Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025563
CDS Infomation

pacid=37474668 polypeptide=PGSC0003DMP400017413 locus=PGSC0003DMG400009878 ID=PGSC0003DMT400025563.v4.03 annot-version=v4.03
Sequence

ATGCAACAAGGCGATTACACAACCTCTAATCCCTACTACAATTACCCTAATTCCGGCCAA
ATCTCGCCGGCTCCGATCCCAAACCCCACCCCTTCACCACCGGCATACGCTTCTGCTCCG
CCGTTCGCCGCCACTTACACTCCGCCTTCAGATTACTCATCTTATCCCTCTTCTTACCCC
AATCATTATACCCAAAATCCCGATTTTCCCTCCACTGCTCCAGCACCTCCGTTACAGACC
TACAATCCTCCACCACCAGCGCAGGTTCCGGTTCCGGCGTTGCAACAGCCTCAGCACTCC
TCTCCGTTTCCCTCGTTTGAATCCCACGGAGCTTATCAAAACCCAGTTCATTCTCAGCCT
CAACAATCTTATTATCCTCCTTACGATCAGCCCCAGGCTGCTCCTAGTTACAATCACAGT
CCCACTCCGAATTCTTCGTATCCTTCAGTTTATTCAACTCCGAATTATGATAATACTGGG
AAGTTTGATCAAAGTGGACAGTATTTTGATGAACCTGTGGATAAATATGGGAATTATGGT
TCGCGGAGAGGTGAATTTGGGCAAGATACTTATGGGAAACGAGCTGAAAGTGGATATGGT
AATGATGGTTATGGTGATGGAGTGTTTGCTTATCAGGGTAGTAAAGTAGAGCCTTATGGG
GCACGAGGGACTGGTTCAAAGTCTTCGACTTGGTCGTCTAGTTTTGATGATTTTGGGAGG
CCAATTGGGTATAATTCTCCGAAAGAACGTTCATCAGCTCCAACTGCGAAGATCGTCAAG
GCAATTCCCAAGGTTGATACGCAGCAGGATGCGAGAAGTGGTGTGCAGAAGTTTAGGGTG
AAGTTACTAGCTGAAAGTGGTGGACAGAGTACCCAAGATGTTCTTTGCCAGATTGGCTTG
GATGGAATCCGCATGTTGGACCCAAGCACTAGCCGGATGTTAAGAATTTATCCTCTTGAC
ACGGTAACTAGACTTGAGGCGGCGGATTCATCTACCTTTGCCTTCTGGTCAAAAAGTGCA
GTGGATATAGAACCAAGGCGTATCAGACTGCAGTCAAACAGTTACACAACCAGTTCCCTA
TTAGATACAGTCACGGCTGCAGTTGTACAGTTCAAGGAGATGGGTGGAAGAATCAGGTCT
TCTGAATCTCCAAAGGTGGCTGAACAGCCTACTGAGAAGAAGAAAGGTCTTGCTGATTGG
ATTAATATAGTGAAGACCGTCAATGAGGAGAAAGATCACTGGGTTCCTGATGAAGCAGTT
TCCAAGTGCACAGCTTGTGGATCAGCCTTCAATGCCTTTGTGCGCAGGCATCACTGTCGG
AATTGTGGAGATATTTTCTGTGACAAATGCACTCAGGGAAGAACTGCACTGACAGCTGAT
GAGAATGCACCAGTTGTTAGAGTTTGTGACCGATGTACGGCTGAGGTTTCTCGGCGGCTA
AGCAGCGCGAAGGAAACTGTCAATAGATCAACTGGATTGCAAAGTCATGAAGACCTTGCC
AAGAAGCTTCAGGAGGAGATGGAGAGAAACCGAAAAGGATCATCTGGCTCCAGACAAGAT
CGTTCGGGGAGGATGAAAGAGGTTGCTTGCCCTACTTGTACAGTACATTTGCAGGTTCAA
GTTCCAAGCTCAGGTTCCGAGACTATAGAATGTGGGGTTTGCCAGAATCCATTCCTCGTT
AGTTCGCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400017413
PEP Infomation

pacid=37474668 transcript=PGSC0003DMT400025563 locus=PGSC0003DMG400009878 ID=PGSC0003DMT400025563.v4.03 annot-version=v4.03
Sequence

MQQGDYTTSNPYYNYPNSGQISPAPIPNPTPSPPAYASAPPFAATYTPPSDYSSYPSSYP
NHYTQNPDFPSTAPAPPLQTYNPPPPAQVPVPALQQPQHSSPFPSFESHGAYQNPVHSQP
QQSYYPPYDQPQAAPSYNHSPTPNSSYPSVYSTPNYDNTGKFDQSGQYFDEPVDKYGNYG
SRRGEFGQDTYGKRAESGYGNDGYGDGVFAYQGSKVEPYGARGTGSKSSTWSSSFDDFGR
PIGYNSPKERSSAPTAKIVKAIPKVDTQQDARSGVQKFRVKLLAESGGQSTQDVLCQIGL
DGIRMLDPSTSRMLRIYPLDTVTRLEAADSSTFAFWSKSAVDIEPRRIRLQSNSYTTSSL
LDTVTAAVVQFKEMGGRIRSSESPKVAEQPTEKKKGLADWINIVKTVNEEKDHWVPDEAV
SKCTACGSAFNAFVRRHHCRNCGDIFCDKCTQGRTALTADENAPVVRVCDRCTAEVSRRL
SSAKETVNRSTGLQSHEDLAKKLQEEMERNRKGSSGSRQDRSGRMKEVACPTCTVHLQVQ
VPSSGSETIECGVCQNPFLVSSH*

Transcript Sequence

Transcript ID

PGSC0003DMT400025563
Transcript Infomation

pacid=37474668 locus=PGSC0003DMG400009878 ID=PGSC0003DMT400025563.v4.03 annot-version=v4.03
Sequence

ATGCAACAAGGCGATTACACAACCTCTAATCCCTACTACAATTACCCTAATTCCGGCCAA
ATCTCGCCGGCTCCGATCCCAAACCCCACCCCTTCACCACCGGCATACGCTTCTGCTCCG
CCGTTCGCCGCCACTTACACTCCGCCTTCAGATTACTCATCTTATCCCTCTTCTTACCCC
AATCATTATACCCAAAATCCCGATTTTCCCTCCACTGCTCCAGCACCTCCGTTACAGACC
TACAATCCTCCACCACCAGCGCAGGTTCCGGTTCCGGCGTTGCAACAGCCTCAGCACTCC
TCTCCGTTTCCCTCGTTTGAATCCCACGGAGCTTATCAAAACCCAGTTCATTCTCAGCCT
CAACAATCTTATTATCCTCCTTACGATCAGCCCCAGGCTGCTCCTAGTTACAATCACAGT
CCCACTCCGAATTCTTCGTATCCTTCAGTTTATTCAACTCCGAATTATGATAATACTGGG
AAGTTTGATCAAAGTGGACAGTATTTTGATGAACCTGTGGATAAATATGGGAATTATGGT
TCGCGGAGAGGTGAATTTGGGCAAGATACTTATGGGAAACGAGCTGAAAGTGGATATGGT
AATGATGGTTATGGTGATGGAGTGTTTGCTTATCAGGGTAGTAAAGTAGAGCCTTATGGG
GCACGAGGGACTGGTTCAAAGTCTTCGACTTGGTCGTCTAGTTTTGATGATTTTGGGAGG
CCAATTGGGTATAATTCTCCGAAAGAACGTTCATCAGCTCCAACTGCGAAGATCGTCAAG
GCAATTCCCAAGGTTGATACGCAGCAGGATGCGAGAAGTGGTGTGCAGAAGTTTAGGGTG
AAGTTACTAGCTGAAAGTGGTGGACAGAGTACCCAAGATGTTCTTTGCCAGATTGGCTTG
GATGGAATCCGCATGTTGGACCCAAGCACTAGCCGGATGTTAAGAATTTATCCTCTTGAC
ACGGTAACTAGACTTGAGGCGGCGGATTCATCTACCTTTGCCTTCTGGTCAAAAAGTGCA
GTGGATATAGAACCAAGGCGTATCAGACTGCAGTCAAACAGTTACACAACCAGTTCCCTA
TTAGATACAGTCACGGCTGCAGTTGTACAGTTCAAGGAGATGGGTGGAAGAATCAGGTCT
TCTGAATCTCCAAAGGTGGCTGAACAGCCTACTGAGAAGAAGAAAGGTCTTGCTGATTGG
ATTAATATAGTGAAGACCGTCAATGAGGAGAAAGATCACTGGGTTCCTGATGAAGCAGTT
TCCAAGTGCACAGCTTGTGGATCAGCCTTCAATGCCTTTGTGCGCAGGCATCACTGTCGG
AATTGTGGAGATATTTTCTGTGACAAATGCACTCAGGGAAGAACTGCACTGACAGCTGAT
GAGAATGCACCAGTTGTTAGAGTTTGTGACCGATGTACGGCTGAGGTTTCTCGGCGGCTA
AGCAGCGCGAAGGAAACTGTCAATAGATCAACTGGATTGCAAAGTCATGAAGACCTTGCC
AAGAAGCTTCAGGAGGAGATGGAGAGAAACCGAAAAGGATCATCTGGCTCCAGACAAGAT
CGTTCGGGGAGGATGAAAGAGGTTGCTTGCCCTACTTGTACAGTACATTTGCAGGTTCAA
GTTCCAAGCTCAGGTTCCGAGACTATAGAATGTGGGGTTTGCCAGAATCCATTCCTCGTT
AGTTCGCACTGA