Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025687
CDS Infomation

pacid=37473781 polypeptide=PGSC0003DMP400017506 locus=PGSC0003DMG400009917 ID=PGSC0003DMT400025687.v4.03 annot-version=v4.03
Sequence

ATGGCGATTCGTCTCTATTTGTTGTTTTCGTTTTTCGTTTTACTTGCTCAATGGTCCCCT
GCACTTTCCGATCTAGTCATCTCCAAACTTGATCGAAAGATTGACCTAACCTCTCAAGTA
GTGCGTGTGACTGCAAATTTGAAGATAGAAAATACCGGTAATGATCCAATTTCAGAGGTT
TTGTTACCATTTGGAGATCACCAGGCAAAAGATTTAGCATTTTTAGTGGCAACAACCAGT
GAAGGGAAAGGGAAAACTAAAACTTCTTCCAGTAGCCTACCTATCAAAGTTGTTAACCCT
AAAGGCATGCCACCATCATTGACTTGGTACTCTGTCTCCCTACCGAAGGAGCTGGCAAAG
GGGAAGAGCCTGAATTTGGAAGTCAGGACTGCATTTACTCATGCACTACAGCCATTTCCT
GAGAAAATTACTCAAGCTGATATCCAGCTTCTTGTGTTCCAGGAGAGTGCCTACTATATT
TCTCCTTATGCAGTTAATGTCCAATCTCTCAGTGTCAGATTACCCGAACCAAAAGTCGAA
TCATACACTAAGTTAGAGAACACCAAATTTTCTGGTTCAGAAATTAAATATGGACCTTAT
GAGAATCTTCCTCCTTTCTCATTCTCGCATATAGCAGTACACTTCGTGAGCAATAAGCCA
TTCGCAGTTGCCCAGGAGTTAGTGCGAGAGATTGAAGTCTCTCATTGGGGAAATGTTCAG
ATCACAGAGCATTACAACCTTGTCAATGCTGGTGCCAGAAGCAGTGGGGAGTTTTCAAGG
CTAGAGTACCAGGCCCGACCACATCTCAGAGGTGCATCGTCATTCGGACATCTTGTTGCC
AAATTGCCTCCAAGAGCCCATTCCATTTATTACAGAGATGAAATTGGCAATATATCAACA
TCCAATTTATGGGGTGACTCATCAAAGACATTGCTACAAATTGAACCTAGGTATCCAATG
TTTGGTGGCTGGAAAACTTCTTTTACCATCGGCTATGGGCTGCCCCTTAAGGACTATTTG
TTCCGTGCAGAGGGGAAACGTTTCTTAAATATATCTTTTGGTTGCCCAATTGAGGAGGTG
GTAGTTGAAAACCTTGTTGTGAAGGTTGTTCTGCCAGAAGGTTCAAAGGATATTTCTGTA
TCGGTCCCTTTTCCTGTCAAAGAGTCGAGAGAGACGAAATTTTCCCATTTGGATATGATT
GGTAGACCAGTGGTTGTTCTTGAAAAGACCAATGCTGTGCATGAGCATAACCAATATTTC
CAGGTCTATTACAGGTTCAGCAATCTGTCACTGCTTAGAGAACCAATGATGTTAATTTCT
GGGTTTTTCTTCTTATTCGTTGCATGTATCATATATATGCATGCGGACTTGACAATCTCG
AAGTCTTCTCCTTCTTATCTTGCAAAACTGCAGTGGGATGAGGTGCAGACTGCTCTTCAG
CAGATCCAGAGCATAATGAACCGTTGTTTAGGCATTCACGATAAACTTGAAGCATCATTA
CGAGAGCTGTCAAGGACTGGTGATGTGCAAGCATGCAAAGCTGCTCGTAAATCAGCTGAT
AATATGTTGAAGGAGCTTTCGAAGGATTTAAAGCCTTCACTCTCATTTTTGCAGTCTTCT
CCGCTGTCTGCTTCATTATATTCAAAGGTTGAGGATCTTGTTGCAAAGGAGAAAGAGCTG
CAGGAGAAGCTGATAGTGAAACACACCACAGTTACAGATAGTTATGAAAAGAAGTCTCGT
GGTCGGGATATTGAGAACCGTATTGCACCAATCCAGCAAAGAATTACAGCCTTGAGACAG
GAAGTTGATGATCTTCTGGAAATAATTGATGAGATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400017506
PEP Infomation

pacid=37473781 transcript=PGSC0003DMT400025687 locus=PGSC0003DMG400009917 ID=PGSC0003DMT400025687.v4.03 annot-version=v4.03
Sequence

MAIRLYLLFSFFVLLAQWSPALSDLVISKLDRKIDLTSQVVRVTANLKIENTGNDPISEV
LLPFGDHQAKDLAFLVATTSEGKGKTKTSSSSLPIKVVNPKGMPPSLTWYSVSLPKELAK
GKSLNLEVRTAFTHALQPFPEKITQADIQLLVFQESAYYISPYAVNVQSLSVRLPEPKVE
SYTKLENTKFSGSEIKYGPYENLPPFSFSHIAVHFVSNKPFAVAQELVREIEVSHWGNVQ
ITEHYNLVNAGARSSGEFSRLEYQARPHLRGASSFGHLVAKLPPRAHSIYYRDEIGNIST
SNLWGDSSKTLLQIEPRYPMFGGWKTSFTIGYGLPLKDYLFRAEGKRFLNISFGCPIEEV
VVENLVVKVVLPEGSKDISVSVPFPVKESRETKFSHLDMIGRPVVVLEKTNAVHEHNQYF
QVYYRFSNLSLLREPMMLISGFFFLFVACIIYMHADLTISKSSPSYLAKLQWDEVQTALQ
QIQSIMNRCLGIHDKLEASLRELSRTGDVQACKAARKSADNMLKELSKDLKPSLSFLQSS
PLSASLYSKVEDLVAKEKELQEKLIVKHTTVTDSYEKKSRGRDIENRIAPIQQRITALRQ
EVDDLLEIIDEI*

Transcript Sequence

Transcript ID

PGSC0003DMT400025687
Transcript Infomation

pacid=37473781 locus=PGSC0003DMG400009917 ID=PGSC0003DMT400025687.v4.03 annot-version=v4.03
Sequence

ATGGCGATTCGTCTCTATTTGTTGTTTTCGTTTTTCGTTTTACTTGCTCAATGGTCCCCT
GCACTTTCCGATCTAGTCATCTCCAAACTTGATCGAAAGATTGACCTAACCTCTCAAGTA
GTGCGTGTGACTGCAAATTTGAAGATAGAAAATACCGGTAATGATCCAATTTCAGAGGTT
TTGTTACCATTTGGAGATCACCAGGCAAAAGATTTAGCATTTTTAGTGGCAACAACCAGT
GAAGGGAAAGGGAAAACTAAAACTTCTTCCAGTAGCCTACCTATCAAAGTTGTTAACCCT
AAAGGCATGCCACCATCATTGACTTGGTACTCTGTCTCCCTACCGAAGGAGCTGGCAAAG
GGGAAGAGCCTGAATTTGGAAGTCAGGACTGCATTTACTCATGCACTACAGCCATTTCCT
GAGAAAATTACTCAAGCTGATATCCAGCTTCTTGTGTTCCAGGAGAGTGCCTACTATATT
TCTCCTTATGCAGTTAATGTCCAATCTCTCAGTGTCAGATTACCCGAACCAAAAGTCGAA
TCATACACTAAGTTAGAGAACACCAAATTTTCTGGTTCAGAAATTAAATATGGACCTTAT
GAGAATCTTCCTCCTTTCTCATTCTCGCATATAGCAGTACACTTCGTGAGCAATAAGCCA
TTCGCAGTTGCCCAGGAGTTAGTGCGAGAGATTGAAGTCTCTCATTGGGGAAATGTTCAG
ATCACAGAGCATTACAACCTTGTCAATGCTGGTGCCAGAAGCAGTGGGGAGTTTTCAAGG
CTAGAGTACCAGGCCCGACCACATCTCAGAGGTGCATCGTCATTCGGACATCTTGTTGCC
AAATTGCCTCCAAGAGCCCATTCCATTTATTACAGAGATGAAATTGGCAATATATCAACA
TCCAATTTATGGGGTGACTCATCAAAGACATTGCTACAAATTGAACCTAGGTATCCAATG
TTTGGTGGCTGGAAAACTTCTTTTACCATCGGCTATGGGCTGCCCCTTAAGGACTATTTG
TTCCGTGCAGAGGGGAAACGTTTCTTAAATATATCTTTTGGTTGCCCAATTGAGGAGGTG
GTAGTTGAAAACCTTGTTGTGAAGGTTGTTCTGCCAGAAGGTTCAAAGGATATTTCTGTA
TCGGTCCCTTTTCCTGTCAAAGAGTCGAGAGAGACGAAATTTTCCCATTTGGATATGATT
GGTAGACCAGTGGTTGTTCTTGAAAAGACCAATGCTGTGCATGAGCATAACCAATATTTC
CAGGTCTATTACAGGTTCAGCAATCTGTCACTGCTTAGAGAACCAATGATGTTAATTTCT
GGGTTTTTCTTCTTATTCGTTGCATGTATCATATATATGCATGCGGACTTGACAATCTCG
AAGTCTTCTCCTTCTTATCTTGCAAAACTGCAGTGGGATGAGGTGCAGACTGCTCTTCAG
CAGATCCAGAGCATAATGAACCGTTGTTTAGGCATTCACGATAAACTTGAAGCATCATTA
CGAGAGCTGTCAAGGACTGGTGATGTGCAAGCATGCAAAGCTGCTCGTAAATCAGCTGAT
AATATGTTGAAGGAGCTTTCGAAGGATTTAAAGCCTTCACTCTCATTTTTGCAGTCTTCT
CCGCTGTCTGCTTCATTATATTCAAAGGTTGAGGATCTTGTTGCAAAGGAGAAAGAGCTG
CAGGAGAAGCTGATAGTGAAACACACCACAGTTACAGATAGTTATGAAAAGAAGTCTCGT
GGTCGGGATATTGAGAACCGTATTGCACCAATCCAGCAAAGAATTACAGCCTTGAGACAG
GAAGTTGATGATCTTCTGGAAATAATTGATGAGATATAA