Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025671
CDS Infomation

pacid=37475534 polypeptide=PGSC0003DMP400017491 locus=PGSC0003DMG400009912 ID=PGSC0003DMT400025671.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGGGCGACAATGTACGCACAATAGTCAAGTTCTTATCAAATGAACAATCCAAA
GAACGAGAGGCAGCCATTTCTTTGCTGTATGAGCTATCCAAATCGAAAAATTTGTGTGGA
AAGATCGGTTCAGTTAATGGGGCCATTCTGATTCTGGTTGGGATGGCCAGCAGCAAATCT
GAGAATCTTGTGACTGTTGAAAAGGCTGAGAATACTCTGGAGAATCTGGAAAAGTGTGAG
ATTAATGTAAAACAAATGGCAGAAAATGGCCGGCTGCAACCCCTATTAACTCTACTACTT
GAAGGATCGCCAGAGACCAAACTCTCCATGGCTGTTTTCCTTGGTGAGCTGGTTCTTAAT
AATGATGTGAAAGTGTTAGTGGCTAGAACTGTTGGTTCATCACTGATCAGCATCATGAGA
TATGGTGATATGTCATCAAGGGAGGCTGCTCTAAAATCTCTAAATCAAATCTCGTCTGAT
GAGTCTAGTGCCAAGATCCTCATAGAGGCAGGTATACTTCCCCCTCTCGTCAAAGATCTA
TTCTTTGTTGGGGCCAACCAATTGCCCATGAAACTGAAAGAGGTCTCTGCCACAATTCTT
GCAAATATCGTCAACACAGGTTATGATTTTGATTCAGTTCCAGTTGGATCTGAACATCAG
ACTCTTGTCTCAGAGGACATAGTTCACAACTTTCTACATCTTATTAGCAACACTGGTCCT
GCAATAGAATGCAAGCTTCTCCAGGTTCTTTTTGGACTCACGAGTTCTCCCACAACTGTT
TTTAATGTTGTTTCTGCCATTAAAAGCTCAGCTGCTACTATTAGTTTGGTTCAGTTTATA
GAGGCTCCACAGAAAGATCTTCGAGTAGCTTCGATAAAGCTTCTGCGGAACCTCTCTCCA
CACATGGGTCAAGAACTTGCTCGTTGCTTACGTGGTACATCAGGTCAGCTTGGTAGTCTA
ATTAAAGTCATATCAGAGAACACTGGTATAACCGAGGAGCAAGCTGCAGCAGTTGGACTT
GTAGCTGATCTCCCTGAAAGAGATAGGGGACTTACAAGGCAAATGCTAGATGAAGGTGCT
TTCCAGCTGGCAATCTCCAGGATTGTCAGTATCCGACAAGGAGAGACAAGAGGGAATCGC
TTTGTTACGCCATATCTAGAAGGGCTCGTGAAGGTTCTCTCAAGGATCACATTTGTTTTA
AATGATGAGCCTAATGCTGTTTCACTTTGTCGTGAACAGAATGTTGCTGCACTCTTCATT
GAACTTTTGCAGACCAATGGACTTGACAATGTGCAGATGGTTTCCGCCATGGCTTTGGAG
AACTTATCTCAAGAATCCAAAAACTTGACCAAATTGCCCGAGATACCAAAGCCAGGTTTT
TGTGTCTCGATCTTCCCTTGTTTGAGCAAACCACCAGTTATAACAGGATTGTGTAAGGTC
CATCGTGGGACATGCTCTCTGAGAGACACCTTCTGTCTCTTGGAAGGACAAGCGGTAGAC
AAGTTGGTGGCACTTCTGGACCACACAAATGAAAAGGTCGTTGAGGCATCACTTGCAGCT
GTATGCACTTTGTTAGATGATGGAGTTGATATTGAACAAGGTGTCCATGAATTGTGTGAG
GCTGAAGGAATCAAACCTATACTGCTTGTGTTACTTGAGAAGCGGACTGAGACTCTGCGC
AGAAGAGCAGTTTGGGCAGTTGAAAGATTACTTCGTACAGAGGAGATCTCCTTTGAAGTT
TCTGGTGATCCAAATGTGAGCACAGCCCTCGTAGATGCTTTTCAACATGGTGATTATAGG
ACACGACAGATTGCTGAGCGGGCACTGAAGCATGTTGACAGAATTCCAAACTTCTCCGGC
GTATTCCCTAACACAGGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400017491
PEP Infomation

pacid=37475534 transcript=PGSC0003DMT400025671 locus=PGSC0003DMG400009912 ID=PGSC0003DMT400025671.v4.03 annot-version=v4.03
Sequence

MAEGDNVRTIVKFLSNEQSKEREAAISLLYELSKSKNLCGKIGSVNGAILILVGMASSKS
ENLVTVEKAENTLENLEKCEINVKQMAENGRLQPLLTLLLEGSPETKLSMAVFLGELVLN
NDVKVLVARTVGSSLISIMRYGDMSSREAALKSLNQISSDESSAKILIEAGILPPLVKDL
FFVGANQLPMKLKEVSATILANIVNTGYDFDSVPVGSEHQTLVSEDIVHNFLHLISNTGP
AIECKLLQVLFGLTSSPTTVFNVVSAIKSSAATISLVQFIEAPQKDLRVASIKLLRNLSP
HMGQELARCLRGTSGQLGSLIKVISENTGITEEQAAAVGLVADLPERDRGLTRQMLDEGA
FQLAISRIVSIRQGETRGNRFVTPYLEGLVKVLSRITFVLNDEPNAVSLCREQNVAALFI
ELLQTNGLDNVQMVSAMALENLSQESKNLTKLPEIPKPGFCVSIFPCLSKPPVITGLCKV
HRGTCSLRDTFCLLEGQAVDKLVALLDHTNEKVVEASLAAVCTLLDDGVDIEQGVHELCE
AEGIKPILLVLLEKRTETLRRRAVWAVERLLRTEEISFEVSGDPNVSTALVDAFQHGDYR
TRQIAERALKHVDRIPNFSGVFPNTG*

Transcript Sequence

Transcript ID

PGSC0003DMT400025671
Transcript Infomation

pacid=37475534 locus=PGSC0003DMG400009912 ID=PGSC0003DMT400025671.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGGGCGACAATGTACGCACAATAGTCAAGTTCTTATCAAATGAACAATCCAAA
GAACGAGAGGCAGCCATTTCTTTGCTGTATGAGCTATCCAAATCGAAAAATTTGTGTGGA
AAGATCGGTTCAGTTAATGGGGCCATTCTGATTCTGGTTGGGATGGCCAGCAGCAAATCT
GAGAATCTTGTGACTGTTGAAAAGGCTGAGAATACTCTGGAGAATCTGGAAAAGTGTGAG
ATTAATGTAAAACAAATGGCAGAAAATGGCCGGCTGCAACCCCTATTAACTCTACTACTT
GAAGGATCGCCAGAGACCAAACTCTCCATGGCTGTTTTCCTTGGTGAGCTGGTTCTTAAT
AATGATGTGAAAGTGTTAGTGGCTAGAACTGTTGGTTCATCACTGATCAGCATCATGAGA
TATGGTGATATGTCATCAAGGGAGGCTGCTCTAAAATCTCTAAATCAAATCTCGTCTGAT
GAGTCTAGTGCCAAGATCCTCATAGAGGCAGGTATACTTCCCCCTCTCGTCAAAGATCTA
TTCTTTGTTGGGGCCAACCAATTGCCCATGAAACTGAAAGAGGTCTCTGCCACAATTCTT
GCAAATATCGTCAACACAGGTTATGATTTTGATTCAGTTCCAGTTGGATCTGAACATCAG
ACTCTTGTCTCAGAGGACATAGTTCACAACTTTCTACATCTTATTAGCAACACTGGTCCT
GCAATAGAATGCAAGCTTCTCCAGGTTCTTTTTGGACTCACGAGTTCTCCCACAACTGTT
TTTAATGTTGTTTCTGCCATTAAAAGCTCAGCTGCTACTATTAGTTTGGTTCAGTTTATA
GAGGCTCCACAGAAAGATCTTCGAGTAGCTTCGATAAAGCTTCTGCGGAACCTCTCTCCA
CACATGGGTCAAGAACTTGCTCGTTGCTTACGTGGTACATCAGGTCAGCTTGGTAGTCTA
ATTAAAGTCATATCAGAGAACACTGGTATAACCGAGGAGCAAGCTGCAGCAGTTGGACTT
GTAGCTGATCTCCCTGAAAGAGATAGGGGACTTACAAGGCAAATGCTAGATGAAGGTGCT
TTCCAGCTGGCAATCTCCAGGATTGTCAGTATCCGACAAGGAGAGACAAGAGGGAATCGC
TTTGTTACGCCATATCTAGAAGGGCTCGTGAAGGTTCTCTCAAGGATCACATTTGTTTTA
AATGATGAGCCTAATGCTGTTTCACTTTGTCGTGAACAGAATGTTGCTGCACTCTTCATT
GAACTTTTGCAGACCAATGGACTTGACAATGTGCAGATGGTTTCCGCCATGGCTTTGGAG
AACTTATCTCAAGAATCCAAAAACTTGACCAAATTGCCCGAGATACCAAAGCCAGGTTTT
TGTGTCTCGATCTTCCCTTGTTTGAGCAAACCACCAGTTATAACAGGATTGTGTAAGGTC
CATCGTGGGACATGCTCTCTGAGAGACACCTTCTGTCTCTTGGAAGGACAAGCGGTAGAC
AAGTTGGTGGCACTTCTGGACCACACAAATGAAAAGGTCGTTGAGGCATCACTTGCAGCT
GTATGCACTTTGTTAGATGATGGAGTTGATATTGAACAAGGTGTCCATGAATTGTGTGAG
GCTGAAGGAATCAAACCTATACTGCTTGTGTTACTTGAGAAGCGGACTGAGACTCTGCGC
AGAAGAGCAGTTTGGGCAGTTGAAAGATTACTTCGTACAGAGGAGATCTCCTTTGAAGTT
TCTGGTGATCCAAATGTGAGCACAGCCCTCGTAGATGCTTTTCAACATGGTGATTATAGG
ACACGACAGATTGCTGAGCGGGCACTGAAGCATGTTGACAGAATTCCAAACTTCTCCGGC
GTATTCCCTAACACAGGCTGA