Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025653
CDS Infomation

pacid=37471944 polypeptide=PGSC0003DMP400017481 locus=PGSC0003DMG400009906 ID=PGSC0003DMT400025653.v4.03 annot-version=v4.03
Sequence

ATGGATCCTTACAAGTATCGTCCTTCAAGTGCTGCCAATTCCCCCTTCATGACAACTAAT
TCTGGTGCTCCAGTGTATAACAACAATTCTTCCTTGACTGTTGGAACTAGAGGGCCAATC
CTTCTCGAGGATTATCATCTGCTGGAGAAGCTTGCCAATTTTGATCGTGAGAGAATCCCA
GAGCGTGTTGTTCATGCCAGAGGTGCCAGTGCCAAGGGTTTCTTTGAGGTCACACATGAT
ATATCCCATCTTACATGTGCTGATTTTCTTCGAGCTCCTGGGGTCCAGACACCTGTTATT
GTGAGGTTCTCTACTGTTATCCACGAGCGTGGAAGCCCTGAAACCCTCAGGGACCCCAGA
GGATTTGCTGTAAAATTTTACACCAGAGAGGGTAACTTTGATCTGGTTGGAAACAACTTC
CCTGTCTTCTTCGTCCGTGATGGAATGAAGTTCCCTGACATGGTTCATGCCCTGAAACCA
AATCCAAAGTCCCACATTCAGGAGAACTGGAGGATCCTTGATTTCTTCTCTCACCATCCA
GAAAGTCTTCATATGTTCAGTTTCCTGTTTGATGATCTGGGCATTCCACAAGATTACAGG
CACATGGATGGTTTCGGTGTTAATACCTACATGCTGATCAACAAAGCTGGGAAAGCACAG
TATGTGAAATTCCATTGGAAGCCAACTTGTGGAGTCAAATGCTTGTTGGATGAAGAAGCT
ATTAAGGTCGGTGGAGCAAATCATAGTCATGCCACCAAGGATCTCTATGATTCAATTTCT
GCTGGGAACTATCCAGAGTGGAAACTGTTCATCCAAACTATTGATCCTGATCATGAAGAC
AGATTCGACTTTGACCCCTTAGATGTAACCAAGATCTGGCCTGAGGACATCTTGCCATTA
CAGCCAGTTGGTCGCTTGGTATTGAATAAGAACATCGATAACTTCTTTGCAGAGAATGAG
CAGCTTGCTTTTTGCCCTGCCATTATTGTCCCTGGTGTTTACTATTCGGATGATAAGCTT
CTCCAAACTAGGGTATTCTCATATGCTGATACCCAGAGACACCGCCTTGGTCCAAACTAT
CTGCAGCTCCCAGTTAATGCTCCCAAGTGTGCTCATCACAATAATCACCATGAAGGTTTC
ATGAATTTCATGCACCGTGATGAAGAGGTCAACTATTTCCCCTCAAGGCTTGATCCTTGT
CGTCATGCAGAGCAGTACCCTATTCCTCCTCGTGTCTTGACAGGAAAACGCGAAAAGGTC
ATCATTGAGAAAGAGAACAACTTTAAGCAGCCAGGAGAACATTACAGATCTTGGGCACCG
GGCAGGCAAGAAAGATTTGTGTGCAGATGGGTTGATGCTCTATCTGATCTTCGTGCCACT
CATGAAATTCGCAGTATTTGGATCTCATACTGGTCACAGGCTGACAAGTCTCTTGGTCAG
AAGCTCGCGTCTCGTCTCAATATAAGGCCTACAATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400017481
PEP Infomation

pacid=37471944 transcript=PGSC0003DMT400025653 locus=PGSC0003DMG400009906 ID=PGSC0003DMT400025653.v4.03 annot-version=v4.03
Sequence

MDPYKYRPSSAANSPFMTTNSGAPVYNNNSSLTVGTRGPILLEDYHLLEKLANFDRERIP
ERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPR
GFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHP
ESLHMFSFLFDDLGIPQDYRHMDGFGVNTYMLINKAGKAQYVKFHWKPTCGVKCLLDEEA
IKVGGANHSHATKDLYDSISAGNYPEWKLFIQTIDPDHEDRFDFDPLDVTKIWPEDILPL
QPVGRLVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRVFSYADTQRHRLGPNY
LQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRLDPCRHAEQYPIPPRVLTGKREKV
IIEKENNFKQPGEHYRSWAPGRQERFVCRWVDALSDLRATHEIRSIWISYWSQADKSLGQ
KLASRLNIRPTM*

Transcript Sequence

Transcript ID

PGSC0003DMT400025653
Transcript Infomation

pacid=37471944 locus=PGSC0003DMG400009906 ID=PGSC0003DMT400025653.v4.03 annot-version=v4.03
Sequence

ATGGATCCTTACAAGTATCGTCCTTCAAGTGCTGCCAATTCCCCCTTCATGACAACTAAT
TCTGGTGCTCCAGTGTATAACAACAATTCTTCCTTGACTGTTGGAACTAGAGGGCCAATC
CTTCTCGAGGATTATCATCTGCTGGAGAAGCTTGCCAATTTTGATCGTGAGAGAATCCCA
GAGCGTGTTGTTCATGCCAGAGGTGCCAGTGCCAAGGGTTTCTTTGAGGTCACACATGAT
ATATCCCATCTTACATGTGCTGATTTTCTTCGAGCTCCTGGGGTCCAGACACCTGTTATT
GTGAGGTTCTCTACTGTTATCCACGAGCGTGGAAGCCCTGAAACCCTCAGGGACCCCAGA
GGATTTGCTGTAAAATTTTACACCAGAGAGGGTAACTTTGATCTGGTTGGAAACAACTTC
CCTGTCTTCTTCGTCCGTGATGGAATGAAGTTCCCTGACATGGTTCATGCCCTGAAACCA
AATCCAAAGTCCCACATTCAGGAGAACTGGAGGATCCTTGATTTCTTCTCTCACCATCCA
GAAAGTCTTCATATGTTCAGTTTCCTGTTTGATGATCTGGGCATTCCACAAGATTACAGG
CACATGGATGGTTTCGGTGTTAATACCTACATGCTGATCAACAAAGCTGGGAAAGCACAG
TATGTGAAATTCCATTGGAAGCCAACTTGTGGAGTCAAATGCTTGTTGGATGAAGAAGCT
ATTAAGGTCGGTGGAGCAAATCATAGTCATGCCACCAAGGATCTCTATGATTCAATTTCT
GCTGGGAACTATCCAGAGTGGAAACTGTTCATCCAAACTATTGATCCTGATCATGAAGAC
AGATTCGACTTTGACCCCTTAGATGTAACCAAGATCTGGCCTGAGGACATCTTGCCATTA
CAGCCAGTTGGTCGCTTGGTATTGAATAAGAACATCGATAACTTCTTTGCAGAGAATGAG
CAGCTTGCTTTTTGCCCTGCCATTATTGTCCCTGGTGTTTACTATTCGGATGATAAGCTT
CTCCAAACTAGGGTATTCTCATATGCTGATACCCAGAGACACCGCCTTGGTCCAAACTAT
CTGCAGCTCCCAGTTAATGCTCCCAAGTGTGCTCATCACAATAATCACCATGAAGGTTTC
ATGAATTTCATGCACCGTGATGAAGAGGTCAACTATTTCCCCTCAAGGCTTGATCCTTGT
CGTCATGCAGAGCAGTACCCTATTCCTCCTCGTGTCTTGACAGGAAAACGCGAAAAGGTC
ATCATTGAGAAAGAGAACAACTTTAAGCAGCCAGGAGAACATTACAGATCTTGGGCACCG
GGCAGGCAAGAAAGATTTGTGTGCAGATGGGTTGATGCTCTATCTGATCTTCGTGCCACT
CATGAAATTCGCAGTATTTGGATCTCATACTGGTCACAGGCTGACAAGTCTCTTGGTCAG
AAGCTCGCGTCTCGTCTCAATATAAGGCCTACAATGTGA