Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025644
CDS Infomation

pacid=37475280 polypeptide=PGSC0003DMP400017475 locus=PGSC0003DMG400009902 ID=PGSC0003DMT400025644.v4.03 annot-version=v4.03
Sequence

ATGGCGAACTGGTCAGAACTTCCATACGAACTACTTGCTATGATAGCAAAGCGTGTTACA
GCGATGGAGGATTTCATTAGATTTGGTTTTGTTTGTAAATCATGGAGAAGTGCTGGTACC
AAAGAGAATTTTGATGTGTTAGCGCCTCAAGTTCCTTTGCTTATGCTGGCTGCTTATGTG
AACGATGATTATCGGAAATTCTACTCTCTTTCCAAGGAGAAAATTTCTTGCAGAGTTTTC
CTCCCAGAAGCTAGAGGGAGACTGTGTTTTCCAACACAGGGATGGCTTTTCACGGTGAAC
TATAGGACAAGTACAGGAGAGATGACTTTGTTGCACCCTTTTTCACGCGCCCAAATTCAG
CTTCCTCCGTCTACTGGCTTGAGAGATCAGAGATCAAAACGTTTCTATGTGACAATCGAC
CATGTTGTATTATCTGCTAGCCCATCCCTAACATCTGACTATGTTCTGATAATTTGTTAT
AGTCGCCCTACATACCGTTTTGCTTTTTGGCGACCTGGAGACCTCTGTTGGACCAAAATT
CCTATTCTTGAAGAGACCGGTGCATTTTACCATATGCAATACTTCAATGGACAACTTTAT
GTCAACCATGGGCGGTGGGTCTCAGTTATTGACATCCCAGAGCCTAGCAATCCTCAGCCT
GTTGTAAAACCACGAGAGGTTGTTGAGATACATGATCTATCGATTGATGCAAGCCGGTAC
TTTCTCATTGAAGTGTCAGGTGAGCTGTTATTTGTTCAACAATTGATGATTACAGAAGAT
GCATCAAATGGGTGGAAGACAAATAAATTTCGACTATTCAAAATTGATGTAATCAGAGGA
GAAGCCAAAGAGATTAAAAGCTTGGGAGACAAAGCAATTTTTGTGGGGTGTAATGCATCA
ATTGCCATCGACTCTTCCAAGTTCGTTGGAGTGAAGCCTAATCATATCTATTTTACCTAT
GATTGGACATGTGTGTTCTCCCGCGGAGATGATTCGAGAGAGATAGGGGCTTACAATCTC
GAAGATGAAACCATTCAATCCTTGAATCAAGGCATTTCTGGTGTTGATCCTGTGTCCCCC
GCGATTTCGGTCTCCCCATCATTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400017475
PEP Infomation

pacid=37475280 transcript=PGSC0003DMT400025644 locus=PGSC0003DMG400009902 ID=PGSC0003DMT400025644.v4.03 annot-version=v4.03
Sequence

MANWSELPYELLAMIAKRVTAMEDFIRFGFVCKSWRSAGTKENFDVLAPQVPLLMLAAYV
NDDYRKFYSLSKEKISCRVFLPEARGRLCFPTQGWLFTVNYRTSTGEMTLLHPFSRAQIQ
LPPSTGLRDQRSKRFYVTIDHVVLSASPSLTSDYVLIICYSRPTYRFAFWRPGDLCWTKI
PILEETGAFYHMQYFNGQLYVNHGRWVSVIDIPEPSNPQPVVKPREVVEIHDLSIDASRY
FLIEVSGELLFVQQLMITEDASNGWKTNKFRLFKIDVIRGEAKEIKSLGDKAIFVGCNAS
IAIDSSKFVGVKPNHIYFTYDWTCVFSRGDDSREIGAYNLEDETIQSLNQGISGVDPVSP
AISVSPSF*

Transcript Sequence

Transcript ID

PGSC0003DMT400025644
Transcript Infomation

pacid=37475280 locus=PGSC0003DMG400009902 ID=PGSC0003DMT400025644.v4.03 annot-version=v4.03
Sequence

ATGGCGAACTGGTCAGAACTTCCATACGAACTACTTGCTATGATAGCAAAGCGTGTTACA
GCGATGGAGGATTTCATTAGATTTGGTTTTGTTTGTAAATCATGGAGAAGTGCTGGTACC
AAAGAGAATTTTGATGTGTTAGCGCCTCAAGTTCCTTTGCTTATGCTGGCTGCTTATGTG
AACGATGATTATCGGAAATTCTACTCTCTTTCCAAGGAGAAAATTTCTTGCAGAGTTTTC
CTCCCAGAAGCTAGAGGGAGACTGTGTTTTCCAACACAGGGATGGCTTTTCACGGTGAAC
TATAGGACAAGTACAGGAGAGATGACTTTGTTGCACCCTTTTTCACGCGCCCAAATTCAG
CTTCCTCCGTCTACTGGCTTGAGAGATCAGAGATCAAAACGTTTCTATGTGACAATCGAC
CATGTTGTATTATCTGCTAGCCCATCCCTAACATCTGACTATGTTCTGATAATTTGTTAT
AGTCGCCCTACATACCGTTTTGCTTTTTGGCGACCTGGAGACCTCTGTTGGACCAAAATT
CCTATTCTTGAAGAGACCGGTGCATTTTACCATATGCAATACTTCAATGGACAACTTTAT
GTCAACCATGGGCGGTGGGTCTCAGTTATTGACATCCCAGAGCCTAGCAATCCTCAGCCT
GTTGTAAAACCACGAGAGGTTGTTGAGATACATGATCTATCGATTGATGCAAGCCGGTAC
TTTCTCATTGAAGTGTCAGGTGAGCTGTTATTTGTTCAACAATTGATGATTACAGAAGAT
GCATCAAATGGGTGGAAGACAAATAAATTTCGACTATTCAAAATTGATGTAATCAGAGGA
GAAGCCAAAGAGATTAAAAGCTTGGGAGACAAAGCAATTTTTGTGGGGTGTAATGCATCA
ATTGCCATCGACTCTTCCAAGTTCGTTGGAGTGAAGCCTAATCATATCTATTTTACCTAT
GATTGGACATGTGTGTTCTCCCGCGGAGATGATTCGAGAGAGATAGGGGCTTACAATCTC
GAAGATGAAACCATTCAATCCTTGAATCAAGGCATTTCTGGTGTTGATCCTGTGTCCCCC
GCGATTTCGGTCTCCCCATCATTCTGA