAGCATATCTCAGATCCATTCCACAATAACTTGCTCTCCATTCTAAAGTCTCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017529
PEP Infomation

pacid=37472446 transcript=PGSC0003DMT400025715 locus=PGSC0003DMG401009929 ID=PGSC0003DMT400025715.v4.03 annot-version=v4.03
Sequence

MTLLQLPHPSSSVPKDQRLYRNASALDPFSRHRASWQELAGVLVFSAIPFTAVKAIANST
FGETLRKRLEERKKVAVENSAKFKALAQMARNDSIWYGEDRPRWLGPISYDYPAYLNGEL
PGDYGFDICGLSKDPVALQNYFNYEILHGRWAMLAALGALIPELLNLTGLFQFVEPVWWR
VGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVLLMVGPEYARYCGIEALEPLGLYLP
GDINYPGGVLFDPLNLSKDPMAFEELKVKEIKNGRLAMVAWLGFYVQAALTGKGPVQNLL
EHISDPFHNNLLSILKSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400025715
Transcript Infomation

pacid=37472446 locus=PGSC0003DMG401009929 ID=PGSC0003DMT400025715.v4.03 annot-version=v4.03
Sequence

ATGACACTGCTTCAGCTTCCCCATCCATCGTCCTCCGTCCCTAAAGACCAAAGGTTGTAT
CGCAATGCAAGTGCACTCGATCCTTTTTCGCGTCACAGGGCTTCATGGCAAGAGCTTGCC
GGCGTTCTGGTATTCTCAGCGATTCCTTTCACTGCTGTCAAAGCTATTGCCAACAGTACC
TTCGGCGAAACACTCCGTAAACGATTGGAAGAGAGAAAGAAGGTTGCTGTAGAGAATTCT
GCAAAGTTCAAAGCACTTGCACAAATGGCAAGAAACGATAGTATCTGGTATGGAGAAGAT
CGCCCCCGCTGGCTTGGTCCAATTTCTTATGACTATCCGGCTTATCTTAATGGGGAGCTA
CCCGGGGACTATGGATTTGATATCTGCGGGTTGAGCAAGGATCCCGTGGCCCTTCAAAAC
TACTTTAATTATGAAATATTGCATGGACGTTGGGCTATGCTGGCTGCTCTTGGTGCTTTG
ATTCCAGAACTGTTAAACCTGACAGGACTTTTCCAGTTTGTGGAACCTGTTTGGTGGCGA
GTGGGCTACTCAAAGCTTAAGGGAGATACACTTGACTATTTAGGGATCCCTGGACTCCAT
TTAGCTGGAAGTCAAGGAGTCATTGTCATAGCCATTTGCCAAGTCCTTTTGATGGTTGGA
CCAGAATATGCAAGGTATTGTGGGATTGAGGCTTTGGAACCATTAGGACTTTACTTGCCT
GGTGACATCAATTATCCTGGAGGTGTTCTTTTTGATCCACTGAATCTCTCTAAAGATCCA
ATGGCTTTTGAAGAGCTAAAGGTGAAAGAAATAAAAAATGGGCGCCTTGCTATGGTTGCC
TGGTTAGGCTTTTATGTCCAAGCCGCTCTTACAGGTAAAGGCCCTGTGCAAAACCTTCTG
GAGCATATCTCAGATCCATTCCACAATAACTTGCTCTCCATTCTAAAGTCTCTGTAA