Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025631
CDS Infomation

pacid=37476324 polypeptide=PGSC0003DMP400017465 locus=PGSC0003DMG400009899 ID=PGSC0003DMT400025631.v4.03 annot-version=v4.03
Sequence

ATGTTAGACTTGTCATCCAACTCAATTATCCTCAATATAACTGCAACTTGGATGCCTCCT
TTTCAACTTGACATTATTGGCCTGATGTCTTGCCAACTTGGTACACAGTTTCCTCAGTGG
CTTCATACACAAAAGGATTACTCATTTATCGATATCTCTCATGGTAGCATCTCAAATGAA
GTGCCTGATTGGTTCTGGAGTCTCTCTGCAAAGGTACAGCACATGAACCTTTCTCTCAAC
TATTTCAGAGGGGAAGTACCTCAAGTTACATCAAGACTTGATAGTCTTGAAAAACTAGAC
CTGAGCCAAAACAACTTTTCTGGTCCTTTACCTCATTTTTCGTCCAAGATGAAGATGTTG
ATTTTGTCCCGGAATTCTTTTAATGGCGCCATTTCCCCTGTATGTGAATCACTTGTCATG
AATAATTCTCTTATGTTTTTAGACCTATCGTTCAATAATCTATCAGGAACACTTTCAGAC
TGTTGGAGATATGGGAACAATCTGGCAGTATTAAAGTTAGGCTATAATAATCTGTCTGGT
GAAATACCTCATTCTTTTGGATATCTTGAAACTCTCAGGTATCTGCAACTGAAAAACAAC
AGGCTGTCCAAAAATCTGCCTTCATCACTGAAGAACCTACAAGGACTAAAAATTCTTGAT
CTTTCCGGAAATTGTTTATCTGGAAAGATACCATCTTTCTTAGGGGAGACTTCACAAAAT
CTATTGGTTCTTTTGTTAAGAAAGAACAAGTTCGATGGAAACATTCCCCTACAGATTTGC
CAGCTCAAAAACTTGATTATTTTGGACCTTAGTTCCAATTCTCTATCAGGCACCATTCCA
AAGTGTGTTAAAAATTTCCTAATGATGGCTGGGGTAGAGGAGCTCCCTTCCTTGGTTTAT
GGTCCCTATGAAGAATACAGGAAGGATGTGGCGTTGATGCTAAAAGAGAGAGGCTATGAT
TATAGTTTTGCCTTTATGGCGGTGATTGATCTATCAGATAACCATTTATCAGGGGAAATT
CCTGAGGAAATCACCACACTTGTTCAATTGCAGGTATTGAATTTATCAAGGAATAATTTA
ACTGGAGCAATTCCTTGTAAGATTAGTAAAATGCAATCTTTGGAAGCTCTTGATGTTTCC
TGGAATCGTCTGTCATCCTTCTTGCCTTCCAGCATAGTGGAGCTTTCCAGGCTCGAGATC
GCGAATTTTTCGTTCAATAGTTTGACAGGAAAAATTCCAATAGGTGGTCAATTTTTAACC
TTTGAAAATAGTTCTTATATTGGGAATCCAGATTTGTGTGGCATGCCACTTTCCAAAAGC
TGCTCGGGACATTTTCTTGAGGACATTACTCACTGTAACTCTCCCAAGAAAAAAGACGTG
CAGGCCATTCATCAGCATGAGGAAGACAATTGGCTTGATGAATCATCATTCTATATCAGC
ATGGTAATTGGTTTCATCACAAGTTTCTGGTTATTTTGGGCTACTCTATTAGTGAAAACA
TCTTGGAGACATTCCTATATGAGGTATCTTAATAAAATGGGCAACAATATTTATGTGTTT
GTAGCCATAAGATTACCAAATAAGCATAAACCATCAAAGATGAAAGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400017465
PEP Infomation

pacid=37476324 transcript=PGSC0003DMT400025631 locus=PGSC0003DMG400009899 ID=PGSC0003DMT400025631.v4.03 annot-version=v4.03
Sequence

MLDLSSNSIILNITATWMPPFQLDIIGLMSCQLGTQFPQWLHTQKDYSFIDISHGSISNE
VPDWFWSLSAKVQHMNLSLNYFRGEVPQVTSRLDSLEKLDLSQNNFSGPLPHFSSKMKML
ILSRNSFNGAISPVCESLVMNNSLMFLDLSFNNLSGTLSDCWRYGNNLAVLKLGYNNLSG
EIPHSFGYLETLRYLQLKNNRLSKNLPSSLKNLQGLKILDLSGNCLSGKIPSFLGETSQN
LLVLLLRKNKFDGNIPLQICQLKNLIILDLSSNSLSGTIPKCVKNFLMMAGVEELPSLVY
GPYEEYRKDVALMLKERGYDYSFAFMAVIDLSDNHLSGEIPEEITTLVQLQVLNLSRNNL
TGAIPCKISKMQSLEALDVSWNRLSSFLPSSIVELSRLEIANFSFNSLTGKIPIGGQFLT
FENSSYIGNPDLCGMPLSKSCSGHFLEDITHCNSPKKKDVQAIHQHEEDNWLDESSFYIS
MVIGFITSFWLFWATLLVKTSWRHSYMRYLNKMGNNIYVFVAIRLPNKHKPSKMKD*

Transcript Sequence

Transcript ID

PGSC0003DMT400025631
Transcript Infomation

pacid=37476324 locus=PGSC0003DMG400009899 ID=PGSC0003DMT400025631.v4.03 annot-version=v4.03
Sequence

ATGTTAGACTTGTCATCCAACTCAATTATCCTCAATATAACTGCAACTTGGATGCCTCCT
TTTCAACTTGACATTATTGGCCTGATGTCTTGCCAACTTGGTACACAGTTTCCTCAGTGG
CTTCATACACAAAAGGATTACTCATTTATCGATATCTCTCATGGTAGCATCTCAAATGAA
GTGCCTGATTGGTTCTGGAGTCTCTCTGCAAAGGTACAGCACATGAACCTTTCTCTCAAC
TATTTCAGAGGGGAAGTACCTCAAGTTACATCAAGACTTGATAGTCTTGAAAAACTAGAC
CTGAGCCAAAACAACTTTTCTGGTCCTTTACCTCATTTTTCGTCCAAGATGAAGATGTTG
ATTTTGTCCCGGAATTCTTTTAATGGCGCCATTTCCCCTGTATGTGAATCACTTGTCATG
AATAATTCTCTTATGTTTTTAGACCTATCGTTCAATAATCTATCAGGAACACTTTCAGAC
TGTTGGAGATATGGGAACAATCTGGCAGTATTAAAGTTAGGCTATAATAATCTGTCTGGT
GAAATACCTCATTCTTTTGGATATCTTGAAACTCTCAGGTATCTGCAACTGAAAAACAAC
AGGCTGTCCAAAAATCTGCCTTCATCACTGAAGAACCTACAAGGACTAAAAATTCTTGAT
CTTTCCGGAAATTGTTTATCTGGAAAGATACCATCTTTCTTAGGGGAGACTTCACAAAAT
CTATTGGTTCTTTTGTTAAGAAAGAACAAGTTCGATGGAAACATTCCCCTACAGATTTGC
CAGCTCAAAAACTTGATTATTTTGGACCTTAGTTCCAATTCTCTATCAGGCACCATTCCA
AAGTGTGTTAAAAATTTCCTAATGATGGCTGGGGTAGAGGAGCTCCCTTCCTTGGTTTAT
GGTCCCTATGAAGAATACAGGAAGGATGTGGCGTTGATGCTAAAAGAGAGAGGCTATGAT
TATAGTTTTGCCTTTATGGCGGTGATTGATCTATCAGATAACCATTTATCAGGGGAAATT
CCTGAGGAAATCACCACACTTGTTCAATTGCAGGTATTGAATTTATCAAGGAATAATTTA
ACTGGAGCAATTCCTTGTAAGATTAGTAAAATGCAATCTTTGGAAGCTCTTGATGTTTCC
TGGAATCGTCTGTCATCCTTCTTGCCTTCCAGCATAGTGGAGCTTTCCAGGCTCGAGATC
GCGAATTTTTCGTTCAATAGTTTGACAGGAAAAATTCCAATAGGTGGTCAATTTTTAACC
TTTGAAAATAGTTCTTATATTGGGAATCCAGATTTGTGTGGCATGCCACTTTCCAAAAGC
TGCTCGGGACATTTTCTTGAGGACATTACTCACTGTAACTCTCCCAAGAAAAAAGACGTG
CAGGCCATTCATCAGCATGAGGAAGACAATTGGCTTGATGAATCATCATTCTATATCAGC
ATGGTAATTGGTTTCATCACAAGTTTCTGGTTATTTTGGGCTACTCTATTAGTGAAAACA
TCTTGGAGACATTCCTATATGAGGTATCTTAATAAAATGGGCAACAATATTTATGTGTTT
GTAGCCATAAGATTACCAAATAAGCATAAACCATCAAAGATGAAAGATTGA